NO21G02400, NO21G02400 (gene) Nannochloropsis oceanica

Overview
NameNO21G02400
Unique NameNO21G02400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3980
Alignment locationchr21:723285..727264 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:723285..727264 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR031ncniR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007716NSK007716Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02400.1NO21G02400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|675396gene_12113Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02400.1NO21G02400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02400 ID=NO21G02400|Name=NO21G02400|organism=Nannochloropsis oceanica|type=gene|length=3980bp
CTTCACACTCCTCCTCCCACCCTCTCCTTCCCTTAGCAAACCATGAAGTG
CCTGGTCCCGCTCCCCACCACCCTCCTAGTCCTGATGGTTCTCCACTCCA
GCATTATACCCTTTACCTATCGTTCTACTCCATCTCTCTTGTGCTGTGCA
GCTCATGTCATGGTCGGAGACGACAGCAGCCTGGTTGAGGTGAAGCGCCG
GTCTCTGTGGGAACTCTCCGTGGTCTGGGACAAGCTCGGACACTTTGTGG
CGCGGCTCTGGCACGGTCACCACGACGAGGACGAGGAGTGCGAAAAGATA
AGGCATCCACTATCAAAAACGATGTCCCTCTCCGCCAACGAGACGGCGAC
TACCCTGGTGACACAAAACGACTCGACACCCGTTACAACCCACCGCCACC
TACAAAAAGGGGTAGGGGAGCACAGCAAGGATACAGAGCTTCGGGCCTTG
AAAATGGTGCAGGTCTCACGGGCCCGGGACGTGACTAGCCATGAGCGCTT
GTGGGCGACGGTAATTGACGATGACAACATGGTGGACGAGAGGAAGAACG
ACGAAGACTACGTGCACCAGCAGACCACCACAGGCCCAAAACCCATTCTT
GTGGGGGATCTCGTGGAGCATTACTCTTCTCTCAGCGCGGTATTGCAAGA
CATACCCGACAATGAGGATCCGGACACCTATTCACTGAACATAAAGAACC
CCTACCAGGAGTCGACCCTGCCTGTGTCTGAGGCGCCTTTGTACCCGAAG
CCAGGAGACCACACGAGGTCGCCTTATCACCCGGAGTCAGCAGAACACAC
AAGAGATATTGAGAGGGACGACGATAATGGGAAGATTATCTATATGACAT
CATTCAAGACGGTGACGGGAGACGTGCCAACAGAACAAGTGGAGGAGTTT
TCCCAGGACGAACCCGAGAATTACGCCGACGATGTCATTGAGACCCACTT
TTCCTCGCCCCATCACCAACGCCAGCTATTTATGCACCCTGAAGACTTTA
AATTACATGCGCACAAGCATAACAACGACAAAAAAGACGAGAAAGTGGAC
CCTTACTACAGCAAGGACAATGGGCTATGGCGCCGCAAGTTCAAAGGACC
CAAGACACCGCAAGGCTTTCCTCTCCCTGACAGCACGAGCGAAGTGCGTC
ACCACCACATCCACCAACACCAGCGTCAGCTGCGAGAGCAAGCACGCGCC
AACATGTCCGAGACCGAGCTAGCACAAATCCAAGAGGAAGCGCGGGAAGA
GTTGGTGCAGGCTTTGCGCTCGGCGGCGCGCGACGCCGAAGCGCATCGCA
CAGACTTGTCGGTAGGGAACAGTTTGGAATCGGTTATGAAAGCATTGGCA
GTGCGTCGCCCTCCTGTGCCGGGCTTCACAATGGGCACTCCTATGGTGGA
GACACAGCCACAGAACACCAAGGAACGTGAACAAGTGCGCTTGCCCGGGG
ATGGCATGCAGCCCAAGGTGGATAACCCTCTACCTCCCGGGCGGAAGCAC
CGTCGACTACGAGGCTTGCAGCAAGCAGGAGCTGCATCTGGTACTGGCGT
GGGGGCGGCTTTGGCGGGCACTTTCACGGAGGCTCAGAAAGCGGAGTTGC
GGCAAATGTTTTATGATGCAGCGCTGAGCATGATGCGGGAGGCGGCCCGA
CAGGCTCTGAATACCAACCAGGGAGGAAGTAGTGGGGGTAGCAGCAACAG
CATGTTTCCGTCGGCTAATGGGAATAATGTAGGCAGCAACGTGGTCAATC
AAGATGCCTACACAGCGGCTCTGAACGCTATGATCAATGCGGTCGGCTCC
AAGGAAGTGAACAATGCTAACGGTGGCATTGCTTCGCACTCCGGTGGCCC
CGGCGGCAAAGTGGAAAGCAGTGGCAAAAATGGCGGTGGCAGCGGGGCTC
CCGCTAAAAAGCAAAGCCTCTTGGAAGTCGCCCGGGAGGTTGCTCGTCAC
AACAGTCCCTCGGCGGGTCGTCCTCCTATAGCTGCTGGGCGCCAACCAAA
TGGTCAGCGAAAGTTGCGGGGCTTAAAGACCACGGTCCGCCTCCCTGTGC
CTTATACACGTAACTCTTCATCGAATGATACCTTGATATCCATAATCCGT
AACGGGACTGATGCCATCTATGTGCCACTGCGACATGTGGATCCCTCCCT
CCAGGAGGAGGCCTTTGCGCGACTTGGTCCTTTGGGTCCTATTATCCAAG
GTGCAGCGGGGGCGATAGGTGGGGAGAGTGTCAAAGAGACTGAAGATGGG
AAGCGTTTCTATGGAGGGCAAGGTAGCGTCACTAATCCTTCGCATCCCAA
GGGCCATGAGTGGGCTGAGTGGCTTTTAGTCCTGGTCAAGAAGCACAAGG
CACATCAACACTGGCAGCAGGAAGAGCGTACGACGCGCACCCTGACTGAG
AGTGACGCAGCGGCTGCAGAAACTACAGACACTACCACCACATCGCCCGC
GGGTCTTGTCCAAGGCGATACAACAGCAGTCACTACACCTACCGCGACGG
CAACAACATCCAGCACTGCTAAGGTGCCGGGGGTGGGCAATGCGGACAAT
CCAAATTTGGACCTGGAAGCGCTGGCGGGCCTACTGCAGCACCAATTTGT
CCCTGCCGTGCCTGGAGGGATGGGCGATCACATACAGAAGCCGGAAACAG
CGTCTCAAACGGATGCGCTCGGAAACGTTATCACGCACATGATGGGGCCC
TTGGAGGTGGGGAAGAAAAAGCTGGAGAAAGGGAAAGAGAGGGAAGGAGA
CAAAAGCGCAAAGGACAAGCAGGGGAAGGAAGACGAAGGAGAGACCGAAC
GCCCAGGTTTGGGGGATGCCTTTTATGATCGGGCCTCGAGCCATCTGATG
TCTCACAGCGCCCGCAACTTTCAAAAGATGCAGGAAGCGGTTGGCAGCAT
CATGGCCCAGGAGGGGATTATGACATGGGAGGACGGGATGGAAGGCTTTG
GGGAATAAATTTGAAGGGAGAGAAGAAGAAAAGTAGGATAGAAGAGACGG
AGAGGAATGAAAGCCAGAGGAGGAAAGAATACTGCAAAGCACAATTGTGG
TGTAGGATAGTTATGGATACAGAAGAAAAGTGGTGAAGAGAGATGAGGAT
AGTCAACGACAGAAGGCTTGCTTCTTTTAACTTTAAATCTACTGAAAGAT
CAACAGGTGGCTTCACACCTTGCTTGACCATTCTTCTCGTCTTTCTCTAT
CTCCATGTCTCTCTTCTTCCACTTCAACCGCTTCATTGAGGAGACCCAAG
AAATTGTGACAATTGACCGATCACATATACATGGTACATTTGTGAATGGC
CCTTCCCCTCAGAGTTCAAAAAGGGAAAGATTACATTACATTACATTAGA
TTCATACGTTACCATTTCCAAATGCTTCGATAGAAACATATTTTCCCTTT
CCCCTCTTTGTTCACTGTGAGGCAATGTTTCCTTTCCCGATCTCACAGCC
AGCAACAAATGCAAAATCCGTTTGAGCGAAAACCACCTAATGGCAGGATG
CATGTACGTATTCTCTTCTCTTCTTATACGTCCTTCAGCTCTTCCTCCTC
ATGTCCCTCCCCCACCATTCCTTCCCTCACCTCACCAAAGAAGGACATTG
GCCTTTGGTTTCGGTCTTGGATGAGTCGGGAGAGGTCGAGGAAGAGGAGG
AGTGGGAGGTGAAAGAGAAGGAGGAAGAGGCCATTGCCTTCATTCTAGTT
ATAGGTATGGAGGAAAAGTGACATTTGCAGTAGATATACTTGTCTTAAGA
GGGAGGGCAAGGGGTGTGGAATCTGGGGGTGTCACAACCAAAATTTTGAC
AACGCGCAGTAGACAGTACATACAGGTCGAAACAGACGAAGAGAAGAAAG
GACACGGGCTCCATAAAAGTAAGGTCATATATACAGACAAGTAGCATCGT
TGCTCTGCCACCGGATGCAGAGATTTATCAATAATAAGGGTCGAGGCAGG
CATCTCCTGTCATCTCATCTTGACTTTTCT
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protein sequence of NO21G02400.1

>NO21G02400.1-protein ID=NO21G02400.1-protein|Name=NO21G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=972bp
MKCLVPLPTTLLVLMVLHSSIIPFTYRSTPSLLCCAAHVMVGDDSSLVEV
KRRSLWELSVVWDKLGHFVARLWHGHHDEDEECEKIRHPLSKTMSLSANE
TATTLVTQNDSTPVTTHRHLQKGVGEHSKDTELRALKMVQVSRARDVTSH
ERLWATVIDDDNMVDERKNDEDYVHQQTTTGPKPILVGDLVEHYSSLSAV
LQDIPDNEDPDTYSLNIKNPYQESTLPVSEAPLYPKPGDHTRSPYHPESA
EHTRDIERDDDNGKIIYMTSFKTVTGDVPTEQVEEFSQDEPENYADDVIE
THFSSPHHQRQLFMHPEDFKLHAHKHNNDKKDEKVDPYYSKDNGLWRRKF
KGPKTPQGFPLPDSTSEVRHHHIHQHQRQLREQARANMSETELAQIQEEA
REELVQALRSAARDAEAHRTDLSVGNSLESVMKALAVRRPPVPGFTMGTP
MVETQPQNTKEREQVRLPGDGMQPKVDNPLPPGRKHRRLRGLQQAGAASG
TGVGAALAGTFTEAQKAELRQMFYDAALSMMREAARQALNTNQGGSSGGS
SNSMFPSANGNNVGSNVVNQDAYTAALNAMINAVGSKEVNNANGGIASHS
GGPGGKVESSGKNGGGSGAPAKKQSLLEVAREVARHNSPSAGRPPIAAGR
QPNGQRKLRGLKTTVRLPVPYTRNSSSNDTLISIIRNGTDAIYVPLRHVD
PSLQEEAFARLGPLGPIIQGAAGAIGGESVKETEDGKRFYGGQGSVTNPS
HPKGHEWAEWLLVLVKKHKAHQHWQQEERTTRTLTESDAAAAETTDTTTT
SPAGLVQGDTTAVTTPTATATTSSTAKVPGVGNADNPNLDLEALAGLLQH
QFVPAVPGGMGDHIQKPETASQTDALGNVITHMMGPLEVGKKKLEKGKER
EGDKSAKDKQGKEDEGETERPGLGDAFYDRASSHLMSHSARNFQKMQEAV
GSIMAQEGIMTWEDGMEGFGE*
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Synonyms
Publications