NO22G00550, NO22G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00550 vs. NCBI_GenBank
Match: EWM21396.1 (Tetratricopeptide-like helical [Nannochloropsis gaditana]) HSP 1 Score: 673.3 bits (1736), Expect = 1.500e-189 Identity = 631/957 (65.94%), Postives = 685/957 (71.58%), Query Frame = 0 Query: 377 WVEAAHVNGSALRDEDYRVLKDLARRREPLLARAFCQDLLRAAEERQEPLSVQSYLTLMKNMGRAGDWEGAMGVFEALRGQHEGVGGKEFMKVIRVLARLGQYEEAMVYWETAEKLGFGPPSILDFNKLFDILGRAKQWPRCRGLYEKMLALGVKPNKSTYQVLAHSAAVAAPWSDVLKVLDEATRDSCATNYVFTMALKGLKVRRNWKAAQALIGHMRGRWGIKPDTVTYTAAISACERSSNCSAALSLLDLMKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDKIMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARGVARDTCTYNSLMDGYTRAGSFPAVLSTLDQMRKEGGRASPDVISYTQALTAAEKVGDYEGADRLLAAMKTAGVKWNQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGV-------RKGRRGE--EG----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNFSYAGTREALLLDMREYHVLLRAICRKGHLAFAHEILKHMARVDLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAVAGCPERALSIVDPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVPVDFSLFRDENLLDLHGLSAPVASAAVRYALGEVREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKE 1309 W+EAAH+NG+AL +DY +LKDL RRRE + ARAFC LL E PLSV SYLTLMKN+GRAGDWEGA+G+FEALR +H+GVGGKEFMK+IRVLAR G+YE AM YW+ AE LG GPPSILDFNK GV+PNKSTYQVLAHSAAV+APWS+VL++LD AT SCA+NYVFTMALKGLKVRRNWKAA ALI MR RW I PDTVTYTAAISACERSSNC+ ALSL+ LM+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT+D++ P KA+ V RDTCTYN+LMDGYTRAGSFP VL LDQM KEGGRA PDVISYTQAL+AAEKVGDYE ADRLLAAMK AG++WNQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +G+ GE +G G G+ + + LD REYHVLLRAICRKGHLAFAHEIL+HM RV LPP AC +AGCPE+ALS+VDPAFSWDFYSAAITIYHQ GC+ EAD+LY+ AV+HGKVPVD +L ++ LDLHG+SAPVA+AAVRYAL +REEW RCGP+AVKDLVLISG+GKGSLV F PTLRP VQDMLVEQYYPPIDS TQPGNAGRVVV R SLL+WLEGKE Sbjct: 191 WIEAAHINGTALPPQDYLLLKDLVRRREAMQARAFCFSLL----EGSRPLSVHSYLTLMKNLGRAGDWEGAVGIFEALRRRHQGVGGKEFMKLIRVLARAGKYEAAMAYWDKAEALGLGPPSILDFNKXXXXXXXXXXXXXXXXXXXXXXXXGVRPNKSTYQVLAHSAAVSAPWSEVLRILDAATLASCASNYVFTMALKGLKVRRNWKAAWALIQEMRERWHITPDTVTYTAAISACERSSNCTVALSLVALMEVDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDRVEPDTISFNAAIAACARGGAVEEGRRLLGRMKAQDVDRDTCTYNTLMDGYTRAGSFPDVLHVLDQMGKEGGRARPDVISYTQALSAAEKVGDYEAADRLLAAMKVAGIRWNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEEEGKEGEGVQGXXXXXXXXXXXXXQALIRSERWVDGPVDRAGSPGGQKRKRAPPPLSTGRTRAKTILTRMEREVRRAQVVAGAEKRPGETEDPRSGERVVPGSGQGVCLDRREYHVLLRAICRKGHLAFAHEILQHMVRVHLPPDVTAYNYLVLGYAARGNAAATNALVREMHRKGVEPNVFTFINLVRACTLAGCPEKALSVVDPAFSWDFYSAAITIYHQSGCFAEADALYQQAVLHGKVPVDVTLTPADHALDLHGMSAPVAAAAVRYALKRIREEWWRCGPAAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVVGRESLLAWLEGKE 1143
BLAST of NO22G00550 vs. NCBI_GenBank
Match: XP_005853467.1 (putative udp-glucosyltransferase, partial [Nannochloropsis gaditana CCMP526] >EKU22893.1 putative udp-glucosyltransferase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 325.1 bits (832), Expect = 1.000e-84 Identity = 161/248 (64.92%), Postives = 180/248 (72.58%), Query Frame = 0 Query: 1061 EALLLDMREYHVLLRAICRKGHLAFAHEILKHMARVDLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAVAGCPERALSIVDPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVPVDFSLFRDENLLDLHGLSAPVASAAVRYALGEVREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKE 1309 + + LD REYHVLLRAICRKGHLAFAHEIL+HM RV LPP AC +AGCPE+ALS+VDPAFSWDFYSAAITIYHQ GC+ EAD+LY+ AV+HGKVPVD +L ++ LDLHG+SAPVA+AAVRYAL +REEW RCGP+AVKDLVLISG+GKGSLV F PTLRP VQDMLVEQYYPPIDS TQPGNAGRVVV R SLL+WLEGKE Sbjct: 36 QGVCLDRREYHVLLRAICRKGHLAFAHEILQHMVRVHLPPDVTAYNYLVLGYAARGNAAATNALVREMHRKGVEPNVFTFINLVRACTLAGCPEKALSVVDPAFSWDFYSAAITIYHQSGCFAEADALYQQAVLHGKVPVDVTLTPADHALDLHGMSAPVAAAAVRYALKRIREEWWRCGPAAVKDLVLISGVGKGSLVPFRPTLRPAVQDMLVEQYYPPIDSTTQPGNAGRVVVGRESLLAWLEGKE 283
BLAST of NO22G00550 vs. NCBI_GenBank
Match: EJK53575.1 (hypothetical protein THAOC_26959 [Thalassiosira oceanica]) HSP 1 Score: 106.7 bits (265), Expect = 5.700e-19 Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 0 Query: 1162 PAFSWD--FYSAAITIYHQYGCYPEADSLYRTAVVHGKVPVDFSLFRDEN--LLDLHGLSAPVASAAVRYALGEVREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKEAER 1312 P ++++ Y+ AI H+ G Y EAD LY +G +P D N LDLHG+SA VA A VR AL + +D+++++GLG+ S RF P LRP VQ ML E+++PP+ + + PGN G +++ + + +WLE + +R Sbjct: 1155 PEYTYEKAIYTEAINALHKSGLYEEADQLYAEGATNGHLPWSVMRNSDSNRLYLDLHGMSAAVAHAGVRVALQKEIATAPNDAEVLGRDVMIVTGLGRRSGERFRPVLRPEVQRMLTEEFFPPMGTSSVPGNMGALLIPKSDIEAWLEHQRKQR 1308
BLAST of NO22G00550 vs. NCBI_GenBank
Match: XP_002291682.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90533.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 104.4 bits (259), Expect = 2.800e-18 Identity = 62/171 (36.26%), Postives = 95/171 (55.56%), Query Frame = 0 Query: 1151 GCPERALSIVDPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVP--VDFSLFRDENLLDLHGLSAPVASAAVRYALGEVREEWMRCGPSA--------VKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKEAER 1312 G E +LS D + Y+ +I HQ G Y EAD LY +G +P V S ++ LDLHG+S+ VA +AVR +L ++E MR P A KD+++I+G G+ S RF P +RP VQ ML E+++PP+ + + PGN G ++V + +WL + ++ Sbjct: 1266 GVEEASLS-TDYTYEKAIYTESINALHQSGLYDEADQLYAEGAANGHLPWAVLVSKNTEQLKLDLHGMSSAVAHSAVRVSL---QQEIMRVQPFAPSSGVYSWEKDVIIITGRGRRSGERFRPVIRPEVQRMLTEEFFPPLGTSSIPGNMGALLVPSEDISAWLNNQRQKK 1432
BLAST of NO22G00550 vs. NCBI_GenBank
Match: GAX13066.1 (hypothetical protein FisN_2Hh576 [Fistulifera solaris]) HSP 1 Score: 103.6 bits (257), Expect = 4.800e-18 Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = 0 Query: 1161 DPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVPVDFSLFRDEN---LLDLHGLSAPVASAAVRYAL--GEVREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKEAER 1312 DP + AI+ ++ G Y AD ++ AV +G +P D + +LDLHG++ P+A +AVR A G + + W +V DLV+++G G+ S ++ P LRP VQ MLVE++YPPI + + PGN G + ++ + +WLE + ++ Sbjct: 998 DPTYEIRLVVGAISTLYRDGHYVAADDIFLLAVTNGWIPFDLKRQHVDGGALVLDLHGMNLPMAHSAVRIAFQQGLLTDIWPN-NDKSVNDLVIVTGRGRNSALKMRPILRPAVQRMLVEEFYPPIGTTSIPGNMGALRISSEDIRAWLEFQRQQK 1152
BLAST of NO22G00550 vs. NCBI_GenBank
Match: XP_002297299.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86401.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 103.2 bits (256), Expect = 6.300e-18 Identity = 62/172 (36.05%), Postives = 95/172 (55.23%), Query Frame = 0 Query: 1151 GCPERALSI-VDPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVP--VDFSLFRDENLLDLHGLSAPVASAAVRYALGEVREEWMRCGPSA--------VKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKEAER 1312 G E +LS D + Y+ +I HQ G Y EAD LY +G +P V S ++ LDLHG+S+ VA +AVR +L ++E MR P A KD+++I+G G+ S RF P +RP VQ ML E+++PP+ + + PGN G ++V + +WL + ++ Sbjct: 1211 GVEEASLSTDSDYTYEKAIYTESINALHQSGLYDEADQLYAEGAANGHLPWAVLVSKNTEQLKLDLHGMSSAVAHSAVRVSL---QQEIMRVQPFAPSSGVYSWEKDVIIITGRGRRSGERFRPVIRPEVQRMLTEEFFPPLGTSSIPGNMGALLVPSEDISAWLNNQRQKK 1379
BLAST of NO22G00550 vs. NCBI_GenBank
Match: CBJ28259.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 98.6 bits (244), Expect = 1.500e-16 Identity = 52/102 (50.98%), Postives = 72/102 (70.59%), Query Frame = 0 Query: 1211 LDLHGLSAPVASAAVRYALGEVREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLE-GKEAER 1312 +DLHG S P+A AAVR AL EV R G +A+ DL +I+G+G+GSL F P +RP VQ ML +++YPP+DS T+ GN GRVVV+ ++ +WL+ EA+R Sbjct: 1 MDLHGHSLPLAHAAVRCALVEVWRFSQREG-TALGDLTIITGMGRGSLHAFQPIIRPEVQRMLTDEFYPPLDSATEVGNTGRVVVSAKTIEAWLDHNVEAKR 101
BLAST of NO22G00550 vs. NCBI_GenBank
Match: GAX22747.1 (hypothetical protein FisN_2Lh576 [Fistulifera solaris]) HSP 1 Score: 94.4 bits (233), Expect = 2.900e-15 Identity = 50/155 (32.26%), Postives = 86/155 (55.48%), Query Frame = 0 Query: 1161 DPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVPVDF---SLFRDENLLDLHGLSAPVASAAVRYALGE-VREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKEAER 1312 DP + AI+ ++ G AD ++ AV +G +P D + +LDLHG++ P+A +AVR A + + + +V DLV+++G G+ S ++ P LRP VQ MLVE++YPPI + + PGN G + + + +WL+ + ++ Sbjct: 1002 DPTYEIRLVVGAISTLYKDGHSVAADDIFLLAVTNGWIPFDLKRQDVAGGALVLDLHGMNLPMAHSAVRIAFQQGLLTDTGPNDDESVNDLVIVTGRGRNSALKMRPILRPAVQRMLVEEFYPPIGTTSIPGNMGALRICSEDIRAWLQFQRQQK 1156
BLAST of NO22G00550 vs. NCBI_GenBank
Match: XP_002186028.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65498.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 93.6 bits (231), Expect = 5.000e-15 Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 0 Query: 1153 PERALSIVDPAFSWDFYSAAITIYHQYGCYPEADSLYRTAVVHGKVPVDFSLFRDEN----LLDLHGLSAPVASAAVRYAL-GEVREEWMRCGPSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGKEAER 1312 P LS + ++ Y AIT ++ G Y AD + AV +G +P+ +LDLHG++ VA +AVR AL E+ A + V+++G G+ S + P LRP VQ MLVE++YPP+ +++ PGN G + + + SWL + ++ Sbjct: 1027 PSTGLSATN-SYEVGIYVEAITTLYRDGLYESADDAFIRAVANGILPLQLENCDTRGNRRIVLDLHGMNVAVAHSAVRIALHQEILTASWNHSTVASNEFVIVTGRGQKSAFKMRPVLRPEVQRMLVEEFYPPLSTLSVPGNLGALTIPLEDICSWLNHQRVQK 1189
BLAST of NO22G00550 vs. NCBI_GenBank
Match: EWM27721.1 (Pentatricopeptide repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 80.5 bits (197), Expect = 4.400e-11 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0 Query: 1210 LLDLHGLSAPVASAAVRYALGEVREEWMRCG--PSAVKDLVLISGLGKGSLVRFSPTLRPLVQDMLVEQYYPPIDSVTQPGNAGRVVVARGSLLSWLEGK 1308 L+DLHG S PVA AAVR L + + + + G +KD V I+G+G+ S + F P LRP +Q ML E + PP+ T N GR++V L+ WL + Sbjct: 1056 LVDLHGYSQPVARAAVRAGLKRLCQMYEQTGKREGVIKDFVFITGVGRNSEMPFEPVLRPAMQRMLNEDFDPPLPCETAENNPGRLIVRAHDLVEWLSAQ 1155 The following BLAST results are available for this feature:
BLAST of NO22G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00550 ID=NO22G00550|Name=NO22G00550|organism=Nannochloropsis oceanica|type=gene|length=4816bpback to top protein sequence of NO22G00550.1 >NO22G00550.1-protein ID=NO22G00550.1-protein|Name=NO22G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1326bpback to top Synonyms
Publications
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