NO22G00180, NO22G00180 (gene) Nannochloropsis oceanica

Overview
NameNO22G00180
Unique NameNO22G00180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1716
Alignment locationchr22:72742..74457 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:72742..74457 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00180.1NO22G00180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00180.1NO22G00180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00180 ID=NO22G00180|Name=NO22G00180|organism=Nannochloropsis oceanica|type=gene|length=1716bp
ATGAGCAGCGCCGTTACTGACACGTCCTCCACTTCGTCCCTCCTCTTCTG
CGGCAGCTTTGCACGAGGGAAAAATGGGGATTACGACTTTCAGgtaaaac
tgtgtgtgaggagagggtggagaattggacgtaggaagggagaggggaaa
aaggaggacggtgagggcggggtaggataatcacatctgacaacgaataa
atgctatagGGGTTGGACATCAAACCTGCCGCTGGGGGGCGAATGCAAGG
AGGAGGGGAACAGGAGGATGAGATTGAGCTGTCGCACCCCGTTCGACTCA
GGGCGGTGCGGGTGGTGCGCCAAGgtgaggaggaaggagggagggaggga
gggagggagggagggattgagggaggaagggagggagggcagggctggac
tggatggttgtaccctaggggaaaaggaaatggatagggatgaatattaa
tgaaagccaacaaaatcaaacagGGATGTCGCTCCCCTGTCCGGAGGCGA
CGCCCCTGACCCCTGAGACCCTTCCTTCCTTCCTCCTCGCCGGCTTTCCT
GCCCTCCCTCCCTCCCTCCCCCTCACCGAGGAGGCGTCAGGCCATGATTT
GGACGCGGGACCGCCCTCTTTTTGGCTGGAAGTGAATGGGATAGCAGTTA
AAGAGGGGGAGGGAGAGGAAGGTGAGGGAGGGGTGGGAAGGCAGAGAGTG
CCTCTCTTGCCCTCGACGCAGgtgagggcgggagggagtgagtgagggag
tgaggaagcgagggagggagaaagagagaaagagagagagggagggagag
aaagagggagggaggacgttactataaaatacatgcttgcaggacgggca
tgatttgcactagagaaaaaaaaagagtgtgacatttcctccctccctcc
ctccctccctcccgccctccctccctccctcttcaactgcgcactgcgca
gATCACTGCGGGCAGCGACGAGGAGCTGGCTACAATCTCGACGTCGGTAA
TCGTAGACCGGCTGCTGGTGAAGgtagggagggagggagggagaaaatca
ctcgtgacgagaaaggcataaaataaaaaagtcaaaccctattcattcgc
cccctccccccccccctccctcccgcacccccttcctccctctcttccca
gGGATCCTTCACTCGTGTGTTCCTGGCATTCTACGGCGAGCTGCTGCAAC
GAGGCGGCTCCTCCACCCCATCCTCCCTCCCGCCCTCCTTCCTTCATCCC
CTCTGGCGTCCACGTCCATTGCCCTCCCTTCCTCCCTCCTACCCTCCCTC
CCGTCCTCCCTCTCCTCCTCCATTGCTACCGCCCATGTCGGTGTTGCTGG
AGGGAGGGACGAAGGAGAGCGACGAGGAGGAGAAAAAGCGgtaggggtgg
agggatggagggatggagggagggaggagagccataaagtcgtcctttgc
tcttccacagggagaaaaggagggagggagggagggacagtggcaaggaa
gcagtcacccacctccctcccttcccctgtcatttatcctttgaattaca
cgcacattaaaccagGCCTGTCTCCCTGTCTGCGTATACGGCGCTTGTCT
CCCTCCTCCGGCAGCAGCAGCAGCAGCAGCAGCAGAGGAGGGAAGAGGCA
GAGCAAGAAGGAGGAGGGGGGGGGGAGAAGGAGAGGGAGGAGGAGGAGGA
GGGGCGGCAGCAATAG
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protein sequence of NO22G00180.1

>NO22G00180.1-protein ID=NO22G00180.1-protein|Name=NO22G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bp
MSSAVTDTSSTSSLLFCGSFARGKNGDYDFQGLDIKPAAGGRMQGGGEQE
DEIELSHPVRLRAVRVVRQGMSLPCPEATPLTPETLPSFLLAGFPALPPS
LPLTEEASGHDLDAGPPSFWLEVNGIAVKEGEGEEGEGGVGRQRVPLLPS
TQITAGSDEELATISTSVIVDRLLVKGSFTRVFLAFYGELLQRGGSSTPS
SLPPSFLHPLWRPRPLPSLPPSYPPSRPPSPPPLLPPMSVLLEGGTKESD
EEEKKRPVSLSAYTALVSLLRQQQQQQQQRREEAEQEGGGGGEKEREEEE
EGRQQ*
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Synonyms
Publications