NO22G00710, NO22G00710 (gene) Nannochloropsis oceanica

Overview
NameNO22G00710
Unique NameNO22G00710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2937
Alignment locationchr22:237514..240450 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:237514..240450 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00710.1NO22G00710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00710.1NO22G00710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00710 ID=NO22G00710|Name=NO22G00710|organism=Nannochloropsis oceanica|type=gene|length=2937bp
CATTGTGGATGTGTGCGTGGGAGGGAAGTTGGGGCGTGTGATAGGTACCT
TGTCTCCGGGTACAGATTGCTCTATTAGTAGTCTGTCCCGGTGGTACGAC
AATCGACTTCGACGACGGTGACGCTAGGGATCCATCAACACTCCTTACAA
AGTGGGTCTGTCAAAATCAACACGCCTGGCTGGCTGGACAGGAGTGGGCC
TCGTCTCAGAGTAATGTCGCTTGAGAAAGCCCTCCTGAGGCGTTTAGCGA
GGCGGCGATCGTCGGGAGTCGGAGTAGCAACGGCTCAGCAAGCAGGGACT
AGCGCATAGAGATAGCATTCACTTCGATCTCTTCAAAATTGTGAAGTGTC
TATGTGTAGGCGTTGGTCTAAAAAAGAGCAAACATTGCAGTCCAACTAGC
AGAGCAAGCTCCCCCTCCGGGTAACCTCATTTCGACCTCCCCCAGCCTCC
CACTTTTTCTTTCTCTCTTCACAGACTTCGCACAACATCTCCGACGAGCA
GCAGCAGGAGCAGCAGCAGGAGCAGCAGCAGCTGTACCCCTGCAAAAGTA
CCTCGAGGGGAGGCAGACCTCAACGAACATATTCTGGCGGCGACTCGGTG
TGATTTTTCTCTCAAACGCAATGGATAAGCGTATTCTCAAGAGCTACACA
CTCATGCGACCATCCGATACATGTCGTTATCACCAAGATACTAGCAATGG
CAAGCGTGACGCATGTACGCATATCTCCATGAGGAATTGGCTGCTGGGGG
CTACATCTCCGGTAGGAGAGACGGGTGGAGGCCGACGAGTTGGAGGGGGA
GGTGGTGCTGGAGAAGGAGGAAGGCGGCGGAGGAGGGAAAGGAGGAATCG
GAAACGAGCTCGGGCGAAACTTCAAACCCTTATCCCCGTAGATGGTGGCG
ACAATAAAAAACGACGACGAGCAATTCCTGACCCTGGCCATTCTGCCTCT
TCTTTCTTTTCAACAGCAGCAGCAGGAGCAGGAGAAGCAGGAGCTGTAGC
AGGAACTTCGCAACTCTCCTTTCTTTCTTCATCTTCCTCTTCCTCGTCAC
CCTCTTCCCTGTCTTCCCCGTCTTATTCTCCTCGTCGTTCCTCGCGCTCG
TTATCTACCATTTCTTCTTCTCTCTCTCCTCCGTCCCCTGCCTCCCACTC
TCCCTCCTCCCTCAACTGCACCCCCTACCAAGTTCCTTCCTCGCCTTCAT
ATCCTTGTAACCCCTCACGTCGAGGGGAGGCTTCTGGTGCATTAGTCACG
CCCTTACTTGATTTGCAAGAGGATGAGGAAGAAGAGGAAGAAGCACGGGA
TGGGAAGGCGGAGGAAGTGGAAGAAGAGGGGAGGCTTCAGAGGAAATGTG
CGGCGAGGCTTCAACGGAATTATGGGAGTGGCGGAGGACGAGGAGCAGGA
GTAGCAGGAGCAGGAGCAGCAGACGCGATAGCACATAAAGTGGAGGAGAA
GGAGAAGGAAAAGGCAGAGGAAGGAGCAGGATGGGATGAAGGAAAAGGAA
TGGATGGGCGAAAAAATGGAGGGACATGGGAACCCGATCCAGCGCAGGCG
AGGATCCGACGAGGGAGTTTAGCACACGCCCTGCGTCTACCCCCACCACA
GGCTTTTCTAGCCTCCTCCTTCTTACCAGCCTCTGCCTCTTTCCCTTCCT
CCGTCCCTCCCTCCCTCCTGGAGGTGCCGCCTGAAAGGGTACGAGCTTCT
TCGTCCAGTAGGAAAAACGTGAACGAGACGAACAGAAGCAGTAGTATCGT
TCCACCCTCCCTTCCTCCCTCGCTAGCCCCCACCCCCTTCCCCTCCGCCT
TCACCCCTCCTCCTTTTCCTCCTTCTCCAATTCGAACTCGAAGTGGGGCC
AGCAGCGGCAGCAGCAGCGGCAGCAGCAACAGCAGCACTAGCAGTAGCTG
TAATAATTTTGCCTTTGCTCTGTCGGTGGCTAAGGGCACTCCAACTGCTG
CAACTGCAGTGAAAGAGGACAACAAGGCGGGTAGTGGCAGTAACAGCAGC
AACGACAACGGTACGCGTTACAGATGCAGAATGAGTAAAACCACCACCAC
TAGCAATAGCAGCTCCGACCGACGCAGCCGCAGCAGCTGCAGTAACAGTG
CTACTGCTGCTGCTGCTACTCCTGCTGCTGCTGCTCCTCCTCCTTGCTCT
CCTCTGACCATTCCAGGACTGGCCCTCTCCCTTGTAGCTCTCTCGGTCGT
CCCCCTCCCTGATCAGCAGCAGCAACCGCAACGACAACAACAACAACAAC
AACAACAACAACGACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACGACGACGACGACAACGACGACAACCATCACAGCT
GCACCAGCCGGAGCAGCAGCAGCGGCTGCAACAGCACCACAAAGTTGCGG
ATCTATTGGGATTTTCTGATCTCTTCAAGCATTTGTTGGATGAGCTTGAG
CAGGCGCCCACTCATCCTCAGAGGCTGGCACGGGCCTACAAAATGGCGGC
GGACCTTATTCCAATTAAAGAGAAAATTATGAAGGAGCTAGGAGGGAGGG
AGGGAGAGAGGGAGGGAGAGCTTGTGAGTGCGTGAGCGTCTTCTTGGTGA
AGGAGTGGTTTGGAGTTGGAGTGGAGCAGGCGGGATTTAATCCTCAGTGG
CTGGCAAGGGCATTTAAAATGGATGTCGACCTGATTCTTCTGAGAGAAAG
GAGTGTGTGAGAGTTAGAAAGGAGGGAGGGAAGGAATGGAGTGGGGGGAG
GGGGATGAAAGAAAGAGCGAAAGCATAGGAGCAGAAGTTAGAAAAGGGAA
AGGAGAGGGAAGCCGTATCAAAATGAGATGACAATGCGCGGATAGAATAT
ATCTCACTGTCGGAACATCAGAAGGAAAAAAGCATCGGCAACGACGAAAG
AGTAACACGAAATAGGTCTTAAGGATAAGGGAAAACA
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protein sequence of NO22G00710.1

>NO22G00710.1-protein ID=NO22G00710.1-protein|Name=NO22G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=655bp
MDKRILKSYTLMRPSDTCRYHQDTSNGKRDACTHISMRNWLLGATSPVGE
TGGGRRVGGGGGAGEGGRRRRRERRNRKRARAKLQTLIPVDGGDNKKRRR
AIPDPGHSASSFFSTAAAGAGEAGAVAGTSQLSFLSSSSSSSSPSSLSSP
SYSPRRSSRSLSTISSSLSPPSPASHSPSSLNCTPYQVPSSPSYPCNPSR
RGEASGALVTPLLDLQEDEEEEEEARDGKAEEVEEEGRLQRKCAARLQRN
YGSGGGRGAGVAGAGAADAIAHKVEEKEKEKAEEGAGWDEGKGMDGRKNG
GTWEPDPAQARIRRGSLAHALRLPPPQAFLASSFLPASASFPSSVPPSLL
EVPPERVRASSSSRKNVNETNRSSSIVPPSLPPSLAPTPFPSAFTPPPFP
PSPIRTRSGASSGSSSGSSNSSTSSSCNNFAFALSVAKGTPTAATAVKED
NKAGSGSNSSNDNGTRYRCRMSKTTTTSNSSSDRRSRSSCSNSATAAAAT
PAAAAPPPCSPLTIPGLALSLVALSVVPLPDQQQQPQRQQQQQQQQQRQQ
QQQQQQQQQQQQQQQRRRRQRRQPSQLHQPEQQQRLQQHHKVADLLGFSD
LFKHLLDELEQAPTHPQRLARAYKMAADLIPIKEKIMKELGGREGEREGE
LVSA*
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Synonyms
Publications