NO21G02450, NO21G02450 (gene) Nannochloropsis oceanica

Overview
NameNO21G02450
Unique NameNO21G02450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5106
Alignment locationchr21:740220..745325 -

Link to JBrowse

Properties
Property NameValue
DescriptionTranscription-repair coupling factor (Superfamily II helicase)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:740220..745325 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of NO21G02450 vs. NCBI_GenBank
Match: EWM29482.1 (transcription-repair coupling factor [Nannochloropsis gaditana])

HSP 1 Score: 677.6 bits (1747), Expect = 4.100e-191
Identity = 382/531 (71.94%), Postives = 425/531 (80.04%), Query Frame = 0
Query:  142 MALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPT-EDSRPRLILVTRNLLSFHWDALSSALPSSLSPSR-----HPSQR---XXXXXXXXXXXXXXXXXXXXXXXGKEGVDKVKKRGCIIMELRDETLAAETALSVFVPLAEVILDQRRGLAERIGQGR 664
            MALSGMR+VSHIDTAPSSRKPV THI AW P  VE ALR ELA GGQAFYVVPRIRDIPHHV+ML DLLKGARKDGKDA I VAHGALPAGEAEEVLVRFAMR+GDVLVATTLIENGLDVP+VNTVVVAQAHKLGLASLYQLRGRVGRS+KQAFA+FFHPR+V+GE     G+E   +EKG                         + +  SLSSDP LRKRQ+A LGG+ MT EAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYM+MLAEAL+KVRGTAIEPTP+T+INL DG    QVLS+SFLPS+FFPNE+TR AE+EEARLAP+F+ LR L KRWRVTYH S+  +P+PR+VR+FFIRLNLLLA R+LSGE L L+K +  + R RL+LVTRNLLSFHWDAL  ALP S   SR     HP+ R             XXXXXXXXXXXXX ++GV +  KRGCI+MELRD ++AAETAL+V  P AEVIL+QR  LAERIGQGR
Sbjct:    1 MALSGMRDVSHIDTAPSSRKPVETHITAWAPEAVETALREELAHGGQAFYVVPRIRDIPHHVEMLKDLLKGARKDGKDAAIAVAHGALPAGEAEEVLVRFAMRQGDVLVATTLIENGLDVPSVNTVVVAQAHKLGLASLYQLRGRVGRSEKQAFAFFFHPRSVQGE-----GKEAGKQEKG----------------------GKGDQVKASLSSDPALRKRQLAQLGGKSMTQEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMNMLAEALVKVRGTAIEPTPYTEINLGDGLSNEQVLSSSFLPSAFFPNEKTRTAEIEEARLAPSFEKLRSLQKRWRVTYHCST--SPMPRSVRLFFIRLNLLLASRVLSGENLVLLKSSAAEGRARLVLVTRNLLSFHWDALCGALPPSHFSSRPSARPHPNLRRNVYFREGSIENGXXXXXXXXXXXXXXRDGVPRKGKRGCIVMELRDASMAAETALAVLFPFAEVILNQRESLAERIGQGR 502          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_088428761.1 (transcription-repair coupling factor [Halomicronema hongdechloris] >ASC69097.1 Transcription-repair-coupling factor [Halomicronema hongdechloris C2206])

HSP 1 Score: 363.6 bits (932), Expect = 1.300e-96
Identity = 234/581 (40.28%), Postives = 313/581 (53.87%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPTEDSRPRLILVTRNLLSFHWDALSSALPSSLSP 580
            MDRLV GDVGFGKTEVA+RAI +AV  HRQ  LLAPTTIL  QHY  L  RF P+ + + ++    TA + K + ARL  G + VVVGT  + GK V+FK+LGL+VVDEEQR GV+QKEK+K L   VDVLTLSATPIPRTL MALSG+RE+S I T P SR+P+ TH+  +DP  V  A+R EL RGGQ FYVVPR+  I   ++ L   + GAR       + +AHG +P GE E  ++ F+  E D+LV TT+IE+GLD+P VNT++V  AH+ GL+ LYQLRGRVGR+  QA A+ F+PR                                                                    + +T +A +RL A++E++  LG G QLA  D+ IRG G +LG EQSG     +G+D+Y DML EA  ++RG  I     T ++L            +F+PS++ P  E +M+       A +   L  L          S  + P+P A       + +L   +I      A IKP  + +  +++ T  +    W  L   LPS L P
Sbjct:  633 MDRLVCGDVGFGKTEVALRAIFKAVTAHRQVALLAPTTILTQQHYHTLKERFAPYPIQVRLLNRFRTAEEKKAILARLATGELDVVVGTHQLLGKGVKFKDLGLLVVDEEQRFGVNQKEKIKTLKAQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLAPYDPEAVRAAIRQELDRGGQVFYVVPRVEGIEEILERLRQWVPGAR-------LTLAHGQMPEGELESTMLSFSNGEADILVCTTIIESGLDIPRVNTILVEDAHRFGLSQLYQLRGRVGRAGIQAHAWLFYPRQ-------------------------------------------------------------------QALTEKARRRLRAIQEFTQ-LGSGYQLALRDMEIRGVGNLLGAEQSGQM-DAIGFDLYTDMLEEAFAEIRGQEIPQVEDTQVDLP---------VTAFIPSNYIPELEQKMSAYRSLAAASSQVELTQL------VADLSDRYGPIPHATEQL---IRVLALKQIAKSLGFARIKP--EGKQHVVMET-PMEEPAWKRLQEGLPSHLRP 1116          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_016869204.1 (transcription-repair coupling factor [Fischerella muscicola] >PLZ93449.1 transcription-repair coupling factor [Fischerella muscicola CCMEE 5323])

HSP 1 Score: 355.9 bits (912), Expect = 2.800e-94
Identity = 215/525 (40.95%), Postives = 294/525 (56.00%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHS-SSPHTPLPRAVRM 523
            MDRLV GDVGFGKTEVA+RAI +AV   +Q  LLAPTTIL  QHY  L  RF P+ +NI ++    +  + +D++ RL  G + VVVGT  +  K+V FK+LG++VVDEEQR GV+QKEK+K L   VDVLTLSATPIPRTL M+LSG+RE+S I T P SR+P+ TH+   +P  V  A+R EL RGGQ FYVVPR+  I    D L  ++ GAR       I +AHG + AGE E +++ F+  E D+LV TT+IE+GLD+P VNT+++  AH+ GLA LYQLRGRVGR+  QA A+ F+P+                                                                    R ++  A QRL A++E++  LG G QLA  D+ IRG G +LG EQSG     +G+D+YM+ML EA+ ++RG  I     T I+L            +F+P+ + P+ + +M+       A + + L  +   W   Y +   P T L R + +
Sbjct:  662 MDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRSPQERRDIQKRLVSGELDVVVGTHQLLSKDVNFKDLGMLVVDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLAPMNPETVRSAIRQELDRGGQVFYVVPRVEGIEERTDELRQMIPGAR-------IAIAHGQMEAGELESIMLSFSSAEADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQ-------------------------------------------------------------------RTLSDAARQRLRAIQEFTQ-LGSGYQLAVRDMEIRGVGNLLGAEQSGQM-EAIGFDLYMEMLEEAIREIRGQEIPKVEDTQIDLN---------LTAFVPADYIPDIDQKMSAYRAVAAAKSKEELTQIAAEWSDRYGTIPKPATQLLRVMEL 1101          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_017309609.1 (transcription-repair coupling factor [Fischerella sp. PCC 9339])

HSP 1 Score: 355.9 bits (912), Expect = 2.800e-94
Identity = 214/509 (42.04%), Postives = 289/509 (56.78%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTY 508
            MDRLV GDVGFGKTEVA+RAI +AV   +Q  LLAPTTIL  QHY  L  RF P+ +NI ++    TA + +D++ RL  G + VVVGT  + GK+V FK+LG++VVDEEQR GV+QKEK+K L   VDVLTLSATPIPRTL M+LSG+RE+S I T P SR+P+ TH+   +P  V  A+R EL RGGQ FYVVPRI  I    D L +++ GAR       I +AHG + A E E +++ F+  E D+LV TT+IE+GLD+P VNT+++  AH+ GLA LYQLRGRVGR+  QA A+ F+P+                                                                    R ++  A QRL A++E++  LG G QLA  D+ IRG G +LG EQSG     +G+D+YM+ML EA+ ++RG  I     T I+L            +F+P+ + P+ + +M+       A + + L  +   W   Y
Sbjct:  719 MDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTAQERRDIQKRLASGELDVVVGTHQLLGKDVHFKDLGMLVVDEEQRFGVNQKEKIKTLKTLVDVLTLSATPIPRTLYMSLSGIREMSLIATPPPSRRPIKTHLAPINPETVRSAIRQELDRGGQVFYVVPRIEGIEETTDGLREMIPGAR-------IAIAHGQMEASELESIMLSFSNGEADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQ-------------------------------------------------------------------RTLSDAARQRLRAIQEFTQ-LGSGYQLAMRDMEIRGVGNLLGAEQSGQM-EAIGFDLYMEMLEEAIREIRGQEIPKVEDTQIDLN---------LTAFIPADYIPDIDQKMSAYRAVAAAKSKEELTQIAAEWSDRY 1142          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_039724684.1 (transcription-repair coupling factor [Lyngbya confervoides] >KIF20451.1 transcription-repair coupling factor [Aphanocapsa montana BDHKU210001] >KIF42333.1 transcription-repair coupling factor [Lyngbya confervoides BDU141951])

HSP 1 Score: 355.1 bits (910), Expect = 4.700e-94
Identity = 216/509 (42.44%), Postives = 290/509 (56.97%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHL----RDLHKRW 504
            MDRLV GDVGFGKTEVAVRAI +A+ +H+Q  +LAPTTIL  QHY  L  RF P+ + + ++    TA + KD+  RLK G + VVVGT  + GK+V+FK+LGL+VVDEEQR GV+QKEK+K+L   VDVLTLSATPIPRTL MALSG+RE+S I T P SR+P+ TH+  +DP  +  A R EL RGGQ FYVVPR+  I      L + + GAR       I +AHG +  GE E  ++ F+  E D+LV TT+IE+GLD+P VNT+++  AHK GL+ LYQLRGRVGRS  QA A+ F+PR                                                                    + +T +A QRL A++E++  LG G QLA  D+ IRG G +LG +QSG     VG+D+YMDML E + ++RG  I     T ++L            +F+P+ +  + E +M+       A + + L     DL+ R+
Sbjct:  657 MDRLVCGDVGFGKTEVAVRAIFKAINSHKQVAMLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTAQEKKDILQRLKTGELDVVVGTHQLLGKSVQFKDLGLMVVDEEQRFGVNQKEKIKSLKTEVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLSPYDPEAIRSAARQELDRGGQIFYVVPRVEGIEDVSARLREWIPGAR-------IMIAHGQMQEGELESTMLGFSSGEADILVCTTIIESGLDIPRVNTILIEDAHKFGLSQLYQLRGRVGRSGIQAHAWLFYPRQ-------------------------------------------------------------------QTLTPKARQRLRAIQEFAQ-LGSGYQLAMRDMEIRGVGNLLGVQQSGQM-DAVGFDLYMDMLEEEIAEIRGQEIPKVDDTQVDLK---------VTAFIPNDYIDDTEQKMSAYRALAAADSKRELAQVAADLNDRY 1080          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_014276400.1 (transcription-repair coupling factor [Arthrospira platensis] >BAI92237.1 transcriptional-repair coupling factor [Arthrospira platensis NIES-39])

HSP 1 Score: 354.4 bits (908), Expect = 8.000e-94
Identity = 227/581 (39.07%), Postives = 321/581 (55.25%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPTEDSRPRLILVTRNLLSFHWDALSSALPSSLSP 580
            MDRLV GDVGFGKTEVA+RAI +AV   +Q   LAPTTIL  QHY  L  RF P+ + I ++    +AS+ K ++ +L  G I ++VGT SV  K+++F++LGL+VVDEEQR GV+QKEK+KAL   VDVLTL+ATPIPRTL MALSG+RE+S I T P SR+P+ TH+   +   +  A+  EL RGGQ FYVVPRI  I      + +++  AR       + +AHG + AGE E +++ F+  E D+LV TT+IE+GLD+P VNT++V  AHK GL  LYQLRGRVGR+  QA A+ F+P  +KG+                                                             G   +T +AV+RL A+KE++  LG G QLA  DL IRGAG++LG +QSG   + +G+D+Y +ML EA+ +VRG  I     T ++L         +  +F+PS +  + + +M+           + L  + + W   Y   +   P  + +R+  ++       +I      A IKP +DS+  +IL T  +    W+ L   LP  L P
Sbjct:  640 MDRLVCGDVGFGKTEVAIRAIFKAVTGGKQVAFLAPTTILTQQHYHTLKERFAPYPIEIGLLNRFRSASEKKLIQQKLITGEIDIIVGTHSVLSKHIKFRDLGLLVVDEEQRFGVNQKEKIKALKTHVDVLTLTATPIPRTLYMALSGIREMSLITTPPPSRRPIKTHLGPLNQETIRAAICQELDRGGQVFYVVPRIEGIEEKSAAIREMVPSAR-------LAIAHGQMEAGELESIMLTFSAGEADILVCTTIIESGLDIPRVNTILVEDAHKFGLGQLYQLRGRVGRAGAQAHAWLFYP--IKGD-------------------------------------------------------------GQAALTEDAVKRLRAIKEFTQ-LGSGYQLAMRDLEIRGAGDILGAQQSGQM-NAIGFDLYTEMLQEAIQEVRGQEIPQVDDTQVDL---------ILTAFIPSDYITDLDQKMSAYRAVASCQDSEELSRIEEDWSDRY--GTIPAPAQQLLRVMELK-------QIAKKLGFARIKP-DDSKQNIILET-PMEEPAWNLLKQNLPEHLQP 1128          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_035738093.1 (transcription-repair coupling factor [Arthrospira platensis] >KDR54146.1 transcription-repair coupling factor [Arthrospira platensis str. Paraca] >AMW29786.1 transcription-repair coupling factor [Arthrospira platensis YZ])

HSP 1 Score: 354.4 bits (908), Expect = 8.000e-94
Identity = 227/581 (39.07%), Postives = 321/581 (55.25%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPTEDSRPRLILVTRNLLSFHWDALSSALPSSLSP 580
            MDRLV GDVGFGKTEVA+RAI +AV   +Q   LAPTTIL  QHY  L  RF P+ + I ++    +AS+ K ++ +L  G I ++VGT SV  K+++F++LGL+VVDEEQR GV+QKEK+KAL   VDVLTL+ATPIPRTL MALSG+RE+S I T P SR+P+ TH+   +   +  A+  EL RGGQ FYVVPRI  I      + +++  AR       + +AHG + AGE E +++ F+  E D+LV TT+IE+GLD+P VNT++V  AHK GL  LYQLRGRVGR+  QA A+ F+P  +KG+                                                             G   +T +AV+RL A+KE++  LG G QLA  DL IRGAG++LG +QSG   + +G+D+Y +ML EA+ +VRG  I     T ++L         +  +F+PS +  + + +M+           + L  + + W   Y   +   P  + +R+  ++       +I      A IKP +DS+  +IL T  +    W+ L   LP  L P
Sbjct:  640 MDRLVCGDVGFGKTEVAIRAIFKAVTGGKQVAFLAPTTILTQQHYHTLKERFAPYPIEIGLLNRFRSASEKKLIQQKLITGEIDIIVGTHSVLSKHIKFRDLGLLVVDEEQRFGVNQKEKIKALKTHVDVLTLTATPIPRTLYMALSGIREMSLITTPPPSRRPIKTHLGPLNQETIRAAICQELDRGGQVFYVVPRIEGIEEKSAAIREMVPSAR-------LAIAHGQMEAGELESIMLTFSAGEADILVCTTIIESGLDIPRVNTILVEDAHKFGLGQLYQLRGRVGRAGAQAHAWLFYP--IKGD-------------------------------------------------------------GQAALTEDAVKRLRAIKEFTQ-LGSGYQLAMRDLEIRGAGDILGAQQSGQM-NAIGFDLYTEMLQEAIQEVRGQEIPQVDDTQVDL---------ILTAFIPSDYITDLDQKMSAYRAVASCQDSEELSRIEEDWSDRY--GTIPAPAQQLLRVMELK-------QIAKKLGFARIKP-DDSKQNIILET-PMEEPAWNLLKQNLPEHLQP 1128          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_068515029.1 (transcription-repair coupling factor [Leptolyngbya sp. O-77] >BAU44754.1 Transcription-repair-coupling factor [Leptolyngbya sp. O-77])

HSP 1 Score: 354.4 bits (908), Expect = 8.000e-94
Identity = 227/581 (39.07%), Postives = 313/581 (53.87%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPTEDSRPRLILVTRNLLSFHWDALSSALPSSLSP 580
            MDRLV GDVGFGKTEVA+RA+ +A+   +Q  LLAPTTIL  QHY  L  RF P+ + + ++    T ++ +D+  RL  G + VVVGT  + GK V+FK+LGL+VVDEEQR GV+QKEK+K L   VDVLTLSATPIPRTL MALSG+RE+S I T P SR+P+ TH+  +DP  V  A+R EL RGGQ FYVVPR+  I      L +++ G R       + +AHG +  GE E  ++ F   E D+LV TT+IE+GLD+P VNT+++  A K GL+ LYQLRGRVGR+  QA A+ F+P+  +                                                                   +T  A QRL A++E++  LG G QLA  D+ IRG G +LG EQSG     +G+D+YM+ML EA+ ++RG  I     T I+L            +F+P+ + P+ + +M+       A T + L ++   W      S  + P+P A    F  + L    + L     + IKP  D +  ++L T  +    W+ L   LPS L P
Sbjct:  655 MDRLVCGDVGFGKTEVAIRAVFKAITAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTNAEKQDILKRLASGELDVVVGTHQLLGKGVQFKDLGLLVVDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLSPYDPEMVRTAIRQELDRGGQVFYVVPRVEGIEETAAKLREMVPGVR-------MAIAHGQMQEGELEATMLTFNNGEADILVCTTIIESGLDIPRVNTILIEDAQKFGLSQLYQLRGRVGRAGIQAHAWLFYPKQSQ-------------------------------------------------------------------LTETARQRLRAIQEFTQ-LGSGYQLAMRDMEIRGVGNLLGAEQSGQM-DAIGFDLYMEMLEEAIKEIRGQEIPQVDDTQIDLR---------LTAFIPADYIPDLDQKMSAYRAVAAAQTKQELTEIAVDW------SDRYGPIPPAALQLFRVVELKQIAKKLG---FSRIKP--DGKQHILLET-PMEEPAWNLLKDKLPSHLQP 1138          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_036001530.1 (transcription-repair coupling factor [[Leptolyngbya] sp. JSC-1])

HSP 1 Score: 353.6 bits (906), Expect = 1.400e-93
Identity = 215/514 (41.83%), Postives = 290/514 (56.42%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSP 513
            MDRLV GDVGFGKTEVA+RAI +AV   +Q  LLAPTTIL  QHY  L  RF P+ + + ++    TA + K+++ RL  G + VVVGT  + GK V+FK+LGL+VVDEEQR GV+QKEK+K+L   VDVLTLSATPIPRTL MALSG+RE+S I T P SR+P+ TH+  +DP  V  A+R EL RGGQ FYVVPR+  I      L +++ GAR       I +AHG +  GE E  ++ F+  E D+LV TT+IE+GLD+P VNT+++  A K GLA LYQLRGRVGR+  QA A+ F+P+  +                                                                   +T  A QRL A++E++  LG G QLA  D+ IRG G +LG EQSG     +G+D+YM+ML EA+ ++RG  I     T I+L            +F+P+ + P+ + +M+       A T + L ++   W   Y +  P
Sbjct:  648 MDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTAEERKEIQQRLATGELDVVVGTHQLLGKGVQFKDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLSPYDPEVVRTAIRQELDRGGQVFYVVPRVEGIEEVSARLREMIPGAR-------IEIAHGQMMEGELEATMLTFSNGEADILVCTTIIESGLDIPRVNTILIEDAQKFGLAQLYQLRGRVGRAGIQAHAWLFYPKQSQ-------------------------------------------------------------------LTDTARQRLRAIQEFTQ-LGSGYQLAVRDMEIRGVGNLLGAEQSGQM-DAIGFDLYMEMLEEAIKEIRGQEIPQVDDTQIDLN---------LTAFIPADYIPDLDQKMSAYRAVASAQTKRELAEIAADWNDRYGAMPP 1076          
BLAST of NO21G02450 vs. NCBI_GenBank
Match: WP_102150238.1 (transcription-repair coupling factor [Fischerella thermalis] >PMB52466.1 transcription-repair coupling factor [Fischerella thermalis CCMEE 5201])

HSP 1 Score: 353.6 bits (906), Expect = 1.400e-93
Identity = 222/579 (38.34%), Postives = 315/579 (54.40%), Query Frame = 0
Query:    1 MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCARF-PW-MNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNLGLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREVSHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIPHHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLVATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFHPRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDXXXXXXXTDNAEILSTSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKADLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFTDINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLHKRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPTEDSRPRLILVTRNLLSFHWDALSSALPSSL 578
            MDRLV GDVGFGKTEVA+RAI +AV   +Q  LLAPTTIL  QHY  L  RF P+ +NI ++    +  + +D++ RL  G + VVVGT  +  K+V FK+LG++VVDEEQR GV+QKEK+K L   VDVLTLSATPIPRTL M+LSG+RE+S I T P SR+P+ TH+   +P  V  A+R EL RGGQ FYVVPR+  I    D L +++ GA+       I +AHG + AGE E +++ F+  E D+LV TT+IE+GLD+P VNT+++  AH+ GLA LYQLRGRVGR+  QA A+ F+P+                                                                    R ++  A QRL A++E++  LG G QLA  D+ IRG G +LG EQSG     +G+D+YM+ML EA+ ++RG  I     T I+L            +F+P+ + P+ + +M+       A + + L  +   W   Y +     P P +  +  + L  L        + L   +   +++  ++L T  +    W+ L+  LP +L
Sbjct:  668 MDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRSPQERRDIQKRLTTGELDVVVGTHQLLSKDVNFKDLGMLVVDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLAPMNPETVRSAIRQELDRGGQVFYVVPRVEGIEERTDELREMIPGAK-------IAIAHGQMEAGELESIMLSFSSAEADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQ-------------------------------------------------------------------RTLSDAARQRLRAIQEFTQ-LGSGYQLAVRDMEIRGVGNLLGAEQSGQM-EAIGFDLYMEMLEEAIREIRGQEIPKVEDTQIDLN---------LTAFVPADYIPDIDQKMSAYRAVAAAKSQEELTQIAAEWSDRYGT----IPKPASQLLRVMELKQL-------AKKLGFSRIKPEAKQHVVLET-PMEEPAWNLLAGNLPENL 1149          
The following BLAST results are available for this feature:
BLAST of NO21G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29482.14.100e-19171.94transcription-repair coupling factor [Nannochlorop... [more]
WP_088428761.11.300e-9640.28transcription-repair coupling factor [Halomicronem... [more]
WP_016869204.12.800e-9440.95transcription-repair coupling factor [Fischerella ... [more]
WP_017309609.12.800e-9442.04transcription-repair coupling factor [Fischerella ... [more]
WP_039724684.14.700e-9442.44transcription-repair coupling factor [Lyngbya conf... [more]
WP_014276400.18.000e-9439.07transcription-repair coupling factor [Arthrospira ... [more]
WP_035738093.18.000e-9439.07transcription-repair coupling factor [Arthrospira ... [more]
WP_068515029.18.000e-9439.07transcription-repair coupling factor [Leptolyngbya... [more]
WP_036001530.11.400e-9341.83transcription-repair coupling factor [[Leptolyngby... [more]
WP_102150238.11.400e-9338.34transcription-repair coupling factor [Fischerella ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR031ncniR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007722NSK007722Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02450.1NO21G02450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100128g11gene1155Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02450.1NO21G02450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02450 ID=NO21G02450|Name=NO21G02450|organism=Nannochloropsis oceanica|type=gene|length=5106bp
ATGGATCGACTTGTTCTCGgtgcgttccctccctccctccctccctccct
ctccctttctcctttcttttccatcctcgacttgcgcctccttcccttcc
ttcctatctccttacgacgatctgtccactcatcataatgactccctccc
tccccccctcccccctccctccctccccccctcccccctccctccctccc
ttcctccctccctcccccctccctccctccctcccttcctccctccctcc
ccccctccctccccagGCGACGTGGGCTTCGGAAAGACCGAAGTGGCCGT
CCGCGCCATCCATCGCGCTGTCTGCAACCACCGCCAATGCGTCCTTTTGG
CGCCCACCACTATCCTCGCCGCCCAGCACTACGCCCGACTATGgtacgcc
ctccctccccgccctccctccctcccttcccatcatcgtctcccgcgcaa
caagcctgttgcatcgacaaccgaacatccacactcccacgaattaactc
ttcccttcccttcccttcccttcccttcccttcccttcccttccctcccg
ccctcccttcctccctccttccttccctccctcccttcctcctccctcag
TGCGAGGTTTCCGTGGATGAACATTGAGATGATGCGTGGGAGTGACACAG
CCTCCAAGGCCAAAGACGTAAGGGCGCGATTGAAGGAGGGGGTGATACAG
gtagggtggaagggagggagggaaggagggagggaaggagggaggaatgg
aaggagagggagaaaagtggcgcgaaataaattctgaccgcccccaaaat
aaatacacggccctccctccctccctccctccctccctccttcagGTGGT
GGTGGGCACCACGTCTGTCACCGGCAAAAATGTACGGTTTAAAAACCTTG
GCCTAGTGGTGGTGGATGAAGAGCAGCGCCTCGGCGTCTCGCAAAAAGAG
AAACTCAAGgtacgtctcgcccgccctccctccctcgctccctccttgac
ccctgtcaccttttcctccctcctcccttcctttccctccctccctccct
ccctccctccctccttcctatagGCGCTGGCCAAGGGCGTGGACGTCCTC
ACCCTCTCAGCCACGCCCATCCCCCGCACCCTCCAAATGGCTCTGTCAGg
tacagaatcctaggccctccctccctccctccctccctccctccctccct
cgtgaccaccaacattctgtcttcccctcccccttccccctccctcagGC
ATGCGTGAAGTCTCCCACATCGACACTGCACCCTCCAGCCGGAAGCCTGT
CTTTACCCACATCGAGGCCTGGGATCCGGCCAAAGTCGAACGCGCGCTCA
GGGCAGAGCTCGCCCGCGGTGGTCAGgtacaggtggattgcccctccttc
cctcccaccctccctccctccctccctccctccctccctccctcccttcc
tcccttcctccctctctcctgtcgcccttcctggtcatcgtctgatcagt
ttcgatgtaatgcacccttacttccctccctccctccctccctccctccc
tccctccctcccttcccagGCCTTCTACGTCGTGCCTCGCATTCGTGATA
TCCCCCACCACGTTGACATGCTCCACGACCTCCTCAAGGGAGCACGCAAA
Ggtccccttctccctccctccctccctccctccctccctccctccctccc
accctctttatgcttcctctgatgctcctctctccgcgcatgcccatctc
attacatttacgtctccctcgttttgtaatgatgattacgacgatgagta
tgagaatcgtgattaggatgatgactacgatgttgatgataattatcacc
atcattcaccggatagattcctctataagattatagatatttagaatcat
ggaccatcgtctcgcgcgtttatctcctcccttccactctctcggtccct
cccttcctccctgcttcctagACGGCAAAGACGCCACCATCTGTGTCGCC
CACGGTGCTCTTCCCGCCGGCGAGGCTGAAGAGGTCCTCGTCCGCTTTGC
CATGCGAGAGgtacgtcctccctccctccctccctccctccctccctccc
tccctccctccctccctccctccctccctccctctctccccacgtaatgt
gaggcccctccccccctccctccctccctccctccctccctccctccagG
GCGACGTCCTGGTCGCTACCACCCTCATTGAGAATGGCCTCGATGTGCCC
ACTGTCAACACCGTCGTTGTCGCGCAGgtagccccctttccctccctccc
tccctccctccctccgtccttcgctcccatcctccctccttccctccttc
cctgacaccgtagacaacccgaaagggagggagggaggggaggagggagg
gagggaaagacggatgaaatttacgtcagtctcacatacttgccttccct
ccctccctccctccctccctccttcagGCACACAAGCTCGGCCTCGCCTC
TCTCTACCAGCTGAGAGGGAGGGTGGGAAGGAGCGACAAGCAGGCATTTG
CCTACTTCTTTCACCCCCGCGCGGTGAAGGGAGAGGAGGGGGAGAAGGGA
GGGAGGGAGATAGCGGCGGAGGAGAAGGGGAGGGAGAGGAAAACGAGgtg
agtgtctgtgggagggaaggtaaagaggaaagaggagagagcttgaaaga
taaactcacacgcagacacacacactcctcaagtacgacaaaacattcac
tctctctcacgcacagaatcacacacaagtacgacaaacactcacacact
cacacactctctatctcccccccactagtacgacactcactttctcactc
tcatccacacacatgtacgacaaacactcacacactctctctctaacgca
cccacatagCGCCACACACACACAGTGGGACGACGAAGATGAGGAGGAGG
CCGAAACTGATAACGCCGAGATTCTCTCCACCAGgtccgtatgtgccccc
ccctccctcccaccctcccaccctccctcccttcccctctcctccttaac
cacattcctctccacctccttctcgcctctctcccttcctccctcagCCT
CTCCAGTGACCCATTCCTCCGCAAGCGTCAGATCGCCCTTCTCGGGGGTA
GGGTCATGACGTCCGAAGCCGTGCAGCGgtacgtccctccctccctccct
ttctcccaccctccctccctccctccctccctccctccctccctccttcc
ctccttccttccctccgcctcgctgccctccaggaatacagccatcttct
cgatatgcctcacctttcctcccactccccctccccccttccttccctcc
ctccctcccccagCCTCGCCGCCCTCAAGGAATACAGCCACCTTCTCGGC
ATGGGTCCACAGCTGGCCAAAGCCGATCTTGCCATTCGCGGGGCAGgtac
gatctccttctctccctccctcccttcctccctccccccctcccttcttt
ccctcctcctttccacctttccctccctccctccttccctccctttcccc
ctccttttcccccagGCGAAGTTCTTGGATATGAACAAAGCGGTGACAAA
GGCAGTGGTGTGGGCTATGACGTTTATATGGACATGCTGGCCGAGGCCCT
GCTGAAAGgtatggatgtgtctccctccctccctccgtccctccctccct
tcctccctcccttccttcctcatttcaattccactcactcatctccacac
atgcttttcctccctcccttcctccctcccttcctccctccctagTCCGG
GGAACGGCCATCGAGCCCACGCCATTCACCGACATAAACCTCATGGACGG
CCAGCCCACCAATCAAGgtgtgggagggagggagggaggagggaggaagg
gaaggatgcccctttggtgaaatgactgtaccaacacacccctccctccc
tccccccctccctcccttcagTCCTCTCCGCCTCCTTTCTCCCTTCCTCC
TTTTTCCCCAACGAGGAGACGCGGATGGCGGAGGTAGAAGAAGCGCGCTT
GGCGCCCACCTTCAAACATCTGAGGgtatgtttcctgccctccctccctc
ccatcctcccatccgccctccctctctccttccaccagccgtggagggtg
acgtgtcactcctcctctccctcattctctcatttattccttcctccctc
tccttccctccctctcccccctcttccctcagGACCTGCACAAGCGGTGG
AGGGTGACATATCACTCCTCCTCCCCCCATACGCCCCTCCCCCGTGCCGT
TCGCATGTTTTTCATTCGTTTAAATCTGTTGCTAGCCTGTCGTATCCTGA
GCGGTGAAACGCTCGCGCTGATCAAGCCGACAGgtcaggaggggagagag
ggagggagggagctttcgctttccctcatcattgtcagcacactccctgc
acatgcctctccgttcgtctttcccgcctctctgattttgccctcagcgt
tcacttgcgtcctgtctcccaactctgttactcacctccctcccttcctc
cctccctccttcccttcctccctcgcccccacagAGGACTCTCGTCCTCG
CCTCATCCTCGTCACGCGCAATCTCCTCTCCTTTCACTGGGATGCCCTCT
CCTCCGCCCTCCCTTCCTCCCTCTCCCCCTCCCGCCATCCCTCCCAGCGG
CGACACGCCAACCTTCGACGGGATGTTTATTTTCGGGAGGGAGTGATGGA
ACGGGAAGAGGAGGAGGAAGGGAAAGAAGGGGTGGACAAGGTCAAGAAGC
GAGGGTGCATCATTATGGAGCTCCGGGACGAGACGCTGGCGGCTGAAACG
GCATTGAGCGTTTTCGTGCCCTTAGCAGAGgtacgagggtccttccttcc
ccccctccctcgctccctccctccttccaaattctcgacctttaccgcct
ccacctatttctgatttttcacctatttctttcgtttcttcccgctagGT
CATTCTTGATCAACGACGAGGTCTTGCAGAGCGAATAGGACAAGGGAGGA
AAGGCCAGGCAGCAAAAGCAGGGGGAGGAGGAGAGGGAGGGAGGGGAGGG
CGGTGA
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protein sequence of NO21G02450.1

>NO21G02450.1-protein ID=NO21G02450.1-protein|Name=NO21G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp
MDRLVLGDVGFGKTEVAVRAIHRAVCNHRQCVLLAPTTILAAQHYARLCA
RFPWMNIEMMRGSDTASKAKDVRARLKEGVIQVVVGTTSVTGKNVRFKNL
GLVVVDEEQRLGVSQKEKLKALAKGVDVLTLSATPIPRTLQMALSGMREV
SHIDTAPSSRKPVFTHIEAWDPAKVERALRAELARGGQAFYVVPRIRDIP
HHVDMLHDLLKGARKDGKDATICVAHGALPAGEAEEVLVRFAMREGDVLV
ATTLIENGLDVPTVNTVVVAQAHKLGLASLYQLRGRVGRSDKQAFAYFFH
PRAVKGEEGEKGGREIAAEEKGRERKTSATHTQWDDEDEEEAETDNAEIL
STSLSSDPFLRKRQIALLGGRVMTSEAVQRLAALKEYSHLLGMGPQLAKA
DLAIRGAGEVLGYEQSGDKGSGVGYDVYMDMLAEALLKVRGTAIEPTPFT
DINLMDGQPTNQVLSASFLPSSFFPNEETRMAEVEEARLAPTFKHLRDLH
KRWRVTYHSSSPHTPLPRAVRMFFIRLNLLLACRILSGETLALIKPTEDS
RPRLILVTRNLLSFHWDALSSALPSSLSPSRHPSQRRHANLRRDVYFREG
VMEREEEEEGKEGVDKVKKRGCIIMELRDETLAAETALSVFVPLAEVILD
QRRGLAERIGQGRKGQAAKAGGGGEGGRGGR*
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Synonyms
Publications