NO22G00190, NO22G00190 (gene) Nannochloropsis oceanica

Overview
NameNO22G00190
Unique NameNO22G00190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length9023
Alignment locationchr22:74532..83554 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:74532..83554 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO22G00190 vs. NCBI_GenBank
Match: EWM19997.1 (hypothetical protein Naga_102382g1 [Nannochloropsis gaditana])

HSP 1 Score: 71.2 bits (173), Expect = 2.800e-8
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1290 FETAVEEWSATQRPVNDLLSSPPSSFPPSSSFSLFFPREISPVARLDAAYSSSSCGGWTYVPL 1353
            F +AVEEW+  QRPVN LL+SP  +  PSS  S FFP  +SPV +L+ A ++ +C GWT+VPL
Sbjct:    2 FGSAVEEWTERQRPVNHLLASPTPASLPSSPASSFFPLALSPVGKLEEAMAAQACWGWTHVPL 64          
The following BLAST results are available for this feature:
BLAST of NO22G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM19997.12.800e-853.97hypothetical protein Naga_102382g1 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00190.1NO22G00190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00190.1NO22G00190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00190 ID=NO22G00190|Name=NO22G00190|organism=Nannochloropsis oceanica|type=gene|length=9023bp
ATGACGAGGGGCGAGGTGCTGGCAGGGCTTGAGGAGGAGgttagaaggat
gcgggagggagggagggagtgcgggagggagggggagggggacggaggag
aaacggaagatcggcgcactcaacgctgcctgaagcgcacaacaacaact
cacattttcccttcgcccctccctccctccgtccctccatccccctccct
cagGGCCTTCTCTCCACCCTCTTCTCCCCCTCCCTCTTCCTCCTCCACCC
CTCCCTCCCCCTCTCCCTCCCTCCTCAAGAGCTCCACACCCAGGGCCATG
CCTCGCTCTCCCTGGCCCTCACCCTCTGCCGTTTTGAGGGAGGGATGGAG
GAGCGATGGTGGGAGGGAGGTGGAGGGCGAGAACTCGTGATGACCCTACT
GCAGgtgaggaagaaggaagggagggagggagggagggagggagggaggg
aggaagggaggaagggagggaggaaaggaggaagtgaggaagggagggag
gaaaagagagaaaagacccatcatatatatatatatatgtataatacata
tacatatactatatagtaattttaaaaatccttttacataaatatatatg
tactacacacacacacatatatatatgtatatattatagttaaaaaaata
tcatacatgttattttaaaaaaagaataattatttatctcaaagaatatt
tatttatccagggctaatcccctcccaccctcgctaaaccccacctacag
GAGTCATCCCTCCCTCCCGCCTTCGGCGCCCTCGTCCTTCAGATTCTCTG
GGCTGCAATACAGgtgccacgcctctccctccctccctccctccctccct
tcttccctattttctcctcttttcttcaattcattcatgcatacgttgcc
tcgacctcttccctccctccctccttccctccctcctgccccctctttcc
ctccacacatctctcaccatccttcccctccctccctccctccctccctc
cctccctccctccttccctcctttcagGCCCCCGCCCTCCTTTCTGACTA
CTGCGACGGGGGCAAGGCCCACCCCTCCCTTGTGACCTCCCCCTCGACCT
CCCTTTTCCAAGAAACCATCCTCTTTCTTTCCAAgtgagcgccttcctcc
cccccctccctctctccctccttccacccctccctccttcttgacctccc
tcctttcctcccttcctccctctttccctccctccctccctccttcagAC
GACACCTCTCCCCCTCCATCTCTCGCTTTGGTCGTCGCCTCCTTCTTCGA
GCCGCACTTCGAGAAGCCCTTGAAAGGAGCGTTCGTGCGGCAGgtaggca
gggagggagggagagagggagggagggagcgaggaaaggaaggagcagta
tttttgtttgcttcttgagcgatccgatgcagcagaggaggagggaggga
tgaatgaagcaagggaagattcatttaaccccccccccccccaccctctc
tatatatactctctctctatatacatacacatacacacacacacatatat
atatatgtatatatatatctgtatatatacatatatacatatatacatac
atacactataatattcacacaaatacatcctaccccaccgaattgcctct
cggcgccgcggctcttggatatacatacctatacacaaatacacacaaac
aaatacacacctacacacacacgtactcatacacatacacgcacacatgc
atcactgcctgtctctagGCGCCGCGGCGGAGAGAGGGCTCTTGGATTTC
CGGGGACGGGTGAAGAGCCTTGCTCAGCGATTGGAGGAGGAGGAGGAGGA
GGAGGGGGAGGGGGAGGGAGGGAAAGGGGGGGCATCGTCGCTGCCGTTGC
GGCTGTGCTTGGCACTGGCGGACGTGAGGAAGAGGCTGCAGCAGGAGGAG
GAGGAGGAGGACGAGAGGGAAGGAGTGAGGGAGGGAGGGAAGGAGGGAAG
GCTGGAACGAGGACGCGCACTATTGCGGTTGTTCTCGGCTTATGAGTACA
TCAAGgtaggtagatagggagggagggagggagggagggagggagggaag
gagacaagtttacctgcttgcatcatcaggctttcatcctccctccctcc
ctccctccctttatccctccttccattctctccagGTCCTCGCCACTGCT
GCCGCTCTCGCTCTGGCCTCCTCCTTTCGTCCATTGTGGGATGAGGTCGA
TTTCTCTCTCTCCTTCCTCCTTTCCTCCTCCTCCTCCTCCTCCTTCTCCT
CCTCCTCGCCCTCGCCCTCTCCCTCGACCTCGACCTCGACTGTTGCCTTG
CCAATAGTGGCCTTACTCAAGGAGGATATCGAGgtggggagggtgggagg
gaggagagtgaacggagattgcacttgcaggtgatacggcgctaaaattg
acgtcctcccttgtcgtcctccctccctccctccctccctccctcgttcc
ctccccccttccgtcaccagGCCACCACCACCCTCCTCTCCTTCCTCTCC
TACTGCGACTCCCCCTCTTTCCTCCTCCTCCACTACCGCCTCGCCGCCCA
CCACTTCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCTTCCTCCCTGGAGA
GGAGGGAGGCGTTGCGGTGCTTGGCAAGGCTGGCAGGGAGGGAGGGAGGG
AGGGAAGCCATCTATCAGgtaggtaggtagagagagcgggagggcggggg
ggaagaagccatgtcatttcatcagggatggagggagatcctttagcggt
gcctccacacttattcacttccctccctccctccctccctccctcccttc
ctccctccctgcccccctgccctccttctctccttcctcagGAGTTGACA
CCCGCTTTTTTCCCCTTCCTCGAGGCGAGTCTCCCTCCTCCTCCTCCTCC
TCCTCTTCCTCCTCCTCTGGCCTTTGCCCGTGCTGAGAACAGGAGGACGA
AGGAGAAGGGGAGAAAGAAACGAAGGAAGGAGGAGGAGGGGGCGGAGGAG
GACGAGGAGGAGAAGGAGGAAGAGGAGGCGGAGGAGGAGGAGGAAGAGGA
AGGATGGATCGCGGGGACTTATCTCTCAATGCTACTGCTCGCCCTGGTGG
TGGAGGAGgtgagggagggagggagggtgggagggagggagggagggaag
cagggagtgcgttgtgctccaattattgtattcctcacttccctctcccg
ccctcccgccctcccgccctctcgccctccctccagCCCTGCCCCCCTCC
CTCTTTCCTCCAGCTGCTGGCCGACCACGGAGTCCCTTTCCTCGAGGCCC
TCGCTACTGTATTAACGGgtgaggaacaagggacggagggagggagggag
ggaaggatatgtaggagatagcttctcctcgtttggtttcggttacccac
tgcagtctctccctccctctctccctcgctccctcgctccctcgctcccc
tccctccctccgtccctctgtccctccctccgtccctccctccttagACC
TCCCTGTACCCGAGAATGACAGCGCTCGCTTTTCCCTCGTCCGCTCCTCC
CTGGCCCCACTGACGACATGGGAGGAGGAAGGGTTAGAGGGCACCCTCTC
TCTCCTTGAGGAGCTGACGATGgtagggagggagggagggagggagggag
ggatgggagggagggagggagggagggagggagggagggcagaggagctg
agagggagggtgggagaaagggaggggagagagggagagagggaggaagg
gagggagggagggatggaaggagttatccccctctcatgcaactcagttt
attcaccttctttttcttaatggtgatggcagGAGGCGTTTTCAGCACAC
GAGGAGGAGGACGAGGAGGAGGAGGGGGGCGGGAGGGGGGCCGGGAGGGA
GGACAAGGAAGAGGAAGAGGGCTCGCTGTTGCAGCTACGGACGTGCTTCC
TCCTCTTCCACCTCGCCCCTCCCTCCTCCTCAACCTCCCTCGCCGTCTTG
GCCGAGCAGGGGCTGCGACAGgtgaggaaggaagggaaagagggagggag
gaagggaagaaaggaggggtgttgtgtgtatactttttccacctcctccc
tccctccctcctttccttcatcctttcccccttcccctcctccttccctc
cctccctccctcctttccttcatcctttcccccttcccctcctccttccc
tccctccctccctacagGTGCACAACAAAATCAAGCGTCAGCAGCAGCAG
CAGCAGCAGCATCATCATGAGCAAAGACGCAGCTGCCCTTCCCCCCCGCC
TGCCCTTCTCTCCCTCGCGCTTGCCTGTCTCTCCCTTCTGGTGGAAACCG
AGGGCGGGAGGGAGGGAGGGAAGGAGGTGGCTCTTGAGCTCTACGTGTCG
CTGCGAGAGGGCCTCGGGGGCGCCTTTTTGGAGACTCCGCCGTCACCGTT
Ggtaaagagggagggagggagaggggggaagacgatctgcctcccccaca
tttcttttctaggttaatgcgccttaaccttcccctcctccctccctcct
ttcctccctccctcccccgctcccttttttttccctccacagATCCAGAG
GTATCACCTACTCCTCCTTTCCCTTCTACTCGGCCACACGGGTCGAAGGA
GGAAGGGAGGGAGGGAGGGGGGGGGAGAGGTGGGCGTTGACGAGGAGGCG
GACCGACTGGCGTTTCTACTGGGATTCATAAATCGAGGGCCACCCATTCG
AGgtagggagggaggtagggagggagagagggagggagggagggagggga
agaaggagggacgtagggggggggcaaccgaagaaggaggaggaagggac
ttagagagggagggaaggagggagggagtgagagagggagggagggaagg
agggagggagggagggcaacaagtccagcgttcaacctccctcctccact
cattgatatccacagCCATCATCTGCGGCCCTCTCCTCCTCCGCTTCCTC
CCTCCCTCCCTCCCCCTTCCCTACACCCCCTCCTCCTCCTCCTTCTCTTT
TTCCTCGCCCTCCTCCCCCTCTTCCCCTCTCCCTGCTTCGCAAGAGCGCT
CCCACCGGCTGGACGTTTGGGAGCCTGCACTGTTGCACCGGAGGGAGGGC
GGGAGGGAGAGCGGGGGGGAGGAAGCACCGAATATGGCGAGGCTGGCCCC
TCTTGTTCTGTCATTGGCGGTGTCGGGATTTCCACGGATGAGgtgaaggg
ggagggagggagggagggagggagggacagagggagggatggaggggtgc
acgtgattcggatggtaagtcttacgccctctcacctcccctccctcgcc
tccctccctcccttcccacctacctagACAAACAGCCGTGCAGCTCGCGC
GTCAAGTGGTCGACGTCTCTCCCTCGGTGGGCCGGGCTCTCCTCTCCTTC
CTCCTCGCCCGCCTCCGCTCGCTCCTTGAAGATGCCCTGGTCGATGTGGC
GGCCGCTGGGTCCTCGAGCGgtcagaagggcgcgggaaggagggagggag
ggcgggaaggaaggaaggagggagggaaggagaaatcgtggcatgtaatt
gtgtcttttgtgtgtagccccgtatgtgtgtgttgttatgtatgtacgta
ttgcgagggagggaggaatcgtagcacttgtgtgtagtcttatatgtgtg
ttgttatgtacattgtgattgcaaattgattaatcgtcatgtatgcaatt
gtcatggtaatctatcaattattcatattacgtattgaaaatcatgttac
aatttattacaattgatacgtttaatgttaattaactgaattaatcgatg
taatttacgggaacaccagATGATTGCTCCCGGGCCTTGCCGCGCTTGGA
GGGAGTTGTGGCACTGCTTCACGCCGTGGTGCGAGAGGGCAGTCCAATGG
gtgggtacagggggagggagggagggagggagggagggagggaggaaggg
agggagggagggagagaggaggaacatgccctcttggcaaacgattacga
acttttctctcccttcgtcccttctttcctccctctttccctccctccct
ccttcccgcagGCGCCCTCCTCCTCCTCGAGCAAGGAGAAGCGCACACGT
TTCCCCTTCTCTGTGCCTGTCTCCTCCTACCCCCCTCCTCCCTTCCCCCC
TCCCTCCCCCTGGCCAGGAAGGTGGTGGCGTTGCTGTCGCTGCTAGCTGA
CCCCGGCTTCCTGCATgtagggagggagggagggacggaggaagggaatg
gtgctgatgatcacaccctcgtttggcgttgttcacattccccccctccc
tcccgccctccctcccgccctccctcccgccctgcccctgccccaagGAC
GAACACGCCTCCTTCCGCCCCCCCGGCCTGCGCGGGCAGCGGCTGGTGGA
CCCCCGCGCTGTCTCTCTCTCTTGCCATGACGCCGTCCAAGCCACTCTCA
GACGgtccgtctgtccctccgtccctccctccgtccctccgttcctccct
ccctcgtctctctccttcctggacgttgtgctaatcattcacgtctccct
ccgcggcccctccctccctccctccctccctccctccctccgcccacccc
tgcctccgcccctccctccctccctagCTCCCTCCCCGCGGTAGCCCACG
TCCTCAAGCGCTCCCTCCTCCGGTGGGGAGGCGGGAATGCTTCTCTCCTC
GTGCCTGCCATGCACGTCCTCGTCAGTGCTGGACAGgtgccttccctccc
tccctccctccctccctccctccctccctccctccctcccttcctccctc
cctccctccctcccttcctcccttcctccctccctccctccctccctccc
tccctccctccctccttccatctcgatgcctcgcgctcacgccgtgccca
gatccaccaagaagagcctgcctgttctcactcctccccctcccccctcc
ctccccccctccctccctccctccctcctctgccaccagGTCTGCGGTCC
TCGTGTGTTTATCCACGACATTCCCGGGACGAGCAAGAAGAGCGCTCCTG
TCTTTGCCCCTCATTTTTTCATCAACAAAACGGCCGCATTGCTGGCCAGA
GAGgtagggagggagggagggagggagggagggagggagggagggaggga
gggagggagggagggagggagggagggaggtagaaatcttagttcccctc
tagctttcgcccgccaaacacacgcacacacaagcaccacgcgtataaca
cacgacctacacaacgcataacccaccgcgtataacacacgacctacaca
acgcataacccaccgcacatgacagCTGTCAGTGCTGGGAGGGAGGCTAG
AGGACAAGTATCACCTTTTTCTCTCCTCCTCTTCCAACCCCCACTCGTCC
TCCTCGCTTCCTCCCAAGgcacgtcctccctcctccctccctccctccct
ccctccctcattcggggcttcccccccccccctgccattcatcctccctc
cctcccctccctccctccctccctaccccccctcccagCTGCGCGCCGAG
GCCGCCCGTCTGGCTCTAGTGGAGGCTCAAATTTATCAAACCCTCGAAGC
CGCCGCCTTCCTCTTGGCCCTCCCAGgtggggagggaaggagggagggga
gggagggagggagaaaagggagggaggacggaagaaaggaaaagaaggtg
ggcagggtactgtccacgcatccaccgatcctcccttccccccttcctcc
tttctcctttattccccccctccctccctccccccctcccttcctccctc
cctccttcagGCATCACGGCTGCCCTCTCTCCGGCGGGCACCAAGCCGAT
GATCCGGGTATGGTTTGCTGCCTCTCGGAAACAACCCCCGACGCTCCCTC
CTGACTTGGACGCACgtaagaaagagaaaggagggaggaagggaaggagg
gaggaagggaaggaaagagggagggagaaagtgtgttttgggctgtatcc
tgccattcattcacaccctctcctccctccctccctccctccctccccag
TCGAGGAAGCGCTCAACACAATCGAAGAGCGGGTCATTGTCCTGACCAGC
GCCGTTGCCGCCGCCTCCTCCTCCCCTTCTCTCTCTTCCCCTCCCTCTAA
TGCATCAACCTCCTTCACTTCCTTCTCCCTCTCGGAGGGGGGGTGGGGGA
AGGAGGACGGGGGGGTGGTCGACCTCCCCCCCCTTCTCGCCCTTCCTCGG
CGTCTGCAGGCCACACACCGTCTCCTCTCTTCCCTTCGCGCTCTCCACGC
ACAGGAGGAAGGGAGGGAGGGAGGGAAGGAGGGAGAGCTGCCAGCGCCCT
TGGATTTGAGAGAAGCCTTCCGAGAGAGGGACCAGAAGACGGTGCTCCAG
gtaaggagggagagagggcggatgggaatggaggaaagcgagggtgccgg
gcagacacagggaagaagaaaagaggacgggagggagggggaaaggggag
gaggaagggaaaaagtaagaggaagaaaatcaaaaccaatcgtctcttct
ttttcttctttttcattttcaacagTTCGAAACGGCCGTGGAGGAATGGA
GCGCAACTCAACGCCCCGTCAACGATCTCCTTTCCTCCCCCCCTTCCTCC
TTCCCTCCCTCCTCCTCCTTCTCCTTGTTCTTCCCGCGGGAGATCTCACC
AGTGGCGCGGCTCGACGCTGCGTACTCATCCTCTTCCTGCGGGGGATGGA
CTTACGTCCCTCTCCATCTCACTGCTGCTGTTGCTGCTGCTGCGGCGGCG
GCGGCGGCGGAGGGAGGAGATGAAAAATGGAGTGAGGAAGGGAAGGAAAG
GGAGAGAAAGAGGAGAAAAGTGGAAGTGGAGGGGTACGGAGAGGGAGAGA
GGGGAGACACGCCACCTTACTGA
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protein sequence of NO22G00190.1

>NO22G00190.1-protein ID=NO22G00190.1-protein|Name=NO22G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1405bp
MTRGEVLAGLEEEGLLSTLFSPSLFLLHPSLPLSLPPQELHTQGHASLSL
ALTLCRFEGGMEERWWEGGGGRELVMTLLQESSLPPAFGALVLQILWAAI
QAPALLSDYCDGGKAHPSLVTSPSTSLFQETILFLSKRHLSPSISRFGRR
LLLRAALREALERSVRAAGAAAERGLLDFRGRVKSLAQRLEEEEEEEGEG
EGGKGGASSLPLRLCLALADVRKRLQQEEEEEDEREGVREGGKEGRLERG
RALLRLFSAYEYIKVLATAAALALASSFRPLWDEVDFSLSFLLSSSSSSS
FSSSSPSPSPSTSTSTVALPIVALLKEDIEATTTLLSFLSYCDSPSFLLL
HYRLAAHHFLPPSLPPFPPSSLERREALRCLARLAGREGGREAIYQELTP
AFFPFLEASLPPPPPPPLPPPLAFARAENRRTKEKGRKKRRKEEEGAEED
EEEKEEEEAEEEEEEEGWIAGTYLSMLLLALVVEEPCPPPSFLQLLADHG
VPFLEALATVLTDLPVPENDSARFSLVRSSLAPLTTWEEEGLEGTLSLLE
ELTMEAFSAHEEEDEEEEGGGRGAGREDKEEEEGSLLQLRTCFLLFHLAP
PSSSTSLAVLAEQGLRQVHNKIKRQQQQQQQHHHEQRRSCPSPPPALLSL
ALACLSLLVETEGGREGGKEVALELYVSLREGLGGAFLETPPSPLIQRYH
LLLLSLLLGHTGRRRKGGREGGGEVGVDEEADRLAFLLGFINRGPPIRAI
ICGPLLLRFLPPSLPLPYTPSSSSFSFSSPSSPSSPLPASQERSHRLDVW
EPALLHRREGGRESGGEEAPNMARLAPLVLSLAVSGFPRMRQTAVQLARQ
VVDVSPSVGRALLSFLLARLRSLLEDALVDVAAAGSSSDDCSRALPRLEG
VVALLHAVVREGSPMGALLLLEQGEAHTFPLLCACLLLPPSSLPPSLPLA
RKVVALLSLLADPGFLHDEHASFRPPGLRGQRLVDPRAVSLSCHDAVQAT
LRRSLPAVAHVLKRSLLRWGGGNASLLVPAMHVLVSAGQVCGPRVFIHDI
PGTSKKSAPVFAPHFFINKTAALLARELSVLGGRLEDKYHLFLSSSSNPH
SSSSLPPKLRAEAARLALVEAQIYQTLEAAAFLLALPGITAALSPAGTKP
MIRVWFAASRKQPPTLPPDLDALEEALNTIEERVIVLTSAVAAASSSPSL
SSPPSNASTSFTSFSLSEGGWGKEDGGVVDLPPLLALPRRLQATHRLLSS
LRALHAQEEGREGGKEGELPAPLDLREAFRERDQKTVLQFETAVEEWSAT
QRPVNDLLSSPPSSFPPSSSFSLFFPREISPVARLDAAYSSSSCGGWTYV
PLHLTAAVAAAAAAAAAEGGDEKWSEEGKERERKRRKVEVEGYGEGERGD
TPPY*
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