NO22G00620, NO22G00620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_001315860.1 (hypothetical protein [Trichomonas vaginalis G3] >EAY03637.1 conserved hypothetical protein [Trichomonas vaginalis G3]) HSP 1 Score: 95.9 bits (237), Expect = 1.000e-15 Identity = 77/290 (26.55%), Postives = 102/290 (35.17%), Query Frame = 0 Query: 600 QAW--EADRLGLGELECSYGK-GYVTQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCNGEEELPMVQCVGCKDWFH-QTGGCIHDGYDFSMDEFDQED---YVCETCLNTPDLAFLQDYPSH 883 +AW + D + E +C+Y K GY QLVYVC C+ K + G+C CA+ CH GH VR IG + FRCDCGNDR +H P ++++ K NP N Y HNFFDRWC C+G + MVQC+ C DWFH G +D+ D D +VC+ CL T + FL+ +P H Sbjct: 311 EAWLTQVDTIKAEEGDCTYEKYGYCDQLVYVCRDCI----------------------------------------KSDKPFGICEQCAKICH--QGHDVRPIGVRRRFRCDCGNDR-SHR------------PCSAMMK---------------------------------------------------------------AKTCENPHNSYGHNFFDRWCTCDGPDTGGMVQCIVCSDWFHVPCIGLFPRDCPIKLDDVDCLDDWTFVCKKCLET-RVTFLEKFPDH 481
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_012898326.1 (uncharacterized protein [Blastocystis hominis] >CBK24278.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 85.9 bits (211), Expect = 1.100e-12 Identity = 59/210 (28.10%), Postives = 74/210 (35.24%), Query Frame = 0 Query: 669 EEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLG------GRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCNGEEELPMVQCVGCKDWFH-----QTGGCIHDGYDFSMDEFDQEDYVCETC 868 E K +V +C CA CH GH V +G K +CDCGN F LG +C LCP GK WNP N Y+HN +RWCYC+ EE LPMVQCV C DWFH + H+G +++ + D+VC C Sbjct: 10 EALSKFYNVGYLCEECAHFCHTNRGHDVVALGVKDNVKCDCGNRIFLQLDELGVSEEGHSFHSCYLCP---------------------------------------------------------------------GKPEWNPCNVYSHNCRERWCYCDEEERLPMVQCVKCCDWFHNDCAEKVWSETHEGQTIDLND-ESIDFVCRDC 149
BLAST of NO22G00620 vs. NCBI_GenBank
Match: KYQ90741.1 (ubiquitin protein ligase E3 component n-recognin 7 [Tieghemostelium lacteum]) HSP 1 Score: 80.9 bits (198), Expect = 3.400e-11 Identity = 66/272 (24.26%), Postives = 95/272 (34.93%), Query Frame = 0 Query: 611 ELECSYGKGYVTQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCNGEEEL--PMVQCVGCKDWFHQTGGCIHDGYDFSMDEFDQEDYVCETCLNTPDLAFLQDYP 881 E C++ KGYVTQ VY C TC +N ++ T +T EG V G C C+ QCH L H V + +K +FRCDCG + GG+ C + D + N N YNHNF R+CYC+ + M+QC+ C DW+H+ ++ Y ++ D + +D+VC C+ Q YP Sbjct: 60 EEHCTFEKGYVTQPVYSCGTCNKN------------------NQKSGTSNTGLEG-----------VFGFCYGCSMQCH--LYHDVYELFKKRSFRCDCG------TLKSGGK--CCI-------------------------------------------------------------------QNDKQGSENNTENHYNHNFLGRYCYCDSLYDYVEDMIQCIFCLDWYHEKCVQLNSNYPYAPDPNEFDDFVCRDCVTKHHSILFQYYP 225
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_018583138.1 (PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Scleropages formosus]) HSP 1 Score: 79.3 bits (194), Expect = 1.000e-10 Identity = 70/278 (25.18%), Postives = 98/278 (35.25%), Query Frame = 0 Query: 613 ECSYGKGYV-TQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYC-----NGEEELP--MVQCVGCKDWFHQTGGCIHDGYDFSMDEFDQEDYVCETCLNTPDLAFLQDYPSH 883 +CSY +GYV Q VY C TC TP+ G + G+C++C+ +CH GH + + K FRCDCGND+F G L C L P K NP N+YNHNFF +C C + E+++P M+QC+ C+DWFH H G + + + ++ VCE C+N FL Y +H Sbjct: 38 KCSYPQGYVKRQAVYACSTC-----------------------------TPRGG----------EPAGVCLACSYKCHE--GHELFELYTKRNFRCDCGNDKF-------GGLKCKLFP---------------------------------------------------------------------DKVGCNPNNKYNHNFFGLYCTCDRPYPDSEDQVPDEMIQCIVCEDWFHGR----HLGCELE-ECVELQEMVCEACMN--KAPFLWSYAAH 191
BLAST of NO22G00620 vs. NCBI_GenBank
Match: OHT15839.1 (hypothetical protein TRFO_42250 [Tritrichomonas foetus]) HSP 1 Score: 77.4 bits (189), Expect = 3.800e-10 Identity = 70/273 (25.64%), Postives = 90/273 (32.97%), Query Frame = 0 Query: 613 ECSYGK-GYVTQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCNGEEELPMVQCVGCKDWF-HQTGGCIHDGYDFSMDE---FDQEDYVCETCLNTPDLAFLQDYP 881 EC+Y + GY Q V+ C TC N EE G+C CA CH GH + IG + FRCDCGN+R CPA P +F K S N N YNHNF +RWC C+G + PMVQCV C +WF H+ G D ++E + ++C C++ L FL D P Sbjct: 331 ECTYERYGYCEQQVFSCYTCSRN---------------------------------------EERPIGVCEQCALICHD--GHDIIPIGSRRRFRCDCGNNR---------------CPA-----PCRTMFDP--------------------------------------------------------KVSENTRNVYNHNFRNRWCICDGPDRPPMVQCVCCDEWFHHECIGFYTDKRCLILEENPCMSEYLFICNDCIDN-KLTFLADMP 485
BLAST of NO22G00620 vs. NCBI_GenBank
Match: KXS13997.1 (hypothetical protein M427DRAFT_136085 [Gonapodya prolifera JEL478]) HSP 1 Score: 76.6 bits (187), Expect = 6.500e-10 Identity = 67/278 (24.10%), Postives = 87/278 (31.29%), Query Frame = 0 Query: 613 ECSYGKGYVTQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCNG---EEELPMVQCVGCKDWFHQTGGCIHDGYDFSMDEFDQEDYVCETCL-NTPDLAFLQDYPSHSLLD 887 +CSY KG Q VY C TC +D G+C +C+ CHG H + I K AFRCDCG +F+ CT P + L N N Y HNF D+WC+C+G EE M+QC C+DW+H CI Y F +DY+C TC+ P L + P +LD Sbjct: 71 QCSYDKGETPQNVYACLTC----------------------------------------SPSDDPAGICYACSIACHG--DHYLVEIFAKRAFRCDCGGCKFS--------TPCTRPPHVTRLP--------------------------------------------------------------------NDKNVYGHNFQDKWCFCDGSYDEEADTMIQCCVCEDWYHDR--CIGSAYSF-------DDYICRTCVARLPFLTKYTNLPEFKVLD 221
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_017538317.1 (PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X1 [Pygocentrus nattereri]) HSP 1 Score: 75.5 bits (184), Expect = 1.400e-9 Identity = 67/279 (24.01%), Postives = 99/279 (35.48%), Query Frame = 0 Query: 613 ECSYGKGYV-TQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYC-----NGEEELP--MVQCVGCKDWFH-QTGGCIHDGYDFSMDEFDQEDYVCETCLNTPDLAFLQDYPSH 883 +CSY +GYV Q +Y C TC TP+ G + G+C++C+ +CH GH + + K FRCDCGND+F G + C L P K N N+Y+HNFF +C C + E+ELP M+QC+ C+DWFH + GC+ + + ++ +CE+C+N FL Y +H Sbjct: 39 KCSYPEGYVKRQALYACNTC-----------------------------TPKGG----------EPAGICLACSYKCHE--GHELFELYTKRNFRCDCGNDKF-------GEMECKLFPE---------------------------------------------------------------------KEKANSGNKYSHNFFGLYCTCDRPYPDPEDELPDEMIQCIICEDWFHGRHLGCV------VPESVELQEMICESCMNKS--PFLWTYAAH 192
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_017538318.1 (PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X2 [Pygocentrus nattereri]) HSP 1 Score: 75.5 bits (184), Expect = 1.400e-9 Identity = 67/279 (24.01%), Postives = 99/279 (35.48%), Query Frame = 0 Query: 613 ECSYGKGYV-TQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYC-----NGEEELP--MVQCVGCKDWFH-QTGGCIHDGYDFSMDEFDQEDYVCETCLNTPDLAFLQDYPSH 883 +CSY +GYV Q +Y C TC TP+ G + G+C++C+ +CH GH + + K FRCDCGND+F G + C L P K N N+Y+HNFF +C C + E+ELP M+QC+ C+DWFH + GC+ + + ++ +CE+C+N FL Y +H Sbjct: 39 KCSYPEGYVKRQALYACNTC-----------------------------TPKGG----------EPAGICLACSYKCHE--GHELFELYTKRNFRCDCGNDKF-------GEMECKLFPE---------------------------------------------------------------------KEKANSGNKYSHNFFGLYCTCDRPYPDPEDELPDEMIQCIICEDWFHGRHLGCV------VPESVELQEMICESCMNKS--PFLWTYAAH 192
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_008306149.1 (PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X1 [Cynoglossus semilaevis] >XP_008306156.1 PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X1 [Cynoglossus semilaevis] >XP_008306165.1 PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X1 [Cynoglossus semilaevis] >XP_008306174.1 PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X1 [Cynoglossus semilaevis]) HSP 1 Score: 73.2 bits (178), Expect = 7.200e-9 Identity = 68/278 (24.46%), Postives = 89/278 (32.01%), Query Frame = 0 Query: 614 CSYGKGYV-TQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCN-------GEEELPMVQCVGCKDWFHQTG-GCIHDGYDFSMDEFDQEDYVCETCLNTPDLAFLQDYPSH 883 CSY +GYV Q V+ C TC TP + G+C++CA +CH GH + + K FRCDCGND+F G C L P K N N YNHNF +C CN +++ M+QCV C+DWFH GC + D D ++ VCE C+N FL Y +H Sbjct: 36 CSYSRGYVKRQAVFACNTC-----------------------------TPSAA----------EPAGICLACANKCHD--GHDIFELYTKRNFRCDCGNDKF-------GDFKCQLSP---------------------------------------------------------------------DKDKENAQNHYNHNFSGLYCTCNQKYPDAENQDQDEMIQCVICEDWFHSRHLGCPVE------DPEDLQEMVCEACMNR--APFLWTYAAH 188
BLAST of NO22G00620 vs. NCBI_GenBank
Match: XP_016893262.1 (PREDICTED: putative E3 ubiquitin-protein ligase UBR7 isoform X2 [Cynoglossus semilaevis]) HSP 1 Score: 73.2 bits (178), Expect = 7.200e-9 Identity = 68/278 (24.46%), Postives = 89/278 (32.01%), Query Frame = 0 Query: 614 CSYGKGYV-TQLVYVCETCVENTXXXXXXXXXXXXXXXXTSRLPFTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFRCDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGKASWNPLNRYNHNFFDRWCYCN-------GEEELPMVQCVGCKDWFHQTG-GCIHDGYDFSMDEFDQEDYVCETCLNTPDLAFLQDYPSH 883 CSY +GYV Q V+ C TC TP + G+C++CA +CH GH + + K FRCDCGND+F G C L P K N N YNHNF +C CN +++ M+QCV C+DWFH GC + D D ++ VCE C+N FL Y +H Sbjct: 36 CSYSRGYVKRQAVFACNTC-----------------------------TPSAA----------EPAGICLACANKCHD--GHDIFELYTKRNFRCDCGNDKF-------GDFKCQLSP---------------------------------------------------------------------DKDKENAQNHYNHNFSGLYCTCNQKYPDAENQDQDEMIQCVICEDWFHSRHLGCPVE------DPEDLQEMVCEACMNR--APFLWTYAAH 188 The following BLAST results are available for this feature:
BLAST of NO22G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00620 ID=NO22G00620|Name=NO22G00620|organism=Nannochloropsis oceanica|type=gene|length=4873bpback to top protein sequence of NO22G00620.1 >NO22G00620.1-protein ID=NO22G00620.1-protein|Name=NO22G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1365bpback to top Synonyms
Publications
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