NO22G01110, NO22G01110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01110 vs. NCBI_GenBank
Match: XP_005853627.1 (hypothetical protein NGA_0430401 [Nannochloropsis gaditana CCMP526] >EKU22738.1 hypothetical protein NGA_0430401 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 220.3 bits (560), Expect = 7.000e-54 Identity = 96/119 (80.67%), Postives = 109/119 (91.60%), Query Frame = 0 Query: 123 IQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVAEK 242 +Q+SR+DTVRFG +VEEEKDRCLE F FARPLC+ LR QG WADFIDPCSGLPM+TPHCTRPY+EVAGFEHLLRY TQNAGCCKILLHPRWGSSCYPATIFTTAP++ V+AAI++ E+ Sbjct: 1 MQKSRLDTVRFGPEVEEEKDRCLERFVAFARPLCQGLRGQGFWADFIDPCSGLPMLTPHCTRPYSEVAGFEHLLRYKTQNAGCCKILLHPRWGSSCYPATIFTTAPVKTVRAAIQMLER 119
BLAST of NO22G01110 vs. NCBI_GenBank
Match: GAQ88723.1 (hypothetical protein KFL_004540080 [Klebsormidium nitens]) HSP 1 Score: 160.6 bits (405), Expect = 6.600e-36 Identity = 74/125 (59.20%), Postives = 88/125 (70.40%), Query Frame = 0 Query: 117 LLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVAEK 242 LLI+PT Q S VD VR G +EEEKDR LE F DFA+ +CE L SQGHWAD++DP SGLPM+ Y+EV LL YT QNAGCCK++LHP+WGSS YPAT+F APLE V AI ++ Sbjct: 47 LLIIPTCQNSEVDLVRTGEVIEEEKDRLLEIFVDFAKQVCELLISQGHWADYLDPASGLPMIHKDTNTVYSEVDALSTLLHYTCQNAGCCKVILHPKWGSSVYPATLFAKAPLEVVLEAINKVDE 171
BLAST of NO22G01110 vs. NCBI_GenBank
Match: XP_005851808.1 (hypothetical protein CHLNCDRAFT_133264 [Chlorella variabilis] >EFN59706.1 hypothetical protein CHLNCDRAFT_133264 [Chlorella variabilis]) HSP 1 Score: 154.5 bits (389), Expect = 4.700e-34 Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 0 Query: 117 LLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVA 240 +L++PT Q +++D V+ G VE+EKDR LE F +FA+ +CE L + GHWAD+IDPCSGLPM+ Y EV G LL Y TQNAGCCKI+LHP+WGS+ YPA++F APL V AAI+ A Sbjct: 41 MLVIPTCQHAQMDLVQMGQRVEDEKDRLLERFVEFAKTVCERLAALGHWADYIDPCSGLPMVHRATNAVYGEVEGLVTLLGYRTQNAGCCKIILHPKWGSNVYPASLFAKAPLAAVVAAIEEA 163
BLAST of NO22G01110 vs. NCBI_GenBank
Match: PSC75053.1 (Methylmalonic aciduria and homocystinuria type D mitochondrial [Micractinium conductrix]) HSP 1 Score: 153.3 bits (386), Expect = 1.100e-33 Identity = 72/145 (49.66%), Postives = 93/145 (64.14%), Query Frame = 0 Query: 117 LLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVAEKGEAWREGGIGMRRVMEPAGV 262 +L++PT Q ++VD V+ G VE EKDR LE F +FA+ +CE L + GHWAD+IDPCSGLPM+ Y EV LL Y TQNAGCCKI+LHP WGSS YPA++F AP+ A +G+A EG +G R + G+ Sbjct: 1 MLVIPTCQHAQVDLVQMGEKVETEKDRLLERFVEFAKVVCERLAAAGHWADYIDPCSGLPMINRATNAVYGEVEALVTLLGYKTQNAGCCKIILHPCWGSSVYPASLFAKAPV--------AAAQGQAAEEGMVGRRLLQAAMGL 137
BLAST of NO22G01110 vs. NCBI_GenBank
Match: XP_013893335.1 (hypothetical protein MNEG_13646 [Monoraphidium neglectum] >KIY94315.1 hypothetical protein MNEG_13646 [Monoraphidium neglectum]) HSP 1 Score: 152.5 bits (384), Expect = 1.800e-33 Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0 Query: 117 LLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVAEK 242 LL++PT Q + +D V+ G V++EKDR LE F +A +C L + GHW D+IDPCSGLPM+ PY+EV G LL Y T NAGCCK++LHP+WG+S YPAT+F AP E +QAAIK AE+ Sbjct: 17 LLVVPTCQHATLDLVKTGEAVDDEKDRLLERFMKWAVAVCARLLAAGHWCDYIDPCSGLPMIHQESQTPYSEVEGLSLLLGYKTANAGCCKVVLHPKWGTSVYPATLFARAPFEALQAAIKGAEE 141
BLAST of NO22G01110 vs. NCBI_GenBank
Match: GAX79736.1 (hypothetical protein CEUSTIGMA_g7177.t1 [Chlamydomonas eustigma]) HSP 1 Score: 151.8 bits (382), Expect = 3.100e-33 Identity = 74/136 (54.41%), Postives = 94/136 (69.12%), Query Frame = 0 Query: 116 QLLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVAEKGEA-WREGGI 251 +LLI+PT QRS +D V+ G +V+ EKDR LE F ++ +C+ L QGHWADFIDPCSGL M+ + Y+EV L Y T NAGCCK+LLHP WGSS YPAT+FT APL+ + +AIK AE EA +E G+ Sbjct: 39 KLLIVPTCQRSVMDLVQTGEEVDVEKDRLLERFMVWSETVCKILSDQGHWADFIDPCSGLAMIHKDSQQVYSEVEALSVLKGYKTANAGCCKVLLHPHWGSSVYPATMFTCAPLDALLSAIKQAEVSEAVLKEAGL 174
BLAST of NO22G01110 vs. NCBI_GenBank
Match: PRW60433.1 (ATP-dependent RNA helicase DDX1 [Chlorella sorokiniana]) HSP 1 Score: 150.2 bits (378), Expect = 8.900e-33 Identity = 65/114 (57.02%), Postives = 84/114 (73.68%), Query Frame = 0 Query: 117 LLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLE 231 +L++PT Q++++D V+ G VE+EKDR LE F +FA+ +CE L + GHWAD+IDPCSGLPM+ Y EV LL Y TQNAGCCKI+LHP+WGSS YPA++F APLE Sbjct: 44 MLVIPTCQQAQMDLVQMGQKVEDEKDRLLERFVEFAKVVCERLAAAGHWADYIDPCSGLPMVHRGTNAVYGEVEALVTLLGYKTQNAGCCKIILHPKWGSSVYPASMFAKAPLE 157
BLAST of NO22G01110 vs. NCBI_GenBank
Match: EJK47732.1 (hypothetical protein THAOC_33529 [Thalassiosira oceanica]) HSP 1 Score: 149.8 bits (377), Expect = 1.200e-32 Identity = 67/113 (59.29%), Postives = 83/113 (73.45%), Query Frame = 0 Query: 117 LLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPL 230 LL +PT QRSR D V G +E EKDR L F DF + +CE++RS+G+WAD+IDPCSGLPM++ +C + Y+EV G E LL Y NAG CKIL HPRWGS+ YPATIF AP+ Sbjct: 67 LLAIPTNQRSREDLVAVGDHIEAEKDRLLNVFLDFGKFVCENIRSKGYWADYIDPCSGLPMISLNCNKVYSEVDGMECLLNYRAYNAGFCKILTHPRWGSAVYPATIFAYAPV 179
BLAST of NO22G01110 vs. NCBI_GenBank
Match: XP_012199898.1 (hypothetical protein SPRG_05933 [Saprolegnia parasitica CBS 223.65] >KDO29396.1 hypothetical protein SPRG_05933 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 149.8 bits (377), Expect = 1.200e-32 Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 0 Query: 37 PRLLMNGIELSIHTCTKSMAREVRYIFPHLSLNSNTGANRSGDKARVPAELHATITMPSTEIGVAGGLEKRRQDEERRGQLLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAI 237 P + +G+E+S+H C +++ RE+ ++FP AT+ S +GV T QR+ VD +FG + ++EKDR LE FA +A+ + ++ + GHWADFIDPCSGLPM+ + ++ Y+EV G E LL Y+ +AG CKILLHP WG++ YPA++FTTAP + V A I Sbjct: 26 PTMTSSGLEVSVHECPRALLRELVHVFP------------------------ATLKKDSAVLGVV--------------------TCQRACVDLAQFGSEADKEKDRLLENFARWAQDVATAILASGHWADFIDPCSGLPMLAMNSSKVYSEVDGVEVLLHYSCLSAGMCKILLHPEWGAAVYPASLFTTAPYDVVHAII 181
BLAST of NO22G01110 vs. NCBI_GenBank
Match: PNW85495.1 (hypothetical protein CHLRE_03g189200v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 148.7 bits (374), Expect = 2.600e-32 Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 0 Query: 116 QLLILPTIQRSRVDTVRFGVDVEEEKDRCLEYFADFARPLCESLRSQGHWADFIDPCSGLPMMTPHCTRPYNEVAGFEHLLRYTTQNAGCCKILLHPRWGSSCYPATIFTTAPLENVQAAIKVAEKGE 244 QLLI+PT Q + VD V G VE EKDR LE F +A+ +C+ L + GHWAD+IDPCSGLPM+ Y EV+ L+ Y T NAGCCK+LLHP WGS+ YPA++FT APL+ + AAI+VA + Sbjct: 39 QLLIVPTCQHAIVDLVNTGERVEGEKDRLLERFMAWAKVVCDQLSTAGHWADYIDPCSGLPMIHTDLNVVYPEVSALSVLMGYQTSNAGCCKVLLHPAWGSAVYPASLFTEAPLDALLAAIQVANASQ 166 The following BLAST results are available for this feature:
BLAST of NO22G01110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01110 ID=NO22G01110|Name=NO22G01110|organism=Nannochloropsis oceanica|type=gene|length=795bpback to top protein sequence of NO22G01110.1 >NO22G01110.1-protein ID=NO22G01110.1-protein|Name=NO22G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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