NO22G01100, NO22G01100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G01100 vs. NCBI_GenBank
Match: XP_005853622.1 (small subunit ribosomal protein S11e [Nannochloropsis gaditana CCMP526] >EKU22733.1 small subunit ribosomal protein S11e [Nannochloropsis gaditana CCMP526] >EWM21461.1 40s ribosomal protein [Nannochloropsis gaditana]) HSP 1 Score: 326.2 bits (835), Expect = 6.100e-86 Identity = 159/176 (90.34%), Postives = 166/176 (94.32%), Query Frame = 0 Query: 1 MVAEKGVKRGAYKEADQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAINQALSIKKQFRVF 177 MVAEK KRG Y+EADQHEKAYQVQKGVFMFGK+ SRKEGS RSKHGARWT+EVGLGFKTPKEAK GTYVDKKCPFTG+VSIRGRILKGIVLSTKM RT+IIRRDYLHWVSKY RFEKRHKNLAAH SPAFPQ+KEGDIVTVGQCRPLSKTVRFNVL HEP+INQALSIKKQFRVF Sbjct: 1 MVAEKVSKRGGYREADQHEKAYQVQKGVFMFGKSSSRKEGSKRSKHGARWTREVGLGFKTPKEAKAGTYVDKKCPFTGSVSIRGRILKGIVLSTKMNRTIIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQVKEGDIVTVGQCRPLSKTVRFNVLQHEPSINQALSIKKQFRVF 176
BLAST of NO22G01100 vs. NCBI_GenBank
Match: XP_009033899.1 (hypothetical protein AURANDRAFT_21483 [Aureococcus anophagefferens] >XP_009042233.1 hypothetical protein AURANDRAFT_34507 [Aureococcus anophagefferens] >EGB03069.1 hypothetical protein AURANDRAFT_34507 [Aureococcus anophagefferens] >EGB11541.1 hypothetical protein AURANDRAFT_21483 [Aureococcus anophagefferens]) HSP 1 Score: 231.9 bits (590), Expect = 1.600e-57 Identity = 112/167 (67.07%), Postives = 135/167 (80.84%), Query Frame = 0 Query: 10 GAYKEADQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAINQALSIKKQFRVF 177 G ++EA+Q EKAYQ Q VF+ G ++ + +SK G R+ + VGLGFKTPK A G+YVDKKCPFTG VSIRGRILKG+V+STKM RTL+IRRDYL+W KY RFEKRHKN++ H SP F +KEGDIVTVGQCRPL+KTVRFNVL HEPA+NQ+L++KK FRVF Sbjct: 5 GTFREAEQTEKAYQKQDAVFI----GRKRALAKKSKKGMRYVRNVGLGFKTPKLALEGSYVDKKCPFTGNVSIRGRILKGMVISTKMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167
BLAST of NO22G01100 vs. NCBI_GenBank
Match: CBJ48448.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 224.2 bits (570), Expect = 3.300e-55 Identity = 112/166 (67.47%), Postives = 135/166 (81.33%), Query Frame = 0 Query: 12 YKEADQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLST-KMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAINQALSIKKQFRVF 177 Y+EA+QHEKAYQ Q +F+ K K+ ++SK G R+ K VGLGFKTPK A+ GTYVDKKCPFTG VSIRGRILKG+V+S KMT T++IRRDYLH+VSKY RFEKRHKN+ H +P + +KEGDIVT+GQCRPLSKTVRFNVL HEP IN A+S++KQFR+F Sbjct: 28 YREAEQHEKAYQKQDAIFVGAKRVLGKK-VAKSK-GMRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191
BLAST of NO22G01100 vs. NCBI_GenBank
Match: XP_002901699.1 (40S ribosomal protein S11 [Phytophthora infestans T30-4] >XP_008913503.1 archaeal ribosomal protein S17P [Phytophthora parasitica INRA-310] >XP_009516691.1 hypothetical protein PHYSODRAFT_353636 [Phytophthora sojae] >XP_009516703.1 hypothetical protein PHYSODRAFT_353660 [Phytophthora sojae] >XP_024573506.1 archaeal ribosomal protein s17p [Plasmopara halstedii] >EEY58755.1 40S ribosomal protein S11 [Phytophthora infestans T30-4] >EGZ29416.1 hypothetical protein PHYSODRAFT_353636 [Phytophthora sojae] >EGZ29428.1 hypothetical protein PHYSODRAFT_353660 [Phytophthora sojae] >ETI34812.1 archaeal ribosomal protein S17P [Phytophthora parasitica P1569] >ETI34831.1 archaeal ribosomal protein S17P [Phytophthora parasitica P1569] >ETN01176.1 archaeal ribosomal protein S17P [Phytophthora parasitica INRA-310] >ETO63572.1 archaeal ribosomal protein S17P [Phytophthora parasitica P1976] >ETO63573.1 archaeal ribosomal protein S17P [Phytophthora parasitica P1976] >ETP04670.1 archaeal ribosomal protein S17P [Phytophthora parasitica CJ01A1] >ETP32818.1 archaeal ribosomal protein S17P [Phytophthora parasitica P10297] >CEG37137.1 archaeal ribosomal protein s17p [Plasmopara halstedii]) HSP 1 Score: 211.1 bits (536), Expect = 2.900e-51 Identity = 109/165 (66.06%), Postives = 130/165 (78.79%), Query Frame = 0 Query: 13 KEADQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAI-NQALSIKKQFRVF 177 + DQ EKAYQ Q+GVF+ K + K K G R+ KEVGLGFKTPK A G YVDKKCPFTG +SIRGRILKG+VLSTKM RT+I+RRDYLH+V KY RFEKRHKN+AAH SPAF ++KEGD+VT+GQCRPL+KTVRFNVL EPA + ++++KQFR F Sbjct: 2 EHVDQTEKAYQKQQGVFLASKKFAGK------KKGPRFYKEVGLGFKTPKSAIEGQYVDKKCPFTGNISIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHLSPAF-RVKEGDVVTIGQCRPLAKTVRFNVLEVEPASETKPINVRKQFRQF 159
BLAST of NO22G01100 vs. NCBI_GenBank
Match: GAX25777.1 (small subunit ribosomal protein S11e [Fistulifera solaris] >GAX15385.1 small subunit ribosomal protein S11e [Fistulifera solaris]) HSP 1 Score: 211.1 bits (536), Expect = 2.900e-51 Identity = 111/165 (67.27%), Postives = 126/165 (76.36%), Query Frame = 0 Query: 12 YKEADQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAINQALSIKKQFRVF 177 Y E DQHEKAYQ Q VF+ K R G + +K RW K VGLG KTP A G YVDKKCPFTG VSIRGRILKG+V+STKM RT+++RRDYLH++ KY RFEKRHKN+A H SPAFP +KEGDIVTVGQCRPLSKTVRFNVL HEP + ++ KK FRVF Sbjct: 8 YVECDQHEKAYQKQDAVFVARK---RAIGGADNK-PMRWFKSVGLGIKTPAAAIEGNYVDKKCPFTGNVSIRGRILKGLVISTKMKRTIVVRRDYLHFIRKYRRFEKRHKNIAVHCSPAFP-VKEGDIVTVGQCRPLSKTVRFNVLAHEP--QRVIAGKKSFRVF 165
BLAST of NO22G01100 vs. NCBI_GenBank
Match: OWZ16673.1 (Archaeal ribosomal protein S17P [Phytophthora megakarya]) HSP 1 Score: 211.1 bits (536), Expect = 2.900e-51 Identity = 109/165 (66.06%), Postives = 130/165 (78.79%), Query Frame = 0 Query: 13 KEADQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAI-NQALSIKKQFRVF 177 + DQ EKAYQ Q+GVF+ K + K K G R+ KEVGLGFKTPK A G YVDKKCPFTG +SIRGRILKG+VLSTKM RT+I+RRDYLH+V KY RFEKRHKN+AAH SPAF ++KEGD+VT+GQCRPL+KTVRFNVL EPA + ++++KQFR F Sbjct: 2 EHVDQTEKAYQKQQGVFLASKKFAGK------KKGPRFYKEVGLGFKTPKSAIDGQYVDKKCPFTGNISIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHLSPAF-RVKEGDVVTIGQCRPLAKTVRFNVLEVEPASETKPINVRKQFRQF 159
BLAST of NO22G01100 vs. NCBI_GenBank
Match: OWZ10846.1 (Archaeal ribosomal protein S17P, partial [Phytophthora megakarya]) HSP 1 Score: 208.8 bits (530), Expect = 1.400e-50 Identity = 108/161 (67.08%), Postives = 128/161 (79.50%), Query Frame = 0 Query: 17 QHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAI-NQALSIKKQFRVF 177 Q EKAYQ Q+GVF+ K + K K G R+ KEVGLGFKTPK A G YVDKKCPFTG +SIRGRILKG+VLSTKM RT+I+RRDYLH+V KY RFEKRHKN+AAH SPAF ++KEGD+VT+GQCRPL+KTVRFNVL EPA + ++++KQFR F Sbjct: 1 QTEKAYQKQQGVFLASKKFAGK------KKGPRFYKEVGLGFKTPKSAIEGQYVDKKCPFTGNISIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHLSPAF-RVKEGDVVTIGQCRPLAKTVRFNVLEVEPASETKPINVRKQFRQF 154
BLAST of NO22G01100 vs. NCBI_GenBank
Match: KUF96518.1 (Thioredoxin [Phytophthora nicotianae]) HSP 1 Score: 207.6 bits (527), Expect = 3.200e-50 Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 0 Query: 19 EKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAI-NQALSIKKQFRVF 177 EKAYQ Q+GVF+ K + K K G R+ KEVGLGFKTPK A G YVDKKCPFTG +SIRGRILKG+VLSTKM RT+I+RRDYLH+V KY RFEKRHKN+AAH SPAF ++KEGD+VT+GQCRPL+KTVRFNVL EPA + ++++KQFR F Sbjct: 68 EKAYQKQQGVFLASKKFAGK------KKGPRFYKEVGLGFKTPKSAIEGQYVDKKCPFTGNISIRGRILKGVVLSTKMKRTIIVRRDYLHFVKKYKRFEKRHKNVAAHLSPAF-RVKEGDVVTIGQCRPLAKTVRFNVLEVEPASETKPINVRKQFRQF 219
BLAST of NO22G01100 vs. NCBI_GenBank
Match: XP_004368153.1 (ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff] >ELR25398.1 ribosomal protein S17, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 204.1 bits (518), Expect = 3.500e-49 Identity = 106/164 (64.63%), Postives = 128/164 (78.05%), Query Frame = 0 Query: 14 EADQHEKAYQVQKGVFMFGKTGSRKEGSSRSK-HGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAINQALSIKKQFRVF 177 EA Q E+A+Q Q V++ GK +R G+ K G R+TK +GLGFKTPKEA G Y+DKKCPFTG VSIRGRIL+G+V+STKM RT+I+RRDYLH+V KY RFEKRHKN+ AH SPAF +KEGD+VTVGQCRPLSKT+RFNV+ H+P Q L KK FR+F Sbjct: 2 EAAQTERAFQKQPTVYV-GK--ARVLGTKAGKGKGVRFTKNIGLGFKTPKEAIEGKYIDKKCPFTGNVSIRGRILRGVVVSTKMKRTIIVRRDYLHYVPKYNRFEKRHKNIPAHCSPAF-TLKEGDVVTVGQCRPLSKTIRFNVIAHQPQNIQGLQKKKTFRIF 161
BLAST of NO22G01100 vs. NCBI_GenBank
Match: XP_008610788.1 (40S ribosomal protein S11 [Saprolegnia diclina VS20] >XP_012199143.1 40S ribosomal protein S11 [Saprolegnia parasitica CBS 223.65] >EQC36026.1 40S ribosomal protein S11 [Saprolegnia diclina VS20] >KDO29959.1 40S ribosomal protein S11 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 202.6 bits (514), Expect = 1.000e-48 Identity = 104/162 (64.20%), Postives = 127/162 (78.40%), Query Frame = 0 Query: 16 DQHEKAYQVQKGVFMFGKTGSRKEGSSRSKHGARWTKEVGLGFKTPKEAKTGTYVDKKCPFTGTVSIRGRILKGIVLSTKMTRTLIIRRDYLHWVSKYCRFEKRHKNLAAHWSPAFPQIKEGDIVTVGQCRPLSKTVRFNVLMHEPAI-NQALSIKKQFRVF 177 +Q+EKA+Q Q GVF+ K + K K G R+ K +GLGFKTPK A G YVDKKCPFTG VSIRGRILKG+VLSTKM RT+I+RRDYLH++ KY RFEKRHKN+AAH SPAF ++KEGD+VT+GQCRPLSKTVRFNV+ E A + ++++KQFR F Sbjct: 5 EQNEKAFQKQDGVFLASKKFAGK------KSGPRFYKSIGLGFKTPKTAIEGAYVDKKCPFTGNVSIRGRILKGVVLSTKMKRTIIVRRDYLHFIKKYKRFEKRHKNVAAHVSPAF-RVKEGDVVTIGQCRPLSKTVRFNVVEVEAASETKPINVRKQFRQF 159 The following BLAST results are available for this feature:
BLAST of NO22G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G01100 ID=NO22G01100|Name=NO22G01100|organism=Nannochloropsis oceanica|type=gene|length=1560bpback to top protein sequence of NO22G01100.1 >NO22G01100.1-protein ID=NO22G01100.1-protein|Name=NO22G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=177bpback to top Synonyms
Publications
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