NO22G00740, NO22G00740 (gene) Nannochloropsis oceanica

Overview
NameNO22G00740
Unique NameNO22G00740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1333
Alignment locationchr22:243440..244772 +

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Properties
Property NameValue
DescriptionThioredoxin reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:243440..244772 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0019725cellular homeostasis
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
IPR000103Pyridine_nuc-diS_OxRdtase_2
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Homology
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: EWM21431.1 (thioredoxin reductase [Nannochloropsis gaditana])

HSP 1 Score: 280.4 bits (716), Expect = 7.500e-72
Identity = 133/159 (83.65%), Postives = 143/159 (89.94%), Query Frame = 0 
Query:  177 TTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEGTSSTGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            T  +  ENV+I+GSGPAGYTAAIY ARANLKPVIFEG SSTGGQLMATTDVENFPGFP+GILGPDLMMNMRKQAARWGAELESDDV++VDL SRPF V  A GR +  HS+IIATGAVAKRL LPNE +YWSKG+TACAICDGAAPMFSGEPLAVVGGG
Sbjct:  126 TADKAAENVVIVGSGPAGYTAAIYCARANLKPVIFEGASSTGGQLMATTDVENFPGFPDGILGPDLMMNMRKQAARWGAELESDDVVSVDLSSRPFSVTGANGRCVTAHSVIIATGAVAKRLRLPNEERYWSKGITACAICDGAAPMFSGEPLAVVGGG 284
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BLAST of NO22G00740 vs. NCBI_GenBank
Match: OTG00925.1 (putative thioredoxin reductase NTRC [Helianthus annuus])

HSP 1 Score: 236.9 bits (603), Expect = 9.500e-59
Identity = 117/175 (66.86%), Postives = 141/175 (80.57%), Query Frame = 0 
Query:  166 SLRASGSDA--PTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEG---TSSTGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            SLRAS S A  PT++ ++VEN++IIGSGPAGYTAAIY+ARANLKPV+FEG       GGQLM TT+VENFPGFPEGI GPDLM  MR+QA RWGAEL  +DV  +D  +RPF V+S   R +K HSII+ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   70 SLRASASSAEQPTSSGQDVENLVIIGSGPAGYTAAIYAARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPEGITGPDLMDRMRRQAERWGAELHQEDVEFIDANNRPFTVQST-DRKVKCHSIIVATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 243
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: XP_022000460.1 (thioredoxin reductase NTRC isoform X2 [Helianthus annuus])

HSP 1 Score: 236.9 bits (603), Expect = 9.500e-59
Identity = 117/175 (66.86%), Postives = 141/175 (80.57%), Query Frame = 0 
Query:  166 SLRASGSDA--PTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEG---TSSTGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            SLRAS S A  PT++ ++VEN++IIGSGPAGYTAAIY+ARANLKPV+FEG       GGQLM TT+VENFPGFPEGI GPDLM  MR+QA RWGAEL  +DV  +D  +RPF V+S   R +K HSII+ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   70 SLRASASSAEQPTSSGQDVENLVIIGSGPAGYTAAIYAARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPEGITGPDLMDRMRRQAERWGAELHQEDVEFIDANNRPFTVQST-DRKVKCHSIIVATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 243
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: XP_006421319.1 (thioredoxin reductase NTRC [Citrus clementina] >XP_024037595.1 thioredoxin reductase NTRC [Citrus clementina] >XP_024037600.1 thioredoxin reductase NTRC [Citrus clementina] >ESR34559.1 hypothetical protein CICLE_v10004686mg [Citrus clementina])

HSP 1 Score: 235.0 bits (598), Expect = 3.600e-58
Identity = 116/177 (65.54%), Postives = 141/177 (79.66%), Query Frame = 0 
Query:  165 PSLR---ASGSDAPTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEGTSS---TGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            P+LR   AS  DA ++  + VENV+IIGSGPAGYTAAIY+ARANLKPV+FEG  +    GGQLM TT+VENFPGFP+GI GPDLM  MR+QA RWGAEL  +DV  +D++S PF VKS G R +K HSI+ ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   78 PALRVRAASSVDALSSAEKSVENVVIIGSGPAGYTAAIYAARANLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKS-GERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 253
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: ESR34560.1 (hypothetical protein CICLE_v10004686mg [Citrus clementina])

HSP 1 Score: 235.0 bits (598), Expect = 3.600e-58
Identity = 116/177 (65.54%), Postives = 141/177 (79.66%), Query Frame = 0 
Query:  165 PSLR---ASGSDAPTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEGTSS---TGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            P+LR   AS  DA ++  + VENV+IIGSGPAGYTAAIY+ARANLKPV+FEG  +    GGQLM TT+VENFPGFP+GI GPDLM  MR+QA RWGAEL  +DV  +D++S PF VKS G R +K HSI+ ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   78 PALRVRAASSVDALSSAEKSVENVVIIGSGPAGYTAAIYAARANLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKS-GERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 253
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: KDO48196.1 (hypothetical protein CISIN_1g0092241mg, partial [Citrus sinensis])

HSP 1 Score: 235.0 bits (598), Expect = 3.600e-58
Identity = 116/177 (65.54%), Postives = 141/177 (79.66%), Query Frame = 0 
Query:  165 PSLR---ASGSDAPTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEGTSS---TGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            P+LR   AS  DA ++  + VENV+IIGSGPAGYTAAIY+ARANLKPV+FEG  +    GGQLM TT+VENFPGFP+GI GPDLM  MR+QA RWGAEL  +DV  +D++S PF VKS G R +K HSI+ ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   74 PALRVRAASSVDALSSAEKSVENVVIIGSGPAGYTAAIYAARANLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKS-GERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 249
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: GAY65298.1 (hypothetical protein CUMW_240010 [Citrus unshiu] >GAY65299.1 hypothetical protein CUMW_240010 [Citrus unshiu])

HSP 1 Score: 235.0 bits (598), Expect = 3.600e-58
Identity = 116/177 (65.54%), Postives = 141/177 (79.66%), Query Frame = 0 
Query:  165 PSLR---ASGSDAPTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEGTSS---TGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            P+LR   AS  DA ++  + VENV+IIGSGPAGYTAAIY+ARANLKPV+FEG  +    GGQLM TT+VENFPGFP+GI GPDLM  MR+QA RWGAEL  +DV  +D++S PF VKS G R +K HSI+ ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   74 PALRVRAASSVDALSSAEKSVENVVIIGSGPAGYTAAIYAARANLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKS-GERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 249
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: XP_006492934.1 (PREDICTED: thioredoxin reductase NTRC [Citrus sinensis] >XP_006492935.1 PREDICTED: thioredoxin reductase NTRC [Citrus sinensis])

HSP 1 Score: 232.3 bits (591), Expect = 2.300e-57
Identity = 115/177 (64.97%), Postives = 139/177 (78.53%), Query Frame = 0 
Query:  165 PSLR---ASGSDAPTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEGTSS---TGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            P+LR   AS  D   +  + VENV+IIGSGPAGYTAAIY+ARANLKPV+FEG  +    GGQLM TT+VENFPGFP+GI GPDLM  MR+QA RWGAEL  +DV  +D++S PF VKS G R +K HSI+ ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   78 PALRVRAASSVDVLFSAEKSVENVVIIGSGPAGYTAAIYAARANLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKS-GERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 253
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: XP_019424754.1 (PREDICTED: NADPH-dependent thioredoxin reductase 3-like [Lupinus angustifolius] >OIV92315.1 hypothetical protein TanjilG_10525 [Lupinus angustifolius])

HSP 1 Score: 232.3 bits (591), Expect = 2.300e-57
Identity = 110/173 (63.58%), Postives = 141/173 (81.50%), Query Frame = 0 
Query:  166 SLRASGSDAPTTTHEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEG---TSSTGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            ++RAS +DA T+T + VENV+I+GSGPAGYTAAIY+ARANLKPV+FEG       GGQLM TT+VENFPGFP+GI GPDLM  MR+QA RWGAEL  +DV A+D+++ PF V+S   R +K+H++I ATGA AKRL LP E ++WS+G++ACAICDGA+P+F G+ LAV+GGG
Sbjct:   38 TVRASSADATTSTGDGVENVVIVGSGPAGYTAAIYAARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELYQEDVEAIDVKNSPFTVQST-DRKVKSHTVIYATGATAKRLRLPREDEFWSRGISACAICDGASPLFKGQILAVIGGG 209
[Close]
BLAST of NO22G00740 vs. NCBI_GenBank
Match: XP_022000459.1 (thioredoxin reductase NTRC isoform X1 [Helianthus annuus])

HSP 1 Score: 232.3 bits (591), Expect = 2.300e-57
Identity = 117/176 (66.48%), Postives = 141/176 (80.11%), Query Frame = 0 
Query:  166 SLRASGSDA--PTTT-HEEVENVIIIGSGPAGYTAAIYSARANLKPVIFEG---TSSTGGQLMATTDVENFPGFPEGILGPDLMMNMRKQAARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNLPNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGG 336
            SLRAS S A  PT++  ++VEN++IIGSGPAGYTAAIY+ARANLKPV+FEG       GGQLM TT+VENFPGFPEGI GPDLM  MR+QA RWGAEL  +DV  +D  +RPF V+S   R +K HSII+ATGA AKRLNLP E ++WS+G++ACAICDGA+P+F G+ LAVVGGG
Sbjct:   70 SLRASASSAEQPTSSAGQDVENLVIIGSGPAGYTAAIYAARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPEGITGPDLMDRMRRQAERWGAELHQEDVEFIDANNRPFTVQST-DRKVKCHSIIVATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGG 244
The following BLAST results are available for this feature:
BLAST of NO22G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21431.17.500e-7283.65thioredoxin reductase [Nannochloropsis gaditana][more]
OTG00925.19.500e-5966.86putative thioredoxin reductase NTRC [Helianthus an... [more]
XP_022000460.19.500e-5966.86thioredoxin reductase NTRC isoform X2 [Helianthus ... [more]
XP_006421319.13.600e-5865.54thioredoxin reductase NTRC [Citrus clementina] >XP... [more]
ESR34560.13.600e-5865.54hypothetical protein CICLE_v10004686mg [Citrus cle... [more]
KDO48196.13.600e-5865.54hypothetical protein CISIN_1g0092241mg, partial [C... [more]
GAY65298.13.600e-5865.54hypothetical protein CUMW_240010 [Citrus unshiu] >... [more]
XP_006492934.12.300e-5764.97PREDICTED: thioredoxin reductase NTRC [Citrus sine... [more]
XP_019424754.12.300e-5763.58PREDICTED: NADPH-dependent thioredoxin reductase 3... [more]
XP_022000459.12.300e-5766.48thioredoxin reductase NTRC isoform X1 [Helianthus ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004193NSK004193Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00740.1NO22G00740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595513gene_7072Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100147g15gene9004Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00740.1NO22G00740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00740 ID=NO22G00740|Name=NO22G00740|organism=Nannochloropsis oceanica|type=gene|length=1333bp
ATGCATACTCACGAAGATAAGCACAGGCACTGGAGCGAGTCGTCCATTGG
GAAGTGGTTGTTTTTTCCTATCTACAGTCGTCGTGCGCTCGTCCGCGCCT
CCCCAGTTCGGCTTCCGTCTGTGGCTGCAACAGGAAGCAGCAACATGGCT
AATACCCGCCACACCAACAGCAGCAGgtacgttaacatacgctcaagagc
gtgattgtgtgttatcaaaatactgacatggcattttccgcttcatttcc
ttactcctactactataagATGCAGCAAGCTCCATCTCCATATAGTCCAC
TTTACTCTTCTCGCCATCCTGCCCCTCCTCCTTTCCGCTGCAGCTAGCGC
CCGTGTCAGTTCTCGGTCATTCCGACAGCAAACAAGGGAATATTCCTCCG
TAGGTTTCCTTGTCCCGTACTTGCAATCCTCCCGCAGTACCCACCACTCC
TCATCATCACCCGCAGCCGCTTCCTCCTCCTCCTCCTCCTCCTCCCCCTT
TTCCTTCTCCTCCTCCCCCTTCTCCTCCTTCTCTTTCCAGCGAGGACAGC
AGGAGCAACAGCAGGCAACAAGGCGTTTCTTCTTACCATCACTTCGGGCC
AGCGGCAGCGATGCACCAACGACCACACATGAGGAAGTGGAGAACGTTAT
AATTATCGGTTCAGGTCCGGCCGGGTACACCGCTGCCATCTACTCTGCGC
GTGCTAACCTCAAGCCTGTTATTTTTGAAGGCACATCTTCGACAGGAGGG
CAGCTTATGGCGACGACGGACGTCGAGAATTTCCCTGGCTTTCCTGAGGG
GATCTTGGGACCAGATTTGATGATGAACATGAGgtaaagagggagggaag
gaggaagaatcgagggacatacgggacgtatttgtcgagtggtattggca
tgttctcgctcgctgtgccactcttctttctattatatgtcgtgtctggt
acctcgccggaccctccgctcaatccctcctcttcttctctctttcttcc
tcccaccctcctcccctccctctccttccgtcctgcagGAAACAAGCTGC
CCGGTGGGGGGCCGAGCTCGAGAGCGACGACGTCATCGCTGTGGATCTAC
AGTCCCGTCCTTTTCATGTCAAGAGTGCCGGGGGTCGAAATCTGAAAACG
CATTCCATCATCATTGCAACGGGGGCCGTGGCGAAACGGTTGAACCTCCC
CAACGAGGTTAAGTATTGGTCGAAAGGTGTAACGGCCTGCGCCATCTGTG
ATGGCGCCGCGCCCATGTTCAGTGGAGAACCGCTCGCAGTTGTTGGGGGG
GGGATAGTGCTGCGGAAGAGGCTGTGTATTTGA
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protein sequence of NO22G00740.1

>NO22G00740.1-protein ID=NO22G00740.1-protein|Name=NO22G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bp
MHTHEDKHRHWSESSIGKWLFFPIYSRRALVRASPVRLPSVAATGSSNMA
NTRHTNSSRCSKLHLHIVHFTLLAILPLLLSAAASARVSSRSFRQQTREY
SSVGFLVPYLQSSRSTHHSSSSPAAASSSSSSSSPFSFSSSPFSSFSFQR
GQQEQQQATRRFFLPSLRASGSDAPTTTHEEVENVIIIGSGPAGYTAAIY
SARANLKPVIFEGTSSTGGQLMATTDVENFPGFPEGILGPDLMMNMRKQA
ARWGAELESDDVIAVDLQSRPFHVKSAGGRNLKTHSIIIATGAVAKRLNL
PNEVKYWSKGVTACAICDGAAPMFSGEPLAVVGGGIVLRKRLCI*
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Synonyms
Publications