NO22G00660, NO22G00660 (gene) Nannochloropsis oceanica

Overview
NameNO22G00660
Unique NameNO22G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3299
Alignment locationchr22:222626..225924 +

Link to JBrowse

Properties
Property NameValue
DescriptionTKL protein kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:222626..225924 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
Homology
BLAST of NO22G00660 vs. NCBI_GenBank
Match: CBJ30019.1 (serine/threonine protein kinase [Ectocarpus siliculosus])

HSP 1 Score: 242.3 bits (617), Expect = 5.200e-60
Identity = 131/313 (41.85%), Postives = 169/313 (53.99%), Query Frame = 0
Query:  438 DITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKD--------------------------------------RTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVCPTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQV 713
            DI L+E+  +G     +R RW G  VAVK +   P                         ++ EF+RE  IV  L HPN+C   GVS               L+LVY++++ G+L   LRD                                        R  D++++  DV  GM YLH  GVMHRDLKPDN+LLD   R VI DFGL   +   NDHT ETGTYR+MA EVIRHEPYS AADVYS+G+VLW++L R+QPF+G+TP+QAAF+VARQG RP +PPS P  +A LI+ CWH +   RP+F+Q+
Sbjct:  351 DIELLELAGKGRFSRTYRARWRGSTVAVKTLELPP--EVDREQEAAGAEIVGDGGGSRAVVVAEFERELHIVSNLRHPNVCGFRGVS---------VSLPHHLSLVYDFLDNGTLGDRLRDTASGXXXXXXXXXXXXXXXXXXXGGEREWGSRRGRGSEPLRPTDLLRIVTDVVNGMLYLHELGVMHRDLKPDNILLDADDRAVIADFGLSRFSHPTNDHTAETGTYRWMAPEVIRHEPYSQAADVYSFGVVLWQILARKQPFKGLTPLQAAFSVARQGLRPQIPPSAPLAVARLIRRCWHRSPDSRPSFSQI 652          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: XP_009839645.1 (TKL protein kinase [Aphanomyces astaci] >ETV70982.1 TKL protein kinase [Aphanomyces astaci])

HSP 1 Score: 240.7 bits (613), Expect = 1.500e-59
Identity = 124/291 (42.61%), Postives = 167/291 (57.39%), Query Frame = 0
Query:  434 IPFEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIRLE 723
            + F ++ L E V  G SG  + G W G +VAVK+I+ +                          +L+EF RE  +V  L HPN+    G S                 LV+EYME G+L  L+R +    D  +VA+++A GM YLH   +MHRDLK  N+LLD+ G   I DFGL C     + +D T ETGTYR+MA EVI HEPYS  ADVYS+G++LWE++ ++QPF+GMTPIQAAFAVARQ  RP+ P  TPS L +L+  CWH+N   RPTF  ++  +  +R +
Sbjct:  765 LDFSELVLREAVGTGRSGQTYAGSWRGTRVAVKVINVS-----------------HHNHSVSEEILQEFHREVAVVSRLRHPNIVLFLGAS----------IEPPKYCLVFEYMENGALTDLIRRRRTPIDFFRVAREIAMGMNYLHLCNIMHRDLKSANVLLDVFGTVKISDFGLSCVLEAGTSSDLTAETGTYRWMAPEVIGHEPYSAKADVYSFGVILWEMIGKDQPFKGMTPIQAAFAVARQSLRPAFPDVTPSCLRTLVNRCWHQNPADRPTFAAILDMLPGVRAQ 1028          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: CCA14665.1 (serine/threonine protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 236.1 bits (601), Expect = 3.700e-58
Identity = 125/299 (41.81%), Postives = 168/299 (56.19%), Query Frame = 0
Query:  424 HRGGGREGGLIPFEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIR 721
            H+   +    +   +I L + +  G SG  +   W G +VAVK++  +                          +L EFQRE  IV  L HPN+    G +                 LV+EYM  G+L  L+  +    D  Q+A+D+A GM YLH   V+HRDLK  N+L+D HG   + DFGL C     S +D T ETGTYR+MA EVIRHEPYS+ ADVYS+GIVLWE++ ++QPFRGMTPIQAAFAVARQ  RP+LP  TP+ LA  ++ CWH++   RP F+ ++ AI  I+
Sbjct:  130 HQNEVKSDWQLNISEIKLGKSIGTGRSGHTFESYWRGTRVAVKVVDCS-----------------KHSQQMAQEILNEFQREITIVSKLRHPNIVLFLGAT----------ICPPRYCLVFEYMANGTLGDLINSRKALLDFFQIAKDIAMGMNYLHLCSVIHRDLKSGNILIDSHGLIKVSDFGLSCLVDNGSTSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWEIIAKDQPFRGMTPIQAAFAVARQHARPALPKHTPAKLAEFVEYCWHQDPQRRPAFSDIIEAIPLIK 401          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: CCI39983.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 235.7 bits (600), Expect = 4.800e-58
Identity = 126/285 (44.21%), Postives = 165/285 (57.89%), Query Frame = 0
Query:  438 DITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIR 721
            +I L + +  G SG  +   W G +VAVK++  +                          +L EFQRE  IV  L HPN+    G +                 LV+EYM  G+L+ L+  +    D  Q+ +DVA GM YLH   V+HRDLK  N+L+D HG   I DFGL C     S +D T ETGTYR+MA EVIRHEPYS+ ADVYS+GIVLWE++ ++QPFRGMTPIQAAFAVARQ  RP+LP  TP+ LA  ++ CWH++   RPTF+ ++ AI  I+
Sbjct:  250 EIKLGKSIGSGRSGHTFESHWRGTRVAVKVVDCS-----------------IHTDQMAQEILNEFQREITIVSKLRHPNVILFLGAT----------ICPPRYCLVFEYMANGTLSDLIHSRRGLLDFFQIVKDVAMGMNYLHLCSVIHRDLKSGNILIDSHGLVKISDFGLSCLLDNGSTSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWEMIAKDQPFRGMTPIQAAFAVARQRARPALPKHTPAKLAEFVEYCWHQDPQRRPTFSDILEAIPIIK 507          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: XP_008872549.1 (TKL protein kinase [Aphanomyces invadans] >ETV99120.1 TKL protein kinase [Aphanomyces invadans])

HSP 1 Score: 235.0 bits (598), Expect = 8.300e-58
Identity = 122/290 (42.07%), Postives = 167/290 (57.59%), Query Frame = 0
Query:  436 FEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRT-YDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIRLE 723
            F ++ L + V  G SG  + G W G +VA+KLI+ +                          +L+EF RE  +V  L HPN+    G S                 LV+EYME G+L  L+R +     D  ++A+++A GM YLH   +MHRDLK  N+LLDM G   I DFGL C     + +D T ETGTYR+MA EVI HEPYS  ADVYSYG++LWE++ ++QPF+GMTPIQAAFAVARQ  RP+ P +TP+ L +L+  CWH+N   RPTF  ++  +  + ++
Sbjct:  489 FSELVLGKAVGTGRSGQTYSGSWRGTRVAIKLINLS-----------------HHNQSVSEEILQEFYREVAVVSRLRHPNIVLFLGAS----------IEPPQYCLVFEYMENGALTDLIRRRRAAPIDFFRIAREIAMGMNYLHLCNIMHRDLKSANVLLDMFGTVKISDFGLSCVLEAGTASDLTAETGTYRWMAPEVIGHEPYSAKADVYSYGVILWEMIGKDQPFKGMTPIQAAFAVARQNVRPAFPDTTPTCLRALVNRCWHQNPADRPTFAMILDMLPEVYVQ 751          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: OQR94815.1 (serine/threonine protein kinase [Thraustotheca clavata])

HSP 1 Score: 231.5 bits (589), Expect = 9.100e-57
Identity = 121/290 (41.72%), Postives = 164/290 (56.55%), Query Frame = 0
Query:  434 IPFEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRD-KDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIR 721
            + F ++ L + +  G SG  + G W G  +A K+I+ +                          +L EF RE  +V  L HPN+    GV+                 LV+EYME G+L  L+R  K    D  ++A+++A GM YLH   +MHRDLK  N+LLD HG   I DFGL C       +D T ETGTYR+MA EVI HEPYST ADVYSYG++LWE++ ++QPF+GM+PIQAAFAVARQ  RP+ P  TP  L +L++ CWH++   RPTF  V+  +  +R
Sbjct:  395 LSFAELHLGDAIGTGRSGQTFSGIWRGTFIAAKVINVS-----------------HHNQSLSEEILSEFYREVAVVSRLRHPNIVLFLGVA----------ISPPKYCLVFEYMENGALTDLIRQRKSSPIDFFRIAREIAMGMNYLHLCSIMHRDLKSGNVLLDAHGTVKISDFGLSCVLEIGHSSDLTAETGTYRWMAPEVIGHEPYSTKADVYSYGVILWEMIAKDQPFKGMSPIQAAFAVARQQMRPAFPAETPDGLRALVEQCWHQDPAQRPTFAHVLDTLPAVR 657          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: XP_024586790.1 (tkl protein kinase [Plasmopara halstedii] >CEG50421.1 tkl protein kinase [Plasmopara halstedii])

HSP 1 Score: 230.7 bits (587), Expect = 1.600e-56
Identity = 122/289 (42.21%), Postives = 163/289 (56.40%), Query Frame = 0
Query:  434 IPFEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVCPTI--SENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIR 721
            +   ++ L + V +G SG+ +   W G  VA K++ ++                          LL EF RE  +V  L HPN+    GV+                 LV+E+ME G+L  L+R +    D  ++  ++A GM YLH   +MHRDLK  N+L+D HG   I DFGL C     S +D T ETGTYR+MA EVIRHEPYS+ ADVYS+GIVLWELL R+QPFRG+TPIQAAFAVARQ  RP+LP  TP  +  LI+ CWH +   RP F  ++ A+  ++
Sbjct:  447 LDLNEVQLKDAVGKGRSGSTYSAWWRGTHVAAKIVDSS-----------------INTQIVGDELLNEFYREVAVVSKLRHPNIVLFLGVA----------ISPPRYCLVFEFMENGTLTDLIRARKGPIDFFRLVAEMAMGMNYLHLCSIMHRDLKSGNVLIDSHGTAKISDFGLSCVLDFGSSSDLTAETGTYRWMAPEVIRHEPYSSKADVYSFGIVLWELLARDQPFRGLTPIQAAFAVARQLMRPALPRQTPQKIGELIEHCWHHDPARRPDFGAILEALPLVK 708          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: XP_008617240.1 (TKL protein kinase [Saprolegnia diclina VS20] >EQC29266.1 TKL protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 229.6 bits (584), Expect = 3.500e-56
Identity = 120/300 (40.00%), Postives = 166/300 (55.33%), Query Frame = 0
Query:  434 IPFEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRT-YDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIRLEEGERSNEG 731
            + F ++ L + +  G SG  + G W G  +A K+I+ +                          +L EF RE  +V  L HPN+    GV+                 LV+E+M+ G+L  L+R +  T  D  ++A+++A GM YLH   +MHRDLK  N+LLD +G   I DFGL C       +D T ETGTYR+MA EVI HEPYS  ADVYSYG++LWE++ +EQPF+GM+PIQAAFAVARQ  RP  P  TP  L  L++ CWH++   RPTF Q++  +  +R +   R   G
Sbjct:  420 LSFSELHLGDAIGTGRSGQTFSGIWRGTFIAAKVINVS-----------------HHNQSLSDEILSEFYREVAVVSRLRHPNIVLFLGVA----------INPPKYCLVFEFMQSGALTDLIRQRKPTPIDFFRIAREIAMGMNYLHLCSIMHRDLKSGNVLLDAYGTVKISDFGLSCVLEIGHSSDLTAETGTYRWMAPEVIGHEPYSMKADVYSYGVILWEMIAKEQPFKGMSPIQAAFAVARQQMRPPFPKDTPESLMQLVETCWHQDPAQRPTFAQILDVLPAVRAQLTRRDYHG 692          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: GAX93204.1 (TKL protein kinase [Pythium insidiosum])

HSP 1 Score: 229.2 bits (583), Expect = 4.500e-56
Identity = 120/284 (42.25%), Postives = 160/284 (56.34%), Query Frame = 0
Query:  445 VRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVCPTISENDH--TGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIRLEEGER 727
            V  G SG  +   W G +VAVK++  +                          LL EF RE  +V  L HPN+    G +                 LV+E+M+ G+L  L+R +    D  +VA ++A GM YLH   +MHRDLK  N+LLD HG   I DFGL C       H  T ETGTYR+MA EVIRHEPYST ADVYS+G+VLWE++ ++QPFRG+TPIQAAFAVARQ  RP+LP  TP  +  L++ CWH++   RP F+ ++ A+  ++L   +R
Sbjct:  471 VGTGRSGNTYSALWRGTRVAVKVVDAS-----------------AQNAAMSEDLLNEFHREVAVVSKLRHPNIVLFLGAA----------ISPPKYCLVFEFMQNGTLTDLIRSRKAPIDFFRVATEIAMGMNYLHLCSIMHRDLKSGNVLLDAHGTVKISDFGLSCVLDMSGSHDLTAETGTYRWMAPEVIRHEPYSTKADVYSFGVVLWEMIAKDQPFRGLTPIQAAFAVARQQMRPALPRHTPLKIGELVEHCWHQDPNRRPDFSAILEALPLVKLSLKKR 727          
BLAST of NO22G00660 vs. NCBI_GenBank
Match: XP_012201659.1 (TKL protein kinase [Saprolegnia parasitica CBS 223.65] >KDO27532.1 TKL protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 228.8 bits (582), Expect = 5.900e-56
Identity = 119/292 (40.75%), Postives = 164/292 (56.16%), Query Frame = 0
Query:  434 IPFEDITLIEMVRRGHSGTLWRGRWEGKKVAVKLIHTTPPFRPPCXXXXXXXXXXXXXXXXXXRLLREFQRERVIVRGLNHPNLCRLHGVSRKDGXXXXXXXXXXVLALVYEYMEGGSLAALLRDKDRT-YDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHGRCVIGDFGLVC--PTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGIVLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWHENAVCRPTFTQVVCAIKHIRLE 723
            + F ++ L + +  G SG  + G W G  +A K+I+ +                          +L EF RE  +V  L HPN+    GV+                 LV+E+M+ G+L  L+R +  T  D  ++A+++A GM YLH   +MHRDLK  N+LLD +G   I DFGL C       +D T ETGTYR+MA EVI HEPYS  ADVYSYG++LWE+L +EQPF+GM+PIQAAFAVARQ  RP  P  TP  L  L++ CWH++   RPTF Q++  +  +R +
Sbjct:  422 LSFSELHLGDAIGTGRSGQTFSGIWRGTFIAAKVINVS-----------------HHNQSLSDEILSEFYREVAVVSRLRHPNIVLFLGVA----------INPPKYCLVFEFMQSGALTDLIRQRKPTPIDFFRIAREIAMGMNYLHLCSIMHRDLKSGNVLLDAYGTVKISDFGLSCVLEIGHSSDLTAETGTYRWMAPEVIGHEPYSMKADVYSYGVILWEMLAKEQPFKGMSPIQAAFAVARQQMRPPFPKDTPESLLQLVETCWHQDPAQRPTFAQILDVLPAVRAQ 686          
The following BLAST results are available for this feature:
BLAST of NO22G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ30019.15.200e-6041.85serine/threonine protein kinase [Ectocarpus silicu... [more]
XP_009839645.11.500e-5942.61TKL protein kinase [Aphanomyces astaci] >ETV70982.... [more]
CCA14665.13.700e-5841.81serine/threonine protein kinase putative [Albugo l... [more]
CCI39983.14.800e-5844.21unnamed protein product [Albugo candida][more]
XP_008872549.18.300e-5842.07TKL protein kinase [Aphanomyces invadans] >ETV9912... [more]
OQR94815.19.100e-5741.72serine/threonine protein kinase [Thraustotheca cla... [more]
XP_024586790.11.600e-5642.21tkl protein kinase [Plasmopara halstedii] >CEG5042... [more]
XP_008617240.13.500e-5640.00TKL protein kinase [Saprolegnia diclina VS20] >EQC... [more]
GAX93204.14.500e-5642.25TKL protein kinase [Pythium insidiosum][more]
XP_012201659.15.900e-5640.75TKL protein kinase [Saprolegnia parasitica CBS 223... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004205NSK004205Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00660.1NO22G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595480gene_7064Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100466g5gene9012Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00660.1NO22G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00660 ID=NO22G00660|Name=NO22G00660|organism=Nannochloropsis oceanica|type=gene|length=3299bp
ATGAGGATGAATCGCGCTGCGGTCCACATCCATGAAATATCCCGGTCATC
GTCATCGTCCGATCTCACTGGCTCCCACTCCTCGTTGGACGAGGAGGAAG
GAGGGAAGAATGGAAGGAGGGAGAGAGGGAAGGGGTGTAGGCGGTGGATC
GTGACCGTGAGTAGTCAGGACCGGCCGGGGCTGCTCGATGCATTGACTCG
CGTGTTGAGTAAGTACGTCGCGAGGATCATGGACGCTGATGCCATGACGT
CGACCCCGACCTCGACAGCGTCCTCGTCCTCGGAGGGAGGGAGCGGGGAA
GGGGAAGGTTGTGTGATGGTGTTGGACCGATTTACGGTAGAGACGGAGGA
GGAGAGAGAGGGAGGGAGGGCGGGACGGAGAAATGGAGGGTTGAAGAAGG
AGGAGCTGGAGAGGGGGATTGAGGCGTCGGTTGGGGGGGGGGGGCGGGAG
GGAAGGAAAGAGCGGGAGGGGGAGGGAGGGAGGGAGGAGGAGGGGAGTTT
GTTGGCGCCATCAGGTGTGTGGAACACTCCGGAGAGGGTGACAGTGGGAG
AAAGGGAGGAAGGGAGGAGGAGGGGGAAGAGCGTTGAGAAGCTGATGGTG
GGAGAAGGACAGGAAAGGAGGGAAAAAGGGAAAAAGGGAGGGGAAGACAG
CGCGCAGGTACCTCCACCGTGGACGTCCGAGCGGTCCTCGTCCTCGTTCT
CATCTTCTTCTCCCTCCTCTGCCATCGGTGATGAAGTTGAAGAAGAAGGA
AAGGGGGTCAAGGAGGACGGAGCAATAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCATCCCCACCACCACCAACAGCCGCAGTGACAGGAGAAGGAGAAG
GAGGGAGGTCCTTCGCTTTTTACGCCCCTCGTCCTCGTCCTTGCCCTCGT
TCGCGCAGTAGCAATGTCAACAGCAGCGTCAGTAGCACCACTATCATCAG
TACTGACGCCATGAGCAGGAGCAGCAGCGACAACAGTGTGATCAGCGGTG
CCACGACCGTCGCCAGTGGTGAAGAGGAAAGGGAGGACGAGGAGGAGGGC
GGGCGGGAAGGACAGAAGGATGACATGCCCCCTCTCCCTCCTCAGTCTCA
GTTCGTTGGGCAAGGGATAGGATCGGGCACGGACAGCAGTGTCATGAACA
TAAATCCCACCACCTCGTCCTGCACCTCCCTCTCCTCCTCTTCGTCCTCC
TCCTCTTCTTCTTCCTCCTCCTCCTCCTTCTCCTCCTCCTCATTAGTGGC
GCCGCTGTCACTGACGGCGCACCGTGGGGGAGGGCGGGAGGGAGGGCTTA
TCCCCTTTGAGGACATCACGCTGATAGAAATGGTAAGAAGAGGCCACTCC
GGAACTCTGTGGAGAGGGCGATGGGAAGGGAAGAAGGTGGCGGTCAAACT
CATCCACACCACCCCTCCCTTCCGCCCTCCCTGTGACAAGGAGGAAGGTG
GGGGGGAGGGAGGGACGGAGGAAGAGAAAAAGCAGGCACGGCTGCTACGA
GAGTTTCAGCGAGAAAGGGTAATTGTGAGAGGCCTCAACCATCCCAACCT
CTGTCGTCTCCACGGCGTATCAAGGAAGGATGGGAGGGAGGGAGGGAGGG
AAGGGGGGGGGGAGGTCTTGGCACTCGTGTACGAATACATGGAGGGGGGA
TCGCTGGCGGCATTGCTGAGGGATAAGGACAGGACCTACGACATGATGCA
GGTGGCTCAGGATGTGGCAGAGGGAATGGAGTACCTCCACAGGAGGGGGG
TGATGCATAGGGACTTAAAGgtaaggagggagggagggagggagggaggg
agggaggggtgttttcggttttcatcagtccacccctcttcccattttcg
ttttgctctctctctccccccctcccccttccctcaactcacttccccgt
tccgttccaactcatgccattgaaatcctcccctcctccgcccctttctc
cctccctccctccctccctcccttcctgtcggacacagCCGGACAACCTC
CTCCTGGACATGCACGGCCGCTGTGTCATTGGAGATTTCGGGCTTGTGTG
TCCCACCATCTCCGAAAACGACCACACGGgtacgtcccccctcctcccct
tccccctttccctcccttccttctccccccctcaaaagccatgttccctc
cctccttcgtttcctgcctcaccctatattttgcagacgctcatttgtcc
atccattcgagtccttctcgttccttccctcccttcctcgtatccggaaa
aagtcttgcctcccgcttccacccccacgttttcccaatcacactttctg
ttccttcctttcgtcatcttccctcctcatcagGCGAGACGGGCACCTAC
CGCTACATGGCCAGTGAGGTGATTCGACACGAGgtgagagggagcagcat
gaatatgtccatctatcaatcaatcaatcaatctatccaatcaattgata
aatttatccaaagagggaggaataaaaacaaggcaacccgggaagcaagg
acatattttcatggctttgcctgctcttcactaaaactcatgactcataa
ctcataacgtttaaccctctctcccgccctcccttcctccttccagCCCT
ACTCCACCGCTGCCGATGTATATTCGTACGGCATCGTCCTCTGGGAGCTT
CTGACGCGGGAACAACCCTTCAGAGGCATGACCCCCATCCAAGCCGCGTT
CGCCGTGGCGCGGCAAGGCTTCCGTCCTTCCCTCCCGCCTTCCACCCCTT
CCATGCTCGCGTCACTCATTCAGGCTTGCTGGCATGAGAACGCTGTTTGT
CGTCCAACCTTCACCCAGGTCGTGTGCGCTATCAAACACATACGACTGGA
GGAAGGTGAGAGGAGCAATGAGGGCAAGGAGGGAATGAGgtaggtaggga
gagggggtgaggtagtcgcgcctcgctgttgaatttgaatgtgttgagga
tcctgtcggacgtcgtcttttgcttacggagatgccgtgtgggtccgggt
tggtcaggttgtagaagaggtgaatggagggcgtgctagatagaagggga
ggggatcgaatcatttgtggttggaggactttatttagtctgagggacag
caaaagttaagagtgtagcagtggcagGAGCAATAGCAGTAGTGGCATCA
GCAGCGGCAACAGCAGCAGCAGCACCAGCAACACCTATGGCAATATAACC
GTAGGGGATATACTACGAATGTGTCTAAAAAAGAGTATTATAAATCTCTA
CTGCAGCACTTCCTACAGCAGCAGCAGCAGCAGCAGCAGCAACGAGTAA
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protein sequence of NO22G00660.1

>NO22G00660.1-protein ID=NO22G00660.1-protein|Name=NO22G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=792bp
MRMNRAAVHIHEISRSSSSSDLTGSHSSLDEEEGGKNGRRERGKGCRRWI
VTVSSQDRPGLLDALTRVLSKYVARIMDADAMTSTPTSTASSSSEGGSGE
GEGCVMVLDRFTVETEEEREGGRAGRRNGGLKKEELERGIEASVGGGGRE
GRKEREGEGGREEEGSLLAPSGVWNTPERVTVGEREEGRRRGKSVEKLMV
GEGQERREKGKKGGEDSAQVPPPWTSERSSSSFSSSSPSSAIGDEVEEEG
KGVKEDGAIAAAAAAAAAASPPPPTAAVTGEGEGGRSFAFYAPRPRPCPR
SRSSNVNSSVSSTTIISTDAMSRSSSDNSVISGATTVASGEEEREDEEEG
GREGQKDDMPPLPPQSQFVGQGIGSGTDSSVMNINPTTSSCTSLSSSSSS
SSSSSSSSSFSSSSLVAPLSLTAHRGGGREGGLIPFEDITLIEMVRRGHS
GTLWRGRWEGKKVAVKLIHTTPPFRPPCDKEEGGGEGGTEEEKKQARLLR
EFQRERVIVRGLNHPNLCRLHGVSRKDGREGGREGGGEVLALVYEYMEGG
SLAALLRDKDRTYDMMQVAQDVAEGMEYLHRRGVMHRDLKPDNLLLDMHG
RCVIGDFGLVCPTISENDHTGETGTYRYMASEVIRHEPYSTAADVYSYGI
VLWELLTREQPFRGMTPIQAAFAVARQGFRPSLPPSTPSMLASLIQACWH
ENAVCRPTFTQVVCAIKHIRLEEGERSNEGKEGMRSNSSSGISSGNSSSS
TSNTYGNITVGDILRMCLKKSIINLYCSTSYSSSSSSSSNE*
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