NO21G02430, NO21G02430 (gene) Nannochloropsis oceanica

Overview
NameNO21G02430
Unique NameNO21G02430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4192
Alignment locationchr21:735661..739852 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:735661..739852 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR031ncniR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007721NSK007721Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02430.2NO21G02430.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO21G02430.1NO21G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675399gene_12117Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02430.2NO21G02430.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO21G02430.1NO21G02430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02430 ID=NO21G02430|Name=NO21G02430|organism=Nannochloropsis oceanica|type=gene|length=4192bp
TGTTGCCGTGCAGCAGGCAGCTCGATTAGTATTTTTACGGTCCGTTGCAT
GATGGACACACGCTAATCTGTTTGTAGTTGGTCTAGCTCGTGAATTGATT
ATTTTACATTGTTTTTGGTCGCGAATTGTGTGTGCGTCGCACGCCTTTCC
TTCCCGACCCAAATCTCACGTCACTCCACTGCACACAGAGACACACCATC
TTCCACCGTCCAGCACTTTGTTTGCAGCAGCAATACCATGCCTAACACCT
CTAATGAAAGTGGCTCGAATGCCTTAAACAAGAAGCAGCTCCTTCTCATC
GTCCTGGGCGGAGCCGTGGGTCTCTTCGCCCTCACCACCACCACAACGCC
TCTCTTATCCACGCCTTCATCGCCCTGGGTCAACCGTTCCCTGCGCCGCC
GCCAGCTTAGCCATGCTGGGGTAGGTCTCAATTTTATTATGTGAAATAAT
GGTACTATCTCCCTCTGCTTAATTGCAGCGCAGTCCTCCTCACCAATTCT
CCACGCCTTCCCTCCCCTACCCCATCCCAACATTCATGAAACAGCCCCTG
GAGCGCGTAGGCAAGGCCCTCGATCACGCACTGAAACCACGATTTGGCAA
ACATAAGGGTAAGGACATCGGCGGCAACTGGGTGCACAAGGCCGTGGGCG
ACAGCGAAGGTCTTAGCCGGCCGGACCTGGGCATGATGCTGGCTGGCGAG
AATCCTGCTGAGCCGAATCAGGCAAACGACTCGGTACTGCATTTGGGTGG
AGGACTTCGCAATGACCCGATTGTCAAGGCCGTTCAGgtacagttggaag
aagatcatgtaccggtgggcctgtcgtgtatcctgtcgtgcactgggttg
accgtttgccctgttaaaggtcacctttccttctctacacgatactaaac
ggacacacaactcaaaattcgtgaaatacactcttcatagGATCGTCATA
ATCCGCACTCTTCCCGTCAGCTAGAGTATATTAAGGCCCTCCCTCCCACA
TTTAGTGCCACGCCTGCTACGCCCAATCAGATGGTTCCCGTCGACCAAGT
AAACGGCAACGGCGGTGCCAAGGACAACAACAAGGCCAAGAGCGTCAAGG
TGCCTGGGCATGACAAGAGTCACAAGAAAGTCCATGGGCACGAAGAAGAA
TTGGATCACCTCCACAAGCACGGACATGGCCAAAAGAAGAAGAAACACGT
CAATCCCCTGGTGGTGGCTCACCTGTACTCAAAGAAAAAGGCCCTGCAGG
CGGCTCACAAGATGGAGAAGGCTGTCCTCAAAGCCAAGGGTAAGAAGCTC
CACTACGAGCTCGAAAAGAAGAGCAAGGAGATGCACCGCGACATTGCCAA
GGCAGCCCACGGTCACGCTGCCCATATCAAGAAGACGAAGAAGCAGGCAG
AGGCCAAAGCCGCCCACGTTGCCCATGCTGCTCATGCTGTAGCCCATGCC
GTCCATGAGACCCACAATGTCGACCACCTCCACCGTGCTCTCCAACCGGG
GCAGAATCTATCCGAGGAGGATAAAGAGAAGCTTCGTATGATTGCTCGgt
aagttgcaagggcagaagggtagagagtaccgagtgggatgagaatctat
atgcatgcctgtctttgttatcacacgtgagtacacttaagctattttct
acgaattagTGAAGCTGCGCTCAAGGTCCTGAAGGATGCTGCCCAGGATG
CGGGATTCGACGCGGCACTGCTGGCCGAAGCCGAAGAGGAGGCTGAAGCT
GCGGCTGGTGCCAAGGCAGAGAACTATGAGGAAGAGGAGATCGAGGAGGC
CTTGGCGGACTTGCTGAATCTGGATGGCCTGCTTCTTTTGAGTAAGCCCG
CCATCTCTTTCCTTGACCGTGTTCAGGTGACAAATGATACAATTGCCAAT
ACATCGAAAGTTACCGACGCTACTACCTCTGACACGCCCTTGATCCAAGA
CATGCTTTTGGCCCTGCGCGACACGAATATGACGGCGACGGAGGCGGAGC
GCTTGCGGTCCGAGGCGCGAACGGCCGCCATACAAGCCATTCGGGATGTG
GCTCGGGAAGCCGGGATTGAGGATCGAATCCAAGACGATATGAGCCTCGA
GAATTTGTTCAAAAACATTGCTGCGGCTGCAAACTCGGGCGGGCCTGCCG
TGACTACTGGAGATGCCTCGGCGGCCACGCCGACGGGTAATCGTATGCTG
CACCATGAGTTGGATCACAAGGATAAAAATGATGGATATATGGGTGACCG
CCAGCTCGCAGGGCGATGGTCCTACGATGATGAGAAGACACAAGCTCCTG
AACACGGGTGGGACGAGGCGTACTTTCATGAGGGAAGGGCTGGCGGTCGC
CGCAGTTATGAAGACTACAACAAGCACGGCACGCACGGGAGCTTGGGCAA
GCACGGGTACTTGAGCGACAATGAAAGTAGTGATGAGCATGACCGACAAT
TGTGGAACTACTACAGCAGCGGGCGAAAGATGGGGGGCCGAGGGGAATCG
GACGAGGAGGATGAGGCATTCGGGGAGGATGATTTCTTTGCTGAAGCCCA
GCGGCGACACCATGGGAAGCAAGGACATCACTTTCATTGAGCAAAATAGG
TAAGCAACTGTATGACATCATATCCCTCCTTTGTCTCATGTATATCGTAA
GTGAATAGGCCGAGCAAGATAATTTCGAAGTAGCTCTGCTGCCGTTTGCA
AATGGCCCTCTATATCCCGCCATCATCGCCATATCATCGTCATCTTGTCA
GTGTCATACACCATTATAATTTGTCCTTGAGACGATGTATGCAAATTTGA
TCTGCTCTGATCTTTCATGCACCGGCGTGTGTGTGGATAAGGGAAGATTA
GATGCAAATCTACCAGAGAAGGAAGGTGAGGGGACAAGGAAAATCACAAG
GGAAAATTCAGTACGAAAGTGGAGACAAAGGTAAAAGAGAAACAAAAAAT
AAGACGTTTGATTTAGAATTTTCCTTACAGTTGGTAGAAACAGTTCCCTT
GCACCAACTCTTGTCCCAATTTTCGCTTATCCACATTCACGGCCCCATTT
TTTTTCATCTAAGTTGCTCAACTTGTCACAGCCCCATCCACATCCCTCTT
CACCTTCTCTTCGTCATTTACATTACTCTCCTTTGCCATTGTCGGTTTAA
GCCTTTCCCCCTCCTCTCTTCCCTCCTTTCTTCCTCCATGTTCGAATCGA
TCTACGGCCTCCTCTAACGCCACGGCCAGACGAGTGAGGGCGTCCATCCA
CGTGCTCGGCCTGTCCTCCAAGCGACGAAAAAATCCACGGAGACCACGTC
GATGAAGGGGATCAGATAAATCGTTGGTGTTGCTGGTTTTGTTGACGGTA
TTATCAGAGGAAACGGCAGGAGCGGTGGCATTGACAGCGATTTGAGCTGG
TGAGGCCGCTACCATAGTTGCCGTCGCATCTCCAACTGCTGCTGCCGCTG
CGATGATTCCTGTGAAAATGTCACCTGTGGTAGCAGTCGTTCCTGCTGTC
ATCGCTGCCTTGCTTGATGATGCTGATGGCAACCCTTTCGCCACCCCGTC
CTCAGCAGAGAAAAAGGGGAGGATGGATTCGGTCTCGTAGCTCACAGGGT
TTTTCTGGACTGGCACAGCAGTGGGTGTAGCGGCTGAAGTGGCAGAAATC
TGCAAGGGATCGGTATTTTGGCCATGGAGAGGAACATAGTTGCTGCTGCT
GCTGCTGCTGCTGCTGCCGCTGCTGCTGCTACTGCGGCTCCTGTTGATAG
AATCATTAAAAACCATAACCACTACCGCCAAAACACCCAGCAAGAGAGCC
ATGGAAAGGATCAGGAGAAGAGCGGCACTTCGCTTGCTGTAGCCATCTGA
TTCAGAATTGTTAGTTATGCCAGATGCAGGGACAAAGGTTGTGATCGAGG
TCTGGGAAGCTTGATGATGGTAGGCAGGCGTCGACTTCTTCGTGCTGTGG
TGTTGCTGACGCTTCATCAAATTTCCCTCCACGATAAACACTATTTCTTC
GTCCTCCCCCTCGGTCTCTTCGCAGTATGTAGAGTTGGTATCCCCCTCGA
AATTTTCATCCTCGCCACTGCAGGCCGGTTGGTGGTGCGGGGGGAGCTGA
TACACGACTTCCTCCTGCGAGTGGGAGGCGTGCTGCAACGAGGCCGCCTC
GTCTGCCTCGTCTCGTGGCATTGCGCCAGGAGTCACTGTGTG
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protein sequence of NO21G02430.2

>NO21G02430.2-protein ID=NO21G02430.2-protein|Name=NO21G02430.2|organism=Nannochloropsis oceanica|type=polypeptide|length=597bp
MKQPLERVGKALDHALKPRFGKHKGKDIGGNWVHKAVGDSEGLSRPDLGM
MLAGENPAEPNQANDSVLHLGGGLRNDPIVKAVQDRHNPHSSRQLEYIKA
LPPTFSATPATPNQMVPVDQVNGNGGAKDNNKAKSVKVPGHDKSHKKVHG
HEEELDHLHKHGHGQKKKKHVNPLVVAHLYSKKKALQAAHKMEKAVLKAK
GKKLHYELEKKSKEMHRDIAKAAHGHAAHIKKTKKQAEAKAAHVAHAAHA
VAHAVHETHNVDHLHRALQPGQNLSEEDKEKLRMIAREAALKVLKDAAQD
AGFDAALLAEAEEEAEAAAGAKAENYEEEEIEEALADLLNLDGLLLLSKP
AISFLDRVQVTNDTIANTSKVTDATTSDTPLIQDMLLALRDTNMTATEAE
RLRSEARTAAIQAIRDVAREAGIEDRIQDDMSLENLFKNIAAAANSGGPA
VTTGDASAATPTGNRMLHHELDHKDKNDGYMGDRQLAGRWSYDDEKTQAP
EHGWDEAYFHEGRAGGRRSYEDYNKHGTHGSLGKHGYLSDNESSDEHDRQ
LWNYYSSGRKMGGRGESDEEDEAFGEDDFFAEAQRRHHGKQGHHFH*
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protein sequence of NO21G02430.1

>NO21G02430.1-protein ID=NO21G02430.1-protein|Name=NO21G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=655bp
MPNTSNESGSNALNKKQLLLIVLGGAVGLFALTTTTTPLLSTPSSPWVNR
SLRRRQLSHAGPLERVGKALDHALKPRFGKHKGKDIGGNWVHKAVGDSEG
LSRPDLGMMLAGENPAEPNQANDSVLHLGGGLRNDPIVKAVQDRHNPHSS
RQLEYIKALPPTFSATPATPNQMVPVDQVNGNGGAKDNNKAKSVKVPGHD
KSHKKVHGHEEELDHLHKHGHGQKKKKHVNPLVVAHLYSKKKALQAAHKM
EKAVLKAKGKKLHYELEKKSKEMHRDIAKAAHGHAAHIKKTKKQAEAKAA
HVAHAAHAVAHAVHETHNVDHLHRALQPGQNLSEEDKEKLRMIAREAALK
VLKDAAQDAGFDAALLAEAEEEAEAAAGAKAENYEEEEIEEALADLLNLD
GLLLLSKPAISFLDRVQVTNDTIANTSKVTDATTSDTPLIQDMLLALRDT
NMTATEAERLRSEARTAAIQAIRDVAREAGIEDRIQDDMSLENLFKNIAA
AANSGGPAVTTGDASAATPTGNRMLHHELDHKDKNDGYMGDRQLAGRWSY
DDEKTQAPEHGWDEAYFHEGRAGGRRSYEDYNKHGTHGSLGKHGYLSDNE
SSDEHDRQLWNYYSSGRKMGGRGESDEEDEAFGEDDFFAEAQRRHHGKQG
HHFH*
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Synonyms
Publications