NO21G02460, NO21G02460 (gene) Nannochloropsis oceanica

Overview
NameNO21G02460
Unique NameNO21G02460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2483
Alignment locationchr21:745388..747870 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:745388..747870 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR031ncniR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02460.1NO21G02460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100714g1gene1156Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02460.1NO21G02460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02460 ID=NO21G02460|Name=NO21G02460|organism=Nannochloropsis oceanica|type=gene|length=2483bp
AGTCAGATGGGAAGATACGCGGGGCAAGCACAGTAACTTGTCAGACATGA
GAAGAATGTGTTGTTGGCTGCTTGCGGCAGAGTCAACGACGGGATAATTT
TAGCCCCCTCTCCCTGCCTTCCTCGTGGGCCTAGCGGCTTCTGACGACGT
TGACCTACTGCGGTGCCCAAAAAGCGTGGAAGGAGGCCGAAGAAATGGAT
CATAACAGGGCGAGCAGGAAGGGGGGAAGAAGGAGGGCTAGAATACCAGG
CCGCAGgtacgactcgtctgtttcctcttgcgactgcgacttcctcgtgt
cattgattcctacggcttcaaatttacactccacgcccaccattggaacc
aacaaacactgcacacgatagGCGTCATCTCTTCCCAACGTCCTCCTTCC
TCTCCCCGCTGTCCCGTTTCCACATACTGCAGCTACTGCTGCTGTTACTG
CTGCCAAGCACACACGCCTTCCGCATCTTTCCTCCCACTCCCACCTCGTC
AACCACTCGACCTCACCGCAACGTCATTGCGAACGCTGGAGGTGATGGCG
AACGAAGGGAAGGAGAAGAAAAAATTGTCGGTAATCAAAATGCCCAGGAA
TGGCTGCGGAAAGCACGTCTGGAAGGAGGAAGTATCAACCGTCGTTCCTC
CTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTTCCCTCGGCCCGTCT
CTCGCTCCTCTCCCTCCTTTCCTCCCTTACCCATGCGGGATGCGACCGGT
GTTTCCGCTACCAGTGCTGGAGTAGGGGATGGGAAAGGCAAGAAgtacgt
aggaagagggagggagggagggagggctggtggtgacatcacacgcagag
gcgaagcagcaaagcagccttacagtctcccctgtcgtttacctcattac
ctccgtatcaacatgacaccaacgttaaagcgcacatacctcacataaca
cacactcgtatgtatgtctataaacatatacacatgcctacctacctgcc
cccctatccccagCCCCAGAGGGACAACGCCTGTCGGGAACCATGACAAG
GAAATGCTCGAACGCCTGCGGCAAAGAAGgtgcgtgctcactctccctcc
ctccctctcttcccctcccctttcttccttccctccatcccttcatccct
ccctccttcccttctccttttctttccccgtcctcctttcctcccccccc
tctccttctctcccttcctccctccctgcctgtctccctcccgctgatcg
accatcctcctcatctcatccacacacagAGAGCTTCCTCCTCCTCCTCC
TCCTCCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCT
CGAGAGGATCAATGCCCAAGCGCCGCTTGCGCCGCCGAAAAGAACCTCCA
ACAACCGCTGCAGCAGCAGCTAAGGACAGTGAGAAGAAGAAGAAGGAGGA
GGAGGAGGAGGAGGAGGAGGAAGGGAGGGAGGGGGGAGGAGGGGTGCGTC
CACCAGTGGCAAAGAAGGGCATGTGGGTGGACGAAGCGGGCGCTGCGAGG
GTAGGGACCCGAGCTCTGCAAGAGGGAGATTTTCTGATCCATGATGACTA
CGGgtagggagggagggagggacggagggcgagacggaagaaaagacaga
agcaatgaccaagctaacgatcgatcgtgtattctcccccttccccaccc
tccccctccccctctccctccctccctcctcagCTTCACCCGCTTCGAGC
GCTTGGTCTGGGGCCGAGGGGTGGGAGGTAGAGGAGAAGCGAAGCGTCTG
GTGCGACTTGTCTTCGGGGGCACCCGGGGGGAGgtgagccgtcctccctc
cctctctccctccctccttgcccttctcctcccttgcctttccctctccc
tccctcccttcctagactcaggacatgcggatccctatctctctcctgtc
ttcctcaatccttttcacacccttccctccctccctccctccctccctcc
ctccctccctcgacgcagGGCAAGCGCGTGGATCTTTCCTCCCTCTCCTG
GCCCCTCCTGGCCTTCCACGCCCCCCGGGGCACCCACGGCGTCGTCCTCG
GACGGTACACCGACGCCGGCAAGCAGAAATGGAGTCAGAAGAAGgtgggc
acctcgtagcccttcctccctccctctctccctccttcgatgaaggctca
agtccaagcatcaaagagggacaatagcaacactcccaaccctccctccc
tccctccctccctccctccttagGAAAAGGCCCTCGTCCGGGCCGAGGAA
GCAGCAGCCGAGCTCGTCGCTCTCTATGCAGAGCGAGAAGCATACACCCG
CCCTCCCTGCGTCCCGGACGACACCCTCCCCCCTCCTCTTCCTCCCCCCC
TCCCTCCTCCTCTCCCCCTGCCTCGTCACCCCCACCACCCCATTCGCTGG
CGGAGATGGAGGCGTCCTTTGGCTTCACGTTGA
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protein sequence of NO21G02460.1

>NO21G02460.1-protein ID=NO21G02460.1-protein|Name=NO21G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bp
MDHNRASRKGGRRRARIPGRRRHLFPTSSFLSPLSRFHILQLLLLLLLPS
THAFRIFPPTPTSSTTRPHRNVIANAGGDGERREGEEKIVGNQNAQEWLR
KARLEGGSINRRSSFSSSSSSSSSSFPRPVSRSSPSFPPLPMRDATGVSA
TSAGVGDGKGKNPRGTTPVGNHDKEMLERLRQRRELPPPPPPPSSSSSSS
SSSSSSFSRGSMPKRRLRRRKEPPTTAAAAAKDSEKKKKEEEEEEEEEGR
EGGGGVRPPVAKKGMWVDEAGAARVGTRALQEGDFLIHDDYGFTRFERLV
WGRGVGGRGEAKRLVRLVFGGTRGEGKRVDLSSLSWPLLAFHAPRGTHGV
VLGRYTDAGKQKWSQKKEKALVRAEEAAAELVALYAEREAYTRPPCVPDD
TLPPPLPPPLPPPLPLPRHPHHPIRWRRWRRPLASR*
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Synonyms
Publications