NO22G00360, NO22G00360 (gene) Nannochloropsis oceanica

Overview
NameNO22G00360
Unique NameNO22G00360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1904
Alignment locationchr22:141469..143372 +

Link to JBrowse

Properties
Property NameValue
Description3-dehydroquinate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:141469..143372 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR030960DHQS/DOIS
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: EWM21378.1 (3-dehydroquinate synthase [Nannochloropsis gaditana])

HSP 1 Score: 643.3 bits (1658), Expect = 5.300e-181
Identity = 334/417 (80.10%), Postives = 356/417 (85.37%), Query Frame = 0 
Query:   12 LLLLPSL---VHPFLLP--TANTISNP----SRASPLRMVA--ATIGTKDMETVNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYLKATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYC 418
            LLL  SL     PFLLP  T  T S P    SR   + M +  +T     METV+V+LGDRSYPIYIGPGLL+QP LLTQHV GKRCMV+TND VGPLYL   E ILA +PSIQ GD+ +LPDGEAYKDMPTL  IMDAALS KLDRKST VALGGGVIGDMVGFAAAIYQRG+NFIQVPTTLMAMVDSAVGGKTAVNH LGKNMIGAFYQPQCVIIDTDTL++LPDRELASGIAEIVKYGLIRDPELF WLE NMEKL+AREPAAL HAIKRSCENKA IVALDEREG+ GIRATLNLGHTFGHAVETG GYGKWLHGEAVS+GMVMAVDMSVRLGWVD+ +Y RTV LL+RA LPVALPE SGM LEKFE TMS+DKKVSDGVLRLILLKGALG CVFT  YD +VLRETI+AYC
Sbjct:    7 LLLFTSLSASCQPFLLPSRTFLTCSPPTHAFSRGQVITMASSTSTSAVSTMETVHVSLGDRSYPIYIGPGLLKQPNLLTQHVTGKRCMVVTNDRVGPLYLSTAEYILAQSPSIQPGDSLVLPDGEAYKDMPTLNLIMDAALSTKLDRKSTLVALGGGVIGDMVGFAAAIYQRGINFIQVPTTLMAMVDSAVGGKTAVNHKLGKNMIGAFYQPQCVIIDTDTLSTLPDRELASGIAEIVKYGLIRDPELFCWLEDNMEKLLAREPAALGHAIKRSCENKAEIVALDEREGEAGIRATLNLGHTFGHAVETGLGYGKWLHGEAVSLGMVMAVDMSVRLGWVDREVYSRTVGLLQRAGLPVALPEESGMDLEKFEATMSLDKKVSDGVLRLILLKGALGHCVFTSAYDVEVLRETIRAYC 423
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_021759528.1 (3-dehydroquinate synthase, chloroplastic-like [Chenopodium quinoa])

HSP 1 Score: 513.1 bits (1320), Expect = 8.300e-142
Identity = 250/366 (68.31%), Postives = 301/366 (82.24%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V+VNLGDRSYPIYIGPGLL QPELL +HV GKR +V+TN  V PLYL K   A+    P++   +T ILPDGE YKDM TL+ + D A+  +LDR+STFVALGGGVIGDM GFAAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTL++LPDRELASG+AE++KYGLIRD E F W E NM+ L+AR+  A A+AIKRSCENKA +V+LDE+EG  G+RATLNLGHTFGHA+ETGFGYG WLHGEAV+VGMVMAVDMS RLGW+D++L GR   +L++A LP+A PE   MT+E F+  MS+DKKV+DGVLRLILLKG LG CVFT DYD K L ET++A+ +
Sbjct:   87 VDVNLGDRSYPIYIGPGLLDQPELLQRHVHGKRVLVVTNTTVAPLYLDKVINALTKDNPNVSV-ETVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLVDTDTLDTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMDALMARDHVAFAYAIKRSCENKAEVVSLDEKEG--GLRATLNLGHTFGHAIETGFGYGHWLHGEAVAVGMVMAVDMSHRLGWIDESLVGRVHNILKKAKLPIAPPE--SMTVEMFKSIMSVDKKVADGVLRLILLKGPLGNCVFTSDYDKKALDETLRAFSK 447
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_021727602.1 (3-dehydroquinate synthase, chloroplastic-like [Chenopodium quinoa])

HSP 1 Score: 512.3 bits (1318), Expect = 1.400e-141
Identity = 250/366 (68.31%), Postives = 300/366 (81.97%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V+VNLGDRSYPIYIGPGLL QPELL +HV GKR +V+TN  V PLYL K   A+    P++   +T ILPDGE YKDM TL+ + D A+  +LDR+STFVALGGGVIGDM GFAAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTL++LPDRELASG+AE++KYGLIRD E F W E NM+ L+AR+  A A+AIKRSCENKA +V+LDE+EG  G+RATLNLGHTFGHA+ETGFGYG WLHGEAV+VGMVMAVDMS RLGW+D++L GR   +L++A LP+A PE   MT+E F+  MS+DKKV+DGVLRLILLKG LG CVFT DYD K L ET+ A+ +
Sbjct:   93 VDVNLGDRSYPIYIGPGLLDQPELLQRHVHGKRVLVVTNTTVAPLYLDKVINALTKDNPNVSV-ETVILPDGEQYKDMDTLMKVFDKAIESRLDRRSTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLVDTDTLDTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMDALMARDHIAFAYAIKRSCENKAEVVSLDEKEG--GLRATLNLGHTFGHAIETGFGYGHWLHGEAVAVGMVMAVDMSHRLGWIDESLVGRVHNILKKAKLPIAPPE--SMTVEMFKSIMSVDKKVADGVLRLILLKGPLGNCVFTSDYDKKALDETLSAFSK 453
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_004146151.1 (PREDICTED: 3-dehydroquinate synthase, chloroplastic [Cucumis sativus] >KGN55648.1 hypothetical protein Csa_3G002680 [Cucumis sativus])

HSP 1 Score: 506.9 bits (1304), Expect = 6.000e-140
Identity = 242/366 (66.12%), Postives = 300/366 (81.97%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V V+LGDRSYPIYIG GLL QPE+L +HV GKR +++TN+ V PLYL K TEA+    P++   ++ +LPDGE YKDM TL+ + D A+  +LDR+ TFVALGGGVIGDM G+AAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTLN+LPDRELASG AE++KYGLIRD E F W E NM  L+AR+PAALA+AIKRSCENKA +V+LDE+E   G+RATLNLGHTFGHA+ETGFGYG+WLHGEAV+VG VMAVDMS RLGW+D  +  R + +L++A LP+A PE   MT+E F+  M++DKKV+DG+LRLILLKG LG CVFT DYD K L ET++++C+
Sbjct:   91 VEVDLGDRSYPIYIGSGLLDQPEILQRHVHGKRVLIVTNETVAPLYLDKVTEALTIGNPNVSV-ESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMPSLMARDPAALAYAIKRSCENKAEVVSLDEKES--GLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGTVMAVDMSYRLGWIDDTIVSRVLAILKQAKLPIAPPE--SMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRSFCK 451
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_021837924.1 (3-dehydroquinate synthase, chloroplastic [Spinacia oleracea])

HSP 1 Score: 506.1 bits (1302), Expect = 1.000e-139
Identity = 247/366 (67.49%), Postives = 298/366 (81.42%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V+VNLGDRSYPIYIG GLL QP+LL +HV GKR +V+TN  V PLYL K  +A+    P +   +T ILPDGE YKDM TL+ + D A+  +LDRKSTFVALGGGVIGDM G+AAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDT+TLN+LPDRELASG+AE++KYGLIRD E F W E NM+ L+AR+ AA A+AIK SCENKA +V+LDE+E   G+RATLNLGHTFGHA+ETGFGYG WLHGEAV VGMVMAVDMS RLGW+D++L GR   +L++A LP+A PE   MT+E F+  MS+DKKV+DGVLRLILLKG LG CVFT DYD + L ET++A+ +
Sbjct:   96 VDVNLGDRSYPIYIGAGLLDQPDLLQRHVHGKRVLVVTNTTVAPLYLEKVIDALTRDNPKVSV-ETVILPDGEQYKDMDTLMKVFDKAIESRLDRKSTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTNTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMDALMARDAAAFAYAIKHSCENKAEVVSLDEKES--GLRATLNLGHTFGHAIETGFGYGHWLHGEAVGVGMVMAVDMSHRLGWIDESLVGRVHNILKKARLPIAPPE--SMTVEMFKSIMSVDKKVADGVLRLILLKGPLGNCVFTSDYDKEALEETLRAFSK 456
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: ABA54866.1 (putative 3-dehydroquinate synthase [Fagus sylvatica])

HSP 1 Score: 505.8 bits (1301), Expect = 1.300e-139
Identity = 256/413 (61.99%), Postives = 319/413 (77.24%), Query Frame = 0 
Query:   16 PSLVHPFLLPTANTISNPSR------ASPLRMVAATIGTKDMET---VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            PS +   L    N+IS+ SR      AS  +++  ++   D      V+VNLG+RSYPIYIGPGLL QP LL +HV GKR +V+TND VGPLYL K  EA+    P++   ++ ILPDGE YKDM TL+ + D A+  +LDR+ TFVALGGGVIGDM G+AAA Y RG+NFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDTDTLN+LPDRELASG+AE++KYGLIRD E F W E N++ L+AR+P ALA+AIKRSCENKA +V+LDE+E   G+RATLNLGHTFGHA+ETGFGYG+WLHGEAV+VGMVMAVDMS RLGW+D ++  R   +L++A LP   PE   MT+E F+  M++DKKV+DG+LRLILLKG LG CVFT DYD K L ET++A+ +
Sbjct:   51 PSSIELNLNRVGNSISSASRVKSRICASSAQVMDQSVTKSDPTAPTIVDVNLGNRSYPIYIGPGLLDQPHLLQKHVHGKRVLVVTNDKVGPLYLDKVVEALTKGNPNVSV-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGINFIQIPTTVMAQVDSSVGGKTGINHHLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNIQALMARDPNALAYAIKRSCENKAEVVSLDEKES--GLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGMVMAVDMSYRLGWIDDSIVKRVHNILQQAKLPTFPPE--IMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRAFVK 458
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_008448531.1 (PREDICTED: 3-dehydroquinate synthase, chloroplastic [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 1.700e-139
Identity = 242/366 (66.12%), Postives = 299/366 (81.69%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V V+LGDRSYPIYIG GLL QPE+L +HV GKR +++TND V PLYL K TEA+    P++   ++ +LPDGE YKDM TL+ + D A+  +LDR+ TFVALGGGVIGDM G+AAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTLN+LPDRELASG AE++KYGLIRD E F W E NM  L+AR+PAALA+AIKRSCENKA +V+LDE+E   G+RATLNLGHTFGHA+ETGFGYG+WLHGEAV+VG VMAV+MS RLGW+D  +  R + +L++A LP A PE   MT+E F+  M++DKKV+DG+LRLILLKG LG CVFT DYD K L ET++++C+
Sbjct:   91 VEVDLGDRSYPIYIGSGLLDQPEILQRHVHGKRVLIVTNDTVAPLYLDKVTEALTIGNPNVSV-ESVVLPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPDRELASGFAEVIKYGLIRDAEFFEWQEKNMPSLMARDPAALAYAIKRSCENKAEVVSLDEKES--GLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGTVMAVNMSYRLGWIDDTIVSRVLAILKQAKLPTAPPE--SMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLRSFCK 451
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_004287791.1 (PREDICTED: 3-dehydroquinate synthase, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 505.0 bits (1299), Expect = 2.300e-139
Identity = 243/373 (65.15%), Postives = 299/373 (80.16%), Query Frame = 0 
Query:   47 GTKDMETVNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            G   ME V V LGDRSYPIYIG GLL QPELL +HV GKR +V+TN  V PLYL K  +A+    P++   ++ ILPDGE YKDM TL+ + D A+  +LDR+ TFVALGGGV+GDM G+AAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV+IDTDTL++LPDRELASG+AE++KYGLIRD E F W E NM+ L+AR+P ALA+AIKRSCENKA +V+LDE+EG  G+RATLNLGHTFGHA+ETG GYGKW HGEAV+ GM+MAVDMS RLGW+D +L  R   ++++ANLP + PE   +T+E F+  M++DKKV+DG+LRLILLKG LG CVFT DYD K L ET+ A+C+
Sbjct:   75 GAAAMEVVEVGLGDRSYPIYIGSGLLNQPELLQRHVHGKRVLVVTNTRVAPLYLEKVVDALTKDNPNVTV-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVVGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTDTLDTLPDRELASGLAEVIKYGLIRDAEFFEWQERNMDALIARDPNALAYAIKRSCENKAEVVSLDEKEG--GVRATLNLGHTFGHAIETGVGYGKWFHGEAVAAGMIMAVDMSYRLGWIDDSLVKRVHNIVKQANLPTSPPE--SVTVETFKAVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLHAFCK 442
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_022923185.1 (3-dehydroquinate synthase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 505.0 bits (1299), Expect = 2.300e-139
Identity = 242/366 (66.12%), Postives = 298/366 (81.42%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V V+LGDRSYPIYIG GLL QPE+L +HV GKR +++TND VGPLYL K  EA+    P++   ++ ILPDGE YKDM TL+ + D A+  +LDR+ TFVALGGGVIGDM G+AAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTLN+LP+RELASG AE++KYGLIRD E F W E NM  L+AR+PAALA+AIKRSCENKA +V+LDE+E   G+RATLNLGHTFGHA+ETGFGYG+WLHGEAV+VG VMAVDMS RLGW+D  +  R + +L++A LP A P+   MT+E F+  M++DKKV+DG+LRLILLKG LG CVFT DYD K L ET+ ++C+
Sbjct:   86 VEVDLGDRSYPIYIGSGLLDQPEILQRHVHGKRVLIVTNDTVGPLYLDKVAEALTVGNPNVSI-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMPSLMARDPAALAYAIKRSCENKAEVVSLDEKES--GLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGTVMAVDMSYRLGWIDDTIVSRVLAILKQAKLPTAPPD--SMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLHSFCK 446
[Close]
BLAST of NO22G00360 vs. NCBI_GenBank
Match: XP_022965259.1 (3-dehydroquinate synthase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 505.0 bits (1299), Expect = 2.300e-139
Identity = 242/366 (66.12%), Postives = 298/366 (81.42%), Query Frame = 0 
Query:   54 VNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL-KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKSTFVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHALGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFVWLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLGHTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKLLERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVFTKDYDAKVLRETIQAYCR 419
            V V+LGDRSYPIYIG GLL QPE+L +HV GKR +++TND VGPLYL K  EA+    P++   ++ ILPDGE YKDM TL+ + D A+  +LDR+ TFVALGGGVIGDM G+AAA + RGVNFIQ+PTT+MA VDS+VGGKT +NH LGKN+IGAFYQPQCV++DTDTLN+LP+RELASG AE++KYGLIRD E F W E NM  L+AR+PAALA+AIKRSCENKA +V+LDE+E   G+RATLNLGHTFGHA+ETGFGYG+WLHGEAV+VG VMAVDMS RLGW+D  +  R + +L++A LP A P+   MT+E F+  M++DKKV+DG+LRLILLKG LG CVFT DYD K L ET+ ++C+
Sbjct:   86 VEVDLGDRSYPIYIGSGLLDQPEILQRHVHGKRVLIVTNDTVGPLYLDKVAEALTVGNPNVSI-ESVILPDGEKYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVVVDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMPSLMARDPAALAYAIKRSCENKAEVVSLDEKES--GLRATLNLGHTFGHAIETGFGYGQWLHGEAVAVGTVMAVDMSYRLGWIDDTIVSRVLAILKQAKLPTAPPD--SMTVEMFKSIMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDETLHSFCK 446
The following BLAST results are available for this feature:
BLAST of NO22G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21378.15.300e-18180.103-dehydroquinate synthase [Nannochloropsis gaditan... [more]
XP_021759528.18.300e-14268.313-dehydroquinate synthase, chloroplastic-like [Che... [more]
XP_021727602.11.400e-14168.313-dehydroquinate synthase, chloroplastic-like [Che... [more]
XP_004146151.16.000e-14066.12PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
XP_021837924.11.000e-13967.493-dehydroquinate synthase, chloroplastic [Spinacia... [more]
ABA54866.11.300e-13961.99putative 3-dehydroquinate synthase [Fagus sylvatic... [more]
XP_008448531.11.700e-13966.12PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
XP_004287791.12.300e-13965.15PREDICTED: 3-dehydroquinate synthase, chloroplasti... [more]
XP_022923185.12.300e-13966.123-dehydroquinate synthase, chloroplastic-like [Cuc... [more]
XP_022965259.12.300e-13966.123-dehydroquinate synthase, chloroplastic [Cucurbit... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004243NSK004243Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00360.1NO22G00360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595365gene_7035Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100424g3gene9040Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00360.1NO22G00360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00360 ID=NO22G00360|Name=NO22G00360|organism=Nannochloropsis oceanica|type=gene|length=1904bp
ATGCCGGTGGCAAGCCGCTGCTTCCTGCCTCTCCTCCTCCTTCTCCCCTC
CCTCGTCCACCCTTTCCTCCTCCCCACCGCCAACACCATCAGCAACCCTT
CCCGTGCCTCTCCTCTCCGCATGGTTGCCGCCACGATAGGCACAAAGGAC
ATGGAGACTGTCAATGTCAACCTGGGAGATCGCTCCTATCCCATCTACAT
TGGCCCCGGCCTGCTCAGGCAGCCTGAGCTCCTCACCCAGCACGTGGCGG
GGAAACGTTGCATGGTCATCACCAACGATgtgcgtctcaatccctctttt
ctattgttccagacatgtacatactgtcctccctcctctcttctcttttt
ccttgtgtgtgactttctaacttgtcgtggccactgacagatcttgtgtg
tctgatccctccctccctccccccctccctccccacatcccttctttcat
tcttccgttctctcatagCTCGTCGGCCCTCTCTATCTTAAAGCGACTGA
AGCAATCCTAGCCACGGCCCCGTCGATCCAACAAGGTGACACCTGCATCT
TACCTGATGGCGAGGCTTACAAAGACATGCCTACCCTCATCACAATCATG
GATGCTGCCCTCTCAAAGAAACTCGATCGGAAGAGCACGTTCGTTGCGTT
GGGAGGAGGGGTAATCGGAGACATGGTGGGCTTTGCCGCGGCTATTTATC
AAAGAGGGGTAAATTTCATTCAGGTTCCCACCACATTGATGGCCATGGTA
GACTCGGCGGTGGGAGGCAAAACAGgtgaggagggagggagggaaagagg
gaggggtggaaggcaagacggatgtatgtatgtttttggccgatatgagt
caagaggggagggagagaaagcgggattcatgtaatgcactattttgact
cacgttccaggtcacgagtccagctctctatcagcgccattatagtactg
tccttacgcgaagtgaaggaaatctcataggtccctccctctctctctcc
ctctcaagCCGTGAACCACGCCCTAGGCAAGAACATGATCGGTGCATTCT
ATCAGCCACAGTGCGTCATCATCGATACCGATACACTCAACTCCCTTCCG
GACCGAGAGCTGGCTTCGGGCATTGCCGAGATCGTGAAATATGGTCTAAT
TCGgtacgcccttcgctttctcccgccgtcgttccctccctccttttttc
ttacccctgtctacgtgcatctcgccctccctgtatgtgttttgatgagt
gggcgaacaatctcgcatacaccatttcaagcaaggctatgaataaaaac
cgaaacccaaaaacaaagacaaatcagtgaactaatcttactctctctcg
ccgcactttatacattctttataaaaagGGACCCCGAACTCTTCGTCTGG
CTGGAGGCGAACATGGAAAAACTCGTTGCCCGCGAACCGGCCGCCTTGGC
GCATGCCATCAAAAGATCATGTGAAAACAAAGCGGCCATCGTGGCGCTCG
ATGAGCGGGAGGGCGATGTGGGGATAAGGGCAACGCTGAACTTGGGCCAT
ACGTTTGGGCATGCCGTTGAAACGGGTTTCGGCTACGGAAAATGGCTCCA
TGGTGAGGCCGTAAGCGTTGGGATGGTGATGGCGGTGGATATGTCTGTTA
GACTGGGTTGGGTGGATCAGGCGTTGTACGGTCGAACAGTCAAGCTGTTG
GAACGCGCGAACTTGCCTGTTGCGCTCCCAGAAGGGAGTGGGATGACGCT
GGAGAAGTTCGAGGAGACGATGAGTATTGATAAGAAAGTGAGTGATGGGG
TGTTGAGGCTGATTTTGTTGAAGGGTGCCTTGGGTCAGTGTGTTTTTACT
AAGGACTATGATGCGAAGGTGTTAAGAGAAACAATTCAGGCGTACTGTCG
GTGA
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protein sequence of NO22G00360.1

>NO22G00360.1-protein ID=NO22G00360.1-protein|Name=NO22G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MPVASRCFLPLLLLLPSLVHPFLLPTANTISNPSRASPLRMVAATIGTKD
METVNVNLGDRSYPIYIGPGLLRQPELLTQHVAGKRCMVITNDLVGPLYL
KATEAILATAPSIQQGDTCILPDGEAYKDMPTLITIMDAALSKKLDRKST
FVALGGGVIGDMVGFAAAIYQRGVNFIQVPTTLMAMVDSAVGGKTAVNHA
LGKNMIGAFYQPQCVIIDTDTLNSLPDRELASGIAEIVKYGLIRDPELFV
WLEANMEKLVAREPAALAHAIKRSCENKAAIVALDEREGDVGIRATLNLG
HTFGHAVETGFGYGKWLHGEAVSVGMVMAVDMSVRLGWVDQALYGRTVKL
LERANLPVALPEGSGMTLEKFEETMSIDKKVSDGVLRLILLKGALGQCVF
TKDYDAKVLRETIQAYCR*
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Synonyms
Publications