NO22G00150, NO22G00150 (gene) Nannochloropsis oceanica

Overview
NameNO22G00150
Unique NameNO22G00150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2875
Alignment locationchr22:60728..63602 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:60728..63602 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00150.1NO22G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631588gene_7010Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00150.1NO22G00150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00150 ID=NO22G00150|Name=NO22G00150|organism=Nannochloropsis oceanica|type=gene|length=2875bp
CACGTCCTAATCCCCTCCACTTGCTTGCAATTAAAGCACTTCAATGTCAA
CATCGCTGAGCTATCCAAACAGCATACTTGCGTTAACCTTTGTGCTTTGT
ATGGCTTTACCTGCTTATGGCTTGCGCAAAGCCTCGCACTCTCACATTCA
AGTTCATGATCTATCTCCCAATTTTACGTTCCATTCTCTGTTCGGTCCTC
CTCCTGTCCCCGACCCGGGCACATAGATAGTTTGCCCGTCACGAAATAGA
CCATTCATTCACGTCTGTGCTAGACATATGTGTGCGCTTTCTTCTACTGG
CGCCATCAATGCACATCTTCCCCTCTACTTTTTCAACCTTCTCAATCCAT
CACTCCGCCTGCCCTGCCGTCCTTTCTCTTCACTCCCTCCTCCTCAACCA
CATACAGACACAGACGCATCCCTAGCGCTGACCATACTCCACCCCCTACC
GCAAATCATGCCCTCCTTTTCACCCATCACCTTTGTCGACCTCCCCAAAT
ACGGTATCTCTTACGAGACCAAGTCTCAGAAGCGATACGTTGCAATGACT
TACTCACCCGACGCTGAGGATCCCAGCACCACCCTCAAGCCGCGTGGCCA
CGGCTTTTTCCCGCCTGGCAGTAAGGTGGGTTTCTATGTTGAGCGGAAAA
CGGGCATGCGTATTTCTGATGAAATGCAGCATCAACTCATGGCCAACGAG
AAGAAGGAACGCCGCAACCCCTTCTACGCCCCTCCTACAACCCCTTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCAATCGTCACCCTAAGTCTTGTCCCTCCTCCGACGACAGCTACC
ACAACGGCCAAACGAAAGCTGCCCTCCCCTTCCTCCCGTCCTTCCTCCCT
CCCTCCCCTTCCCATAAACAAGCACAAAAAGTCTCTTGCTCCTCCTGCCC
TTCTCTCGCTCCTCCCAGTGAGAACGAAAGCTTCTCACCCTCCCTCCTTC
CCGTCCTCCTTTCCTCCCGTCCGTGgtaggggaaagacttcgaaaaagca
cgctgtaagtctctgcatccctccctccctccctctttccctcccttcct
cgttgctagCCCGAGACGAGGAAGGAAGAGTGATGAGGCGTTCGGGAAGA
CAGGTGGGGAAAGTGCTGATGGAGGAGGGGAGGGAAGGGGAAAGGGAAGG
AAGGAAGGGGAAGAGAGGAAGATATGCGGAGATGGATAGTGAGGAGGAAG
AGGAGGAGGAGGAGGAAGAGGAGGAGAAGATGGGTAGCAGGAAGAGGAAG
GGGAAAAAGGAGAAAAACAAGGCGAGGAGGGGAAACATTGAGCGAAGAAG
GTTGGTCGGGGAGAAAAAAAAAGATCTAGAAATATGGTGTTTCAATGACA
AGGACCGGGAAGAAGAGGAGAGGACAACGCAGGGCGAGGACGAGGAGGAG
GAAGGGAAGGAGGAGGAGGAGGAGGAGGAGGAGTTTCCATTGCTGTACGA
ATACCTGAGTCATAAGCGCCAGAGGCTCTTGAAGgtaaggcgggagggag
ggagggagggagggaggggagtatggatggaatacaggttgatgttgaca
cactcctttcccttccccctctcctccctttcctctctctcgctccctcc
cttcatccctccctcagTGGATGCCCTACTTCGTCTACCCCCGTCCCCCT
GCTCCCCCTCCCCCTCCATCTCTTCCCAAGCCAACAACATCATCATCATC
AGCAGCAGCAGCAGCAGCCGCGCATGCAGACGGAGGGAGGGGTGGACGGC
TCGAACGACGCAATCGCCGCCTCCGTCAGAAATCGGGAGAGGGAGGGAGG
GAGGAAGGGATGGTGACGATTGTACAGCAACAGCAGCAGGAGCAAATGCT
ACGGCAGCAGGAGGAGGAGCAGCAGGAGCAGGAGAAGCAGAAGCAGGAGC
AGCAACAGCAGCAGCGGGAACCGGAGCCGCAGAGGCATGGATGGAGGAAG
GGGGAGGAGgtgctcgtgtttttccgtaatatggacgacgggcgagaact
gagtgtggatgcatactggagggcgagggagggagggagagaggggggag
gaagAGGTGGGTGGAGGAGGTGGAAGAGGAGAAGGGGGAAGGGGGGGAGG
AGGAGTGGGGGGAGGGGGAGGGGGAGGATGACGAGGAGAGTGTCCTGACT
GTCAGCAGTATAGGGGAGGAAGGGGAGGAGGGAACGGAAGTGCAACAGCA
GCATGTTGGGAAGGGAGGGAGTGAGGGAGGGAAGAAAGAGGCGGAGGATG
ACAAGGAGAAGGAGGCAAAGCACCTGGTTGAGCAGGAAGAGGGCCAGCAT
CAAGTGCGGGAGCAGCAGCATTTTGAGGGGGGAGGAGGGAAGGGAGGAGA
TGAGGAGACGAAAAACAATAAGGAGGAAGGAAGACAACATCAAGTGCAGG
AGGAGGAAGAGGGCGGGGGAAGGGAGAGGGAGGGACCAGGAGGACGGCAG
GCGGAATCGAAGGACGGAGAATCAGAGGAGGGGAAAGAGGAAGAGGAAGA
GCAAACTAGGAAGTGCGAGGACGAGGATAGGGTGGATACGGTCTTTCTCG
AAGCTATGTCAGGCAAGGAGAAAGGAGGAGAGAAAGAGAGGGAAACGGAG
GAGGAGGGAGAGGGAGGGAGGGAGGATGGGAAGGAGAAAGAGGCGAGAGT
GGAGGAGGGGGGACAAGCGGAGGGGCTTAAGGATGAAATGGATGGCCTGG
CCGAGTTGTTGCAAGCAGGAACACTGATGGATGTGGACGAGGGAGGAGAG
GAGGAGATGGTCGAGGGGGAGGAGGGGGTTGAAGCCATGCTGCATGATGA
TGGGGCCTTTGCGTTCAGGACATGA
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protein sequence of NO22G00150.1

>NO22G00150.1-protein ID=NO22G00150.1-protein|Name=NO22G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=762bp
MCALSSTGAINAHLPLYFFNLLNPSLRLPCRPFSSLPPPQPHTDTDASLA
LTILHPLPQIMPSFSPITFVDLPKYGISYETKSQKRYVAMTYSPDAEDPS
TTLKPRGHGFFPPGSKVGFYVERKTGMRISDEMQHQLMANEKKERRNPFY
APPTTPSSSSSSSSSSSSSSSSSSSSSIVTLSLVPPPTTATTTAKRKLPS
PSSRPSSLPPLPINKHKKSLAPPALLSLLPVRTKASHPPSFPSSFPPVRA
RDEEGRVMRRSGRQVGKVLMEEGREGEREGRKGKRGRYAEMDSEEEEEEE
EEEEEKMGSRKRKGKKEKNKARRGNIERRRLVGEKKKDLEIWCFNDKDRE
EEERTTQGEDEEEEGKEEEEEEEEFPLLYEYLSHKRQRLLKWMPYFVYPR
PPAPPPPPSLPKPTTSSSSAAAAAAAHADGGRGGRLERRNRRLRQKSGEG
GREEGMVTIVQQQQQEQMLRQQEEEQQEQEKQKQEQQQQQREPEPQRHGW
RKGEERWVEEVEEEKGEGGEEEWGEGEGEDDEESVLTVSSIGEEGEEGTE
VQQQHVGKGGSEGGKKEAEDDKEKEAKHLVEQEEGQHQVREQQHFEGGGG
KGGDEETKNNKEEGRQHQVQEEEEGGGREREGPGGRQAESKDGESEEGKE
EEEEQTRKCEDEDRVDTVFLEAMSGKEKGGEKERETEEEGEGGREDGKEK
EARVEEGGQAEGLKDEMDGLAELLQAGTLMDVDEGGEEEMVEGEEGVEAM
LHDDGAFAFRT*
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Synonyms
Publications