NO22G00830, NO22G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00830 vs. NCBI_GenBank
Match: XP_005855987.1 (cyclase dehydrase, partial [Nannochloropsis gaditana CCMP526] >EKU20372.1 cyclase dehydrase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 209.1 bits (531), Expect = 1.300e-50 Identity = 145/181 (80.11%), Postives = 154/181 (85.08%), Query Frame = 0 Query: 30 PPSPSISISSSSPLHTNSRTTRLQSWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREARIEASGGLDE 211 PP PS+ S S SR L SWVDTKVEIEVPA+P CYALYSQLEEHPRWSPWLRSVQFLDKV RISEWTLESRGFTVAWKA+NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TISY VPKPIAKLGDV LVK+YIE+TL SDLT +++VL+KEIRE RIEASGGLDE Sbjct: 64 PPIPSVGASPISYTRQPSRLI-LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 243
BLAST of NO22G00830 vs. NCBI_GenBank
Match: EWM21432.1 (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 209.1 bits (531), Expect = 1.300e-50 Identity = 145/181 (80.11%), Postives = 154/181 (85.08%), Query Frame = 0 Query: 30 PPSPSISISSSSPLHTNSRTTRLQSWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREARIEASGGLDE 211 PP PS+ S S SR L SWVDTKVEIEVPA+P CYALYSQLEEHPRWSPWLRSVQFLDKV RISEWTLESRGFTVAWKA+NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TISY VPKPIAKLGDV LVK+YIE+TL SDLT +++VL+KEIRE RIEASGGLDE Sbjct: 135 PPIPSVGASPISYTRQPSRLI-LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314
BLAST of NO22G00830 vs. NCBI_GenBank
Match: CBN73792.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0 Query: 54 SWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARN 119 +W+D +V +EVPAS D Y+LYS L+ P WSPWL+SVQ D+ S+W ++S G V+W A+N Sbjct: 56 AWIDEQVSLEVPASTQDAYSLYSDLQRQPEWSPWLKSVQH-DRATGTSKWVIQSNGIKVSWNAQN 119
BLAST of NO22G00830 vs. NCBI_GenBank
Match: XP_005703046.1 (cyclase/dehydrase [Galdieria sulphuraria] >EME26526.1 cyclase/dehydrase [Galdieria sulphuraria]) HSP 1 Score: 77.8 bits (190), Expect = 4.500e-11 Identity = 49/167 (29.34%), Postives = 71/167 (42.51%), Query Frame = 0 Query: 40 SSPLHTNSR----------TTRLQSWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKE 197 S+P+ T SR T W+ V+++V + LYS LE+ P WSPWLRSVQ K I+ W L +RG +V+W++RN T+ Y+VP+ + L V K++E TL DL F+ L+E Sbjct: 33 STPVWTRSRYPASVPCLLFATNEGEWLGHTVKLDVQVPSWLAFDLYSDLEKMPSWSPWLRSVQVDPKQPEIATWNLSARGLSVSWRSRNTRVERPHIIAWESLEGLPNRGSVQFQEKGDNCTQVELTVEYKVPRFLKVLLSNSFVGKFVERTLLEDLKRFRLCALRE 199
BLAST of NO22G00830 vs. NCBI_GenBank
Match: WP_017326390.1 (hypothetical protein [Synechococcus sp. PCC 7336]) HSP 1 Score: 75.9 bits (185), Expect = 1.700e-10 Identity = 42/136 (30.88%), Postives = 64/136 (47.06%), Query Frame = 0 Query: 55 WVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFK 191 W++ +I+VPAS ++L+S LE+ PRW W+ SVQ LD G +S WTL SRGFT W ++ +I+Y VP +A + + + + +E+TL +DL FK Sbjct: 5 WLEHTCQIQVPASIDRVWSLWSNLEQLPRWMKWISSVQTLD--GDLSRWTLSSRGFTFNWTSKTHTVIHQQRIEWESVDGLHNRGCLRFYDRKADGTIVRLSIAYSVPGWLAAILQIPFIDRIVESTLQADLERFK 138
BLAST of NO22G00830 vs. NCBI_GenBank
Match: WP_011431100.1 (MULTISPECIES: membrane protein [Synechococcus] >ABD00427.1 putative cyclase/dehydrase [Synechococcus sp. JA-3-3Ab] >PIK87486.1 membrane protein [Synechococcus sp. 63AY4M2] >PIK89622.1 membrane protein [Synechococcus sp. 65AY6A5] >PIK93189.1 membrane protein [Synechococcus sp. 65AY6Li] >PIK96501.1 membrane protein [Synechococcus sp. 60AY4M2] >PIK99099.1 membrane protein [Synechococcus sp. 63AY4M1] >PIL02456.1 membrane protein [Synechococcus sp. 65AY640]) HSP 1 Score: 71.2 bits (173), Expect = 4.200e-9 Identity = 41/153 (26.80%), Postives = 69/153 (45.10%), Query Frame = 0 Query: 55 WVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREARIEASGG 208 W++ ++EVP + L++ L PRW W+RSV+ LD+ +S WTL++RG T +W +R +++Y++P + K+ D V K +E+T+ +DL FK L++ A AS G Sbjct: 6 WLEHTCQVEVPVPIEQVWELWANLALMPRWMKWIRSVELLDQ--ELSRWTLDTRGLTFSWISRT-HTVVKHQHIGWQSVEGLPNRGALRFYDRKGSTIVKLSVAYKIPGLLGKILDGLFVGKVVESTIQADLERFKAYALEQAGRAADNASAG 155
BLAST of NO22G00830 vs. NCBI_GenBank
Match: OSX72755.1 (hypothetical protein BU14_0407s0019 [Porphyra umbilicalis]) HSP 1 Score: 71.2 bits (173), Expect = 4.200e-9 Identity = 69/175 (39.43%), Postives = 92/175 (52.57%), Query Frame = 0 Query: 54 SWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARN----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIRE-ARIEAS 206 +W++ + V A CY ++S LE P+WSPWL+SVQ +S W+L SRG V+W+ARN XXXXXXXXXXXXXXXXXXXX IS+ VP IA + V +Y+E TL +DL ++ V+LKE+R AR +A+ Sbjct: 52 TWIEKSATVTVEAPRDFCYTIFSDLEAQPKWSPWLKSVQVDPVDPDLSRWSLASRGVEVSWQARNTSVIRPEVIAWESLDGLPNKGAVTFVDAXXXXXXXXXXXXXXXXXXXXRAQRPVTEVTLAISFDVPAFIAAVLKSDAVGQYVEQTLLADLKRYRAVVLKEVRAVARAKAA 226
BLAST of NO22G00830 vs. NCBI_GenBank
Match: OUC14020.1 (hypothetical protein B0A82_14360 [Alkalinema sp. CACIAM 70d]) HSP 1 Score: 68.2 bits (165), Expect = 3.600e-8 Identity = 37/150 (24.67%), Postives = 65/150 (43.33%), Query Frame = 0 Query: 52 LQSWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREAR 202 + W++ V++E+P S ++L+S LE+ P W W+ SV+ +S W L S GF +W+++ T++Y VP I +L D + K +E++L +D+ F+ LK+ R R Sbjct: 1 MSDWLEHTVQVEIPTSIEHVWSLWSDLEQMPNWMKWIDSVKVRPDNPDLSVWKLASGGFEFSWQSKIVRQIHNQIIQWESVDGLPNKGAIRFYDRGAEGSIVKLTVAYSVPTVIRQLMDGLALGKVVESSLQADMNRFRDYALKDARSGR 150
BLAST of NO22G00830 vs. NCBI_GenBank
Match: WP_011432946.1 (membrane protein [Synechococcus sp. JA-2-3B'a(2-13)] >ABD02296.1 cyclase/dehydrase family protein [Synechococcus sp. JA-2-3B'a(2-13)]) HSP 1 Score: 67.8 bits (164), Expect = 4.600e-8 Identity = 40/151 (26.49%), Postives = 68/151 (45.03%), Query Frame = 0 Query: 55 WVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREARIEAS 206 W++ ++EVP + L++ L PRW W+RSV+ LD+ +S WTL++RG T +W +R +++Y++P + K+ D V K +E+T+ +DL FK L++ A AS Sbjct: 6 WLEHTCQVEVPVPIEQVWDLWANLTLMPRWMKWIRSVELLDQ--ELSRWTLDTRGLTFSWISRT-HTVVKHQHIGWSSVEGLPNRGALRFYDRKGSTIVKLSVAYKIPGILGKILDGLFVGKVVESTIQADLERFKAYALEQAGPAADNAS 153
BLAST of NO22G00830 vs. NCBI_GenBank
Match: WP_016872385.1 (membrane protein [Chlorogloeopsis fritschii]) HSP 1 Score: 66.6 bits (161), Expect = 1.000e-7 Identity = 40/150 (26.67%), Postives = 67/150 (44.67%), Query Frame = 0 Query: 52 LQSWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRISEWTLESRGFTVAWKARNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREAR 202 + W++ V++EV A ++L+S LE+ PRW W+ SV+ + IS W L++ G WK+R T+ Y +P I K+ D + K +E+TL +D+ FK+ +LK +E+R Sbjct: 1 MSDWLEHSVQVEVEAPIDVVWSLWSDLEQMPRWMKWIDSVKVPEDNPEISIWKLKTGGLEFTWKSR-ILKVIPNQIIQWESVDGLPNRGAIRFYDRHNTSIVKLTVGYAIPGIIGKIMDNLFLGKVVESTLLADMERFKEYVLKVKQESR 149 The following BLAST results are available for this feature:
BLAST of NO22G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00830 ID=NO22G00830|Name=NO22G00830|organism=Nannochloropsis oceanica|type=gene|length=633bpback to top protein sequence of NO22G00830.1 >NO22G00830.1-protein ID=NO22G00830.1-protein|Name=NO22G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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