NO21G02650, NO21G02650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G02650 vs. NCBI_GenBank
Match: XP_024572582.1 (Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Plasmopara halstedii] >CEG36213.1 Nucleotide excision repair factor NEF2, RAD4/CUT5 component [Plasmopara halstedii]) HSP 1 Score: 86.7 bits (213), Expect = 5.300e-13 Identity = 61/155 (39.35%), Postives = 74/155 (47.74%), Query Frame = 0 Query: 852 ARLVSMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGGRLAP 1006 A L S+I LGG V D GR FD CTHII +LKRT K + G A+ KWIL PSY+EA F+ E YEWG+ S +WP ACA R+ GG AG W K +PP + +ILAG G + P Sbjct: 798 ANLTSIITSLGGSVSDF-GR-----IFDSSCTHIICSELKRTEKFVAGCAAGKWILKPSYLEACSLAKSFIDESAYEWGSHESDIENVDTR---------IWPEACAYWRKKRAGG---HAGAFYRWRFFIHAKCVPPQDMCERIILAGRGAVIP 934
BLAST of NO21G02650 vs. NCBI_GenBank
Match: XP_002906661.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66062.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 85.5 bits (210), Expect = 1.200e-12 Identity = 56/151 (37.09%), Postives = 74/151 (49.01%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGGRLAP 1006 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+EA A+ FL E +EWG+ + G +WP CA R+ GG AG W K +PP + ++LAGGG + P Sbjct: 733 SIISSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLEACSASKQFLDESAHEWGSHKTDKKDID---------GRIWPEVCAFWRKERAGG---HAGAFHGWRFFIHAKCVPPRDMCERIVLAGGGSVIP 865
BLAST of NO21G02650 vs. NCBI_GenBank
Match: XP_009515724.1 (hypothetical protein PHYSODRAFT_475693 [Phytophthora sojae] >EGZ28449.1 hypothetical protein PHYSODRAFT_475693 [Phytophthora sojae]) HSP 1 Score: 83.2 bits (204), Expect = 5.900e-12 Identity = 57/150 (38.00%), Postives = 70/150 (46.67%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIWLVGGKKLIPPLPFVKTLILAGGGRLAP 1006 S+I LGG V GR FD CTHII +LKRT K + G A+ KWIL PSY+EA A G F+ E +EWG+ S SA W ARG G G + F K IPP + ++LAG G + P Sbjct: 742 SIISSLGGTV-SKFGR-----VFDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLEACSAAGKFIDEAAHEWGSHKSDKKDIDERIWPEVSA--YWRKERARGNPGAFAGWKFFI---------HAKCIPPRDMCERIVLAGDGSVIP 874
BLAST of NO21G02650 vs. NCBI_GenBank
Match: OWZ24167.1 (hypothetical protein PHMEG_000818 [Phytophthora megakarya]) HSP 1 Score: 82.0 bits (201), Expect = 1.300e-11 Identity = 56/148 (37.84%), Postives = 73/148 (49.32%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGG-GRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V D GR FD CTHII +LKRT K + G A+ KWIL PSY++A A G F+ E +EWG+ S +WP C+ R+ GG FAG W K +PP + +++AGGG Sbjct: 726 SIITSLGGSVSDF-GR-----VFDENCTHIICSELKRTEKFIAGCAAGKWILKPSYLDACSAAGKFVDETAHEWGSHKSDNKEIDDR---------IWPAVCSYWRKERTGGHSGAFAG----WRFFIHAKCVPPRDMCERIVVAGGG 854
BLAST of NO21G02650 vs. NCBI_GenBank
Match: XP_008907374.1 (hypothetical protein PPTG_13445 [Phytophthora parasitica INRA-310] >ETN06998.1 hypothetical protein PPTG_13445 [Phytophthora parasitica INRA-310]) HSP 1 Score: 81.6 bits (200), Expect = 1.700e-11 Identity = 54/147 (36.73%), Postives = 68/147 (46.26%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+E G FL E +EWGT S +WP CA R+ GG G W K +PP + ++LAGGG Sbjct: 462 SIITSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLETCSTAGKFLEEAAHEWGTHKSDKKDIDAR---------IWPEVCAYWRKERAGG---HPGAFNGWRFFIHAKCVPPRDMCERIVLAGGG 590
BLAST of NO21G02650 vs. NCBI_GenBank
Match: ETP41628.1 (hypothetical protein F442_11252 [Phytophthora parasitica P10297]) HSP 1 Score: 81.6 bits (200), Expect = 1.700e-11 Identity = 54/147 (36.73%), Postives = 68/147 (46.26%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+E G FL E +EWGT S +WP CA R+ GG G W K +PP + ++LAGGG Sbjct: 763 SIITSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLETCSTAGKFLEEAAHEWGTHKSDKKDIDAR---------IWPEVCAYWRKERAGG---HPGAFNGWRFFIHAKCVPPRDMCERIVLAGGG 891
BLAST of NO21G02650 vs. NCBI_GenBank
Match: KUF64892.1 (BRCT domain-containing protein [Phytophthora nicotianae]) HSP 1 Score: 81.6 bits (200), Expect = 1.700e-11 Identity = 54/147 (36.73%), Postives = 68/147 (46.26%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+E G FL E +EWGT S +WP CA R+ GG G W K +PP + ++LAGGG Sbjct: 708 SIITSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLETCSTAGKFLEEAAHEWGTHKSDKKDIDAR---------IWPEVCAYWRKERAGG---HPGAFNGWRFFIHAKCVPPRDMCERIVLAGGG 836
BLAST of NO21G02650 vs. NCBI_GenBank
Match: ETI43754.1 (hypothetical protein F443_11367 [Phytophthora parasitica P1569]) HSP 1 Score: 81.3 bits (199), Expect = 2.200e-11 Identity = 54/147 (36.73%), Postives = 68/147 (46.26%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+E G FL E +EWGT S +WP CA R+ GG G W K +PP + ++LAGGG Sbjct: 763 SIITSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLETCSTAGKFLEEDAHEWGTHKSDKKDIDAR---------IWPEVCAYWRKERAGG---HPGAFNGWRFFIHAKCVPPRDMCERIVLAGGG 891
BLAST of NO21G02650 vs. NCBI_GenBank
Match: ETK83820.1 (hypothetical protein L915_11058 [Phytophthora parasitica] >ETL37235.1 hypothetical protein L916_10956 [Phytophthora parasitica]) HSP 1 Score: 81.3 bits (199), Expect = 2.200e-11 Identity = 54/147 (36.73%), Postives = 68/147 (46.26%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+E G FL E +EWGT S +WP CA R+ GG G W K +PP + ++LAGGG Sbjct: 763 SIITSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLETCSTAGKFLEEDAHEWGTHKSDKKDIDAR---------IWPEVCAYWRKERAGG---HPGAFNGWRFFIHAKCVPPRDMCERIVLAGGG 891
BLAST of NO21G02650 vs. NCBI_GenBank
Match: ETL90374.1 (hypothetical protein L917_10864 [Phytophthora parasitica]) HSP 1 Score: 81.3 bits (199), Expect = 2.200e-11 Identity = 54/147 (36.73%), Postives = 68/147 (46.26%), Query Frame = 0 Query: 856 SMIERLGGEVLDMAGRGNKDSFFDGRCTHIILFQLKRTLKLLCGLASAKWILTPSYVEASHATGHFLPEGPYEWGTPPSXXXXXXXXXXXXXSAGVVWPGACARGREGGRGGGRVFAGLPPIW-LVGGKKLIPPLPFVKTLILAGGG 1002 S+I LGG V + + FD CTHII +LKRT K + G A+ KWIL PSY+E G FL E +EWGT S +WP CA R+ GG G W K +PP + ++LAGGG Sbjct: 462 SIITSLGGSVSEFSRE------FDSNCTHIICSELKRTEKFIAGCAAGKWILKPSYLETCSTAGKFLEEDAHEWGTHKSDKKDIDAR---------IWPEVCAYWRKERAGG---HPGAFNGWRFFIHAKCVPPRDMCERIVLAGGG 590 The following BLAST results are available for this feature:
BLAST of NO21G02650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G02650 ID=NO21G02650|Name=NO21G02650|organism=Nannochloropsis oceanica|type=gene|length=4657bpback to top protein sequence of NO21G02650.1 >NO21G02650.1-protein ID=NO21G02650.1-protein|Name=NO21G02650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1156bpback to top Synonyms
Publications
|