NO22G00910, NO22G00910 (gene) Nannochloropsis oceanica

Overview
NameNO22G00910
Unique NameNO22G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1065
Alignment locationchr22:289946..291010 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:289946..291010 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL032nonsL032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR078ngnoR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR075ngnoR075Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00910.1NO22G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00910.1NO22G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00910 ID=NO22G00910|Name=NO22G00910|organism=Nannochloropsis oceanica|type=gene|length=1065bp
ATGTGTTGGAGATGTACCAAAAGgtacactaggcaatgattaatcgccag
gtgaccatttttgcatgatagcaacgataaaattggacgcaaaaggaaga
ggggcaggaggatgaggggaaagAGGGGCAGGAGGAGGAGGAGGAGGAGG
AGGTGGAGGAGAAGAAGAGGGGGAAGAAGAGGAAGAGGAAGAAGAGGAAG
AAGAAGAGGAAGAGGAAGAAGAAGACGAACAAGAAGAAAAAGGAGGGGAG
GAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGACGAACAAGAAGGAAA
AGGAGGGGAGGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAAGACGAAC
AAGAAGGAAAAGGAGGGGAGGAAGAAGAAGAAGAGGAAGAAGAGGAGGGG
AGGAAGGGGGAGGAGGAGGGAGACGAGGAGGGGGTGGAAGGGGAAGGGGA
GGAGGAGGAGGAGGCGGTGGAAGCAGAGGAGGGGGAGGGGGGGAAGGAGG
AGGAGGAGGAGAAGGGGGAGGAGGAGGAAGGGAAAGGGGAGGAGGGGGCG
GAGACGGTGGAAGCAGAGGAGGAGGAGGAGGAGGCGGAGGAGGAGGAGGA
GAAGGAGGAGGGGGAGGAGGAGGACAAGGTAGAGGAGGAGGTCATGGGCG
GGCCATCCGAGGACTTTGTTGGTGTGACACCTGTAAACAGTTCGTGTCTC
GGGACGGCAATGGGGCACGTAACATCCTGCGGATGTACAGGAGTATGGTC
CGTGGGGAAGCTCGTCCCCATGATCTGCAGTTTGGTCAACCGCGGCAAGA
TATGCGGACACTCTATGTGTAGCGTTCTCGCTGACCTCCTCTTTTATCCT
CCTCCCCCTTCTCCTCCTGGCCCTGTGTGGGCCGTTCGGGGACTTTGCCT
CATCAAAAAACCTGTCAAAGTCGCTAGTAAAATTCGGACAAGAAATAAGG
GATGAATAGGCAACATTTTATTGTTGGAAGGCTCCCCCTCGTATGCAAGT
CCTAGAGGACGCAGGTTGCGTGCGATAGTTCTAGAGGGATGTAGGAACAA
AAAAGAACTAGGTAG
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protein sequence of NO22G00910.1

>NO22G00910.1-protein ID=NO22G00910.1-protein|Name=NO22G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bp
MCWRCTKRGAGGGGGGGGGGEEEGEEEEEEEEEEEEEEEEEDEQEEKGGE
EEEEEEEEEEEDEQEGKGGEEEEEEEEEEEEDEQEGKGGEEEEEEEEEEG
RKGEEEGDEEGVEGEGEEEEEAVEAEEGEGGKEEEEEKGEEEEGKGEEGA
ETVEAEEEEEEAEEEEEKEEGEEEDKVEEEVMGGPSEDFVGVTPVNSSCL
GTAMGHVTSCGCTGVWSVGKLVPMICSLVNRGKICGHSMCSVLADLLFYP
PPPSPPGPVWAVRGLCLIKKPVKVASKIRTRNKG*
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Synonyms
Publications