NO22G00570, NO22G00570 (gene) Nannochloropsis oceanica

Overview
NameNO22G00570
Unique NameNO22G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1513
Alignment locationchr22:195689..197201 -

Link to JBrowse

Properties
Property NameValue
Description20S proteasome alpha subunit E2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:195689..197201 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
GO:0019538protein metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_suA-type
IPR001353Proteasome_sua/b
IPR000426Proteasome_asu_N
Homology
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: EWM21400.1 (proteasome subunit alpha type 5 [Nannochloropsis gaditana])

HSP 1 Score: 433.3 bits (1113), Expect = 4.800e-118
Identity = 220/229 (96.07%), Postives = 226/229 (98.69%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGEEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKEGFKSYGK 230
            MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVD+HIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDG+EKKMSRPFGVALLLAGYDDKGPQLFFSDPSGT+ QFKAKAIGSGSEGAQTNLQESYSDSFTLEEAE+LALSTLKQVMEEKISA+YVEV SVTKEGFKS G+
Sbjct:  350 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVTKEGFKSEGE 578
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: CBJ27423.1 (proteasome subunit alpha [Ectocarpus siliculosus])

HSP 1 Score: 367.1 bits (941), Expect = 4.200e-98
Identity = 185/239 (77.41%), Postives = 210/239 (87.87%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGEEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKEGFKSYGKDALDAILARI 240
            MF TRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK GV+LAVEKR++SPLLEP+SVEKIMEVDSHIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+RVEALTQ +CDLAL+F E G  K MSRPFGVALL+AG+DD+G QLFFSDPSG F ++K KAIGSGSEGAQ+ LQE YSDS TL EAE LA+STLKQVMEEKI+ D VEVASVT++G+  Y  + L  +L R+
Sbjct:    1 MFATRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLLEPSSVEKIMEVDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGFDDRGAQLFFSDPSGMFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINPDNVEVASVTEKGYSVYTPEQLTEVLQRL 239
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: EJK69435.1 (hypothetical protein THAOC_09311 [Thalassiosira oceanica])

HSP 1 Score: 349.4 bits (895), Expect = 9.100e-93
Identity = 181/244 (74.18%), Postives = 214/244 (87.70%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGE-EKKMSRPFGVALLLAGYDD-KGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTK-EGFKSYGKDALDAILARI 240
            M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTA+G+ TKHG +LAVEKR++SPLLEP+SVEKI E+DSH+GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EPI VEALTQG+CDLAL+F E  DG+ +K+MSRPFGVALL+AG+DD  G QLFFSDPSGTF Q+KAKAIG+GSEGAQ+ L ESY++  TLEEAE LALSTLKQVMEEKIS + VE+A VT+ +G+     + + A+L R+
Sbjct:    1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTKHGSVLAVEKRLTSPLLEPSSVEKIAEIDSHVGAAMSGLVADARTLVDHARVEAQNHRFTYDEPIGVEALTQGVCDLALSFGEGADGDKDKRMSRPFGVALLIAGWDDLNGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSTLSESYNEDMTLEEAEELALSTLKQVMEEKISTENVELARVTEGKGYHGATAEEVGAVLERL 244
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: OEU17546.1 (proteasome subunit alpha [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 347.4 bits (890), Expect = 3.500e-92
Identity = 180/243 (74.07%), Postives = 209/243 (86.01%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGEE-KKMSRPFGVALLLAGYDD-KGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKEGFKSYGKDALDAILARI 240
            M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G +LAVEKR++SPLL+P SVEKI E+DSHIGAAMSGL+ DA+TLVDHARVEAQNH F+Y+EPI VE LTQ +CDLAL+F E  DG+  K+MSRPFGVALLLAG+DD +G QL+FSDPSGTF ++KAKAIG+GSEGAQ+NL+ESYSDS TL+EAE LALSTLKQVMEEKIS + +EVA  T  GFK    D +  +L R+
Sbjct:    1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGCVLAVEKRLTSPLLDPESVEKIAEIDSHIGAAMSGLVADAKTLVDHARVEAQNHSFTYDEPIGVEPLTQAVCDLALSFGEGSDGDSAKRMSRPFGVALLLAGWDDLEGSQLYFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSDSMTLKEAEELALSTLKQVMEEKISTENIEVARATPAGFKIVSHDDVAIVLERL 243
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: GAX12657.1 (20S proteasome subunit alpha 5 [Fistulifera solaris])

HSP 1 Score: 345.9 bits (886), Expect = 1.000e-91
Identity = 184/244 (75.41%), Postives = 211/244 (86.48%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGEEKK-MSRPFGVALLLAGYDD-KGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKE-GFKSYGKDALDAILARI 240
            M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR++SPLL+P SVEKI E+DSH+GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+ VEALTQ +CDLAL+F E  DG+ KK MSRPFGVALLLAGYDD  G QLFFSDPSGTF ++KAKAIG+GSEGAQ+NL+ESYSD+ TL+EAE LALSTLKQVMEEKIS D +E+A VT E GF     + + A L ++
Sbjct:    1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKEGCILAVEKRLTSPLLDPASVEKIAEIDSHMGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDDLDGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSDTMTLDEAEVLALSTLKQVMEEKISTDNIELARVTPEKGFHIATPEEVTAALEKL 244
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: GAX27769.1 (20S proteasome subunit alpha 5 [Fistulifera solaris])

HSP 1 Score: 344.4 bits (882), Expect = 2.900e-91
Identity = 183/244 (75.00%), Postives = 211/244 (86.48%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGEEKK-MSRPFGVALLLAGYDD-KGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKE-GFKSYGKDALDAILARI 240
            M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR++SPLL+P SVEKI E+DSH+GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+ VEALTQ +CDLAL+F E  DG+ KK MSRPFGVALLLAGYDD  G QLFFSDPSGTF ++KAKAIG+GSEGAQ+NL+ESYS++ TL+EAE LALSTLKQVMEEKIS D +E+A VT E GF     + + A L ++
Sbjct:    1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKEGCILAVEKRLTSPLLDPASVEKIAEIDSHMGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDDLDGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSETMTLDEAEVLALSTLKQVMEEKISTDNIELARVTPEKGFHIATPEEVTAALEKL 244
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: XP_002293808.1 (proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335] >EED88817.1 proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 343.2 bits (879), Expect = 6.500e-91
Identity = 182/244 (74.59%), Postives = 212/244 (86.89%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGE-EKKMSRPFGVALLLAGYDD-KGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKE-GFKSYGKDALDAILARI 240
            M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR++SPLLEP+SVEKI E+D HIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+E I VEALTQG+CDLAL+F E  DG+ +K+MSRPFGVALL+AG+DD KG QLFFSDPSGTF Q+KAKAIG+GSEGAQ++L ESY++  TLEEAE LALS LKQVMEEKIS + VE+A VT+E G+ S   + +  +L R+
Sbjct:    1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKSGSILAVEKRLTSPLLEPSSVEKIAEIDVHIGAAMSGLVADARTLVDHARVEAQNHRFTYDEAIGVEALTQGVCDLALSFGEGSDGDKDKRMSRPFGVALLIAGHDDLKGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSSLMESYNEDMTLEEAEELALSVLKQVMEEKISTENVELARVTEERGYHSATVEEVGVVLERL 244
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: XP_002185881.1 (proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1] >ACI65351.1 proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 342.0 bits (876), Expect = 1.500e-90
Identity = 184/244 (75.41%), Postives = 209/244 (85.66%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGEEKK-MSRPFGVALLLAGYDD-KGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKE-GFKSYGKDALDAILARI 240
            M+LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ TK G ILAVEKR+SSPLL+P+SVEKI EVDSHIGAAMSGL+ DARTLVDHARVEAQNH F+Y+EPI VEALTQ +CDLAL+F E  DG+ KK MSRPFGVALLLAGYD+  G QLFFSDPSGTF ++KAKAIG+GSEGAQ+NL+ESYS++ TL EAE LALSTLKQVMEEKIS + +E+A VT E GF     + +   L R+
Sbjct:    1 MYLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKDGCILAVEKRLSSPLLDPSSVEKIAEVDSHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDELDGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSETMTLNEAEELALSTLKQVMEEKISIENIELARVTPEKGFHIATPEEVAVALERL 244
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: XP_009037141.1 (hypothetical protein AURANDRAFT_60080 [Aureococcus anophagefferens] >EGB08426.1 hypothetical protein AURANDRAFT_60080 [Aureococcus anophagefferens])

HSP 1 Score: 340.5 bits (872), Expect = 4.200e-90
Identity = 169/245 (68.98%), Postives = 210/245 (85.71%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGEEK-----KMSRPFGVALLLAGYDDKGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTKE-GFKSYGKDALDAILARI 240
            MF+ +SEYDRGVNTFSPEGRLFQVEYAI+A+KLGST++G+ T  GV+LAVEKR++S L+E +S+EK+ME+DSH GAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+   ALTQ +CDLAL+F ED EE+     KMSRPFGVALL+AGYDD G QL+++DPSGTFTQ+KAKA+GSG EGAQ+NLQESYS+S +  +AE LALSTLKQVME+K++ D V+VASVTK+ GF  Y +  + A++ARI
Sbjct:    1 MFMAKSEYDRGVNTFSPEGRLFQVEYAIQAVKLGSTSIGIKTADGVVLAVEKRVTSTLMESSSIEKVMEIDSHCGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMPTTALTQSVCDLALSFGEDSEEREGGGSKMSRPFGVALLVAGYDDDGAQLYYADPSGTFTQYKAKAMGSGGEGAQSNLQESYSESMSFADAEVLALSTLKQVMEDKLTTDNVDVASVTKDGGFHVYTEAEITAVVARI 245
[Close]
BLAST of NO22G00570 vs. NCBI_GenBank
Match: ORY07443.1 (N-terminal nucleophile aminohydrolase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 335.5 bits (859), Expect = 1.400e-88
Identity = 166/242 (68.60%), Postives = 203/242 (83.88%), Query Frame = 0 
Query:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAE--DGEEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALSTLKQVMEEKISADYVEVASVTK-EGFKSYGKDALDAILARI 240
            MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVG+ T  GV+LA EKRI+SPLLEP+S+EKI+E+D+H+G AMSGL  D+RT++DHARVEAQNH F+YNE I+VE++TQ +CDLAL F E  +GEE  MSRPFGVALL+ GYD+ GPQL+ +DPSGTF ++ AKAIGSGSEGAQT LQ+ Y+ S TL+EAE LAL  LKQVMEEK+++  VE+AS+   E F+ Y K  L+ ++AR+
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAAEKRINSPLLEPSSIEKILEIDAHLGCAMSGLTADSRTMIDHARVEAQNHHFTYNESIKVESVTQAVCDLALRFGEGAEGEESIMSRPFGVALLIGGYDENGPQLYHADPSGTFVRYDAKAIGSGSEGAQTELQQQYNKSMTLQEAETLALKVLKQVMEEKLNSINVELASIVPGEKFRLYNKAELEEVIARL 242
The following BLAST results are available for this feature:
BLAST of NO22G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21400.14.800e-11896.07proteasome subunit alpha type 5 [Nannochloropsis g... [more]
CBJ27423.14.200e-9877.41proteasome subunit alpha [Ectocarpus siliculosus][more]
EJK69435.19.100e-9374.18hypothetical protein THAOC_09311 [Thalassiosira oc... [more]
OEU17546.13.500e-9274.07proteasome subunit alpha [Fragilariopsis cylindrus... [more]
GAX12657.11.000e-9175.4120S proteasome subunit alpha 5 [Fistulifera solari... [more]
GAX27769.12.900e-9175.0020S proteasome subunit alpha 5 [Fistulifera solari... [more]
XP_002293808.16.500e-9174.59proteasome subunit alpha type 5 [Thalassiosira pse... [more]
XP_002185881.11.500e-9075.41proteasome subunit alpha [Phaeodactylum tricornutu... [more]
XP_009037141.14.200e-9068.98hypothetical protein AURANDRAFT_60080 [Aureococcus... [more]
ORY07443.11.400e-8868.60N-terminal nucleophile aminohydrolase [Basidiobolu... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004215NSK004215Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00570.1NO22G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595444gene_7057Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100300g2gene9020Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00570.1NO22G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00570 ID=NO22G00570|Name=NO22G00570|organism=Nannochloropsis oceanica|type=gene|length=1513bp
GCTCCATACAGTACCGTGCTGTCCAGCGTCAGGCAATTTGTCTTCACAAC
GCCTTGGATCACGAATTGATCTTATCTTGTACCCCGGTGTAATAAATAAG
ACAGGCGCATGGGCCAGCTCGGGTTCGCATGGAACTCCGTGCTCGCCGAG
AACGCCAGAGAATTCCTTCTTCCATGCCATCCCCTCATACCCGTTTCCCC
TCCGCGCCCAGTGCTACAAAGCTGTAGTTTCCGTGGTCGTTGTCGTCGAT
AGACTGGTGCTAGCGTTGTTGCGTTCCTGCTTCTCCACTTACCCCCTACC
CTTGCCTCTCCTCCCTTCCTCCTTCAAATAGTCACAGGCTCAAAGAACTT
CTCCTCGCCCTGTCAACCAGCCCTCGCCTCCCCTCTCATCTACCACCAAT
CATTCAGCCATGTTCCTAACCCGCAGCGAATACGACCGAGGGGTCAACAC
CTTCTCTCCCGAAGGCCGGTTGTTCCAAGTTGAGTACGCTATTGAGGCCA
TCAAGCTAGGGTCTACAGCCGTGGGGGTCTGCACCAAACATGGCGTCATC
CTCGCTGTGGAAAAGCGCATTTCCTCGCCCCTGCTGGAACCGACGAGCGT
GGAGAAGATTATGGAGGTTGATTCCCATATTGGTGCTGCCATGTCGGGCT
TGATGCCTGATGCCAGAACGTTGGTGGACCATGCTCGGGTGGAGGCGCAG
AATCATCGATTTAGgtactgtgaagggagaaaagggtggggaggagagaa
aacgtgcgcaaggacttgatgcgggaaagtctcgttgacgatgacgatgt
tgaaatatgccactggttgaggtggttggttttcggtcgctcgcgctccc
ctttgacccgatccctccctcccttccttcctccctcctcccgcctctcc
cgatagTTACAACGAGCCTATCCGGGTGGAGGCCCTGACACAAGGCATAT
GTGACCTGGCCCTCAACTTCGCCGAAGATGGAGAAGAGAAGAAGATGAGC
CGTCCCTTCGGTGTGGCGCTCTTGCTGGCTGGGTATGATGACAAGGGGCC
CCAACTGTTTTTTTCGGACCCCTCCGGAACGTTTACTCAGTTCAAGGCCA
AGgtatgcctttctcgccatccccccttccttccctccttccctcatccc
tttttcctgcctttgatacgtgtgaaatttcatcctccctctaccccttt
ctcaccttcgtagGCGATTGGTTCGGGTTCGGAAGGCGCGCAAACGAATC
TGCAAGAGAGCTACAGTGACTCCTTCACGCTAGAGGAGGCGGAAAATCTG
GCCTTGTCGACATTGAAGCAAGTGATGGAGGAGAAGATTAGCGCCGACTA
CGTGGAGGTGGCGAGTGTAACGAAGGAGGGATTCAAGAGCTACGGGAAGG
ACGCACTGGACGCCATTCTGGCTAGGATCTAGGAGGGATGGAGGGAAGGT
CGGGAGGAGGCGGTGGTGGAGAGGTAGTGGGAAGAATCATGAAGCGGGTT
AAAGAAGAAAAAG
back to top

protein sequence of NO22G00570.1

>NO22G00570.1-protein ID=NO22G00570.1-protein|Name=NO22G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAV
EKRISSPLLEPTSVEKIMEVDSHIGAAMSGLMPDARTLVDHARVEAQNHR
FSYNEPIRVEALTQGICDLALNFAEDGEEKKMSRPFGVALLLAGYDDKGP
QLFFSDPSGTFTQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAENLALST
LKQVMEEKISADYVEVASVTKEGFKSYGKDALDAILARI*
back to top
Synonyms
Publications