NO21G02380, NO21G02380 (gene) Nannochloropsis oceanica

Overview
NameNO21G02380
Unique NameNO21G02380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1914
Alignment locationchr21:715238..717151 -

Link to JBrowse

Properties
Property NameValue
DescriptionAnkyrin repeat protein, putative
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:715238..717151 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007712NSK007712Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02380.1NO21G02380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02380.1NO21G02380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02380 ID=NO21G02380|Name=NO21G02380|organism=Nannochloropsis oceanica|type=gene|length=1914bp
ATGGCTGTTCGAGTAACTCGCGGGACAAGCATCCTGAGCGAGCTTCGGGG
TCGATTTCGCTATCCTGGCTCCGCCTCTTTCAGACAAGAAGGAGACGAGC
AGCAGCAGCAGGAGCAGCAGCAATTGGAGGAAGAAGACGCAGAGGCAGGG
GAGCAGCACACGATGGCGGCCTTGGACAGTGATTCAGATGCTACAGTGAA
CACGGATCCTTTGAGTGAGCTTGAAGAATACTTCCCCGCGGGCGAGGAGG
ACGACGACATCGAGGACAAGGACGAGGAGGAGGAGGTGGAGGGACACGAT
GGTGGCACCACCCGCAAGCAGGGCTTATATCCTTCAATCCTGATCGAAGA
CCAGCAAGAAAAAGGAGAGACGACAACGTTATCTCCCTCCTCAATCTTGT
CCCTGGTGGAGAAACGACTCCACCACAACCAAGCGTCTGCTGCCCTCCCT
CGTGGTGCTCCTACCGGCGCAGGAACCTCTCCCTCCATCCCGCAAACCTC
CGACGCCTCCCAGCCGTCGAGCTCTCCCTCCATCCCTCCTTCTTTCTCCT
CCTCCCCTTCTCCGTCAAAGAAAGCAAGCCCCTTCTTCCAACTCATAGAA
CGAAGGCAATCTTCTTCCTCCACTGTTTTAGGGCTTAATTCTCCCTTCCC
TTCCTCCCTTCGTACACCCGCCTCAGCCGCGACCGATGCTGGAGAAAAGA
GGGAAGGCAAGAGGGAAAAAATGCAGGGAGGGGAAGAGACGCCCAAGACG
ACGTCAATGTTTGCATTTTACCCCCTCAAGACTAGGACGGAGGGGGGGAA
CGAAGGGAGGAAGGAGGGAGGGAGGGAGGAGGGAATGGAGAGAGAGAAGG
AGGTCACGAAGCGCTTCATTCGTTCCCTTGACATCTATGGTTTGTGCGCG
GAAGGCAGGAAGGGGAACGGAGAAATGGGTGAGGAGGGATTTGACATGAG
CGAGGAAAAGCAAATGTGTTTGTTGGGAAGTCGGGGGGACAATGCGCTGT
TGCTGGCTGCCCGTTTGAATGATGCAGAGATGGTGAGGAGACTCCTTGAA
GAGGGGAGATGGAAGAGTGATGTGAGAAATGCGTATGGTGAGACACTGCT
CCACCTGGCGGTGAGTGGTGGGAGAGGCCATGTCTCTCTCTTGCCTTTCC
TGGGAATATTAGTCGGAGAGGGAAGGAGGGTGGGAGGGACGGAGGGAGGG
AATGTGGGTGGGTGGAATGTTCGGACTGTCCTCGGAAGGACGCCGTGGAT
GGAGGCGGCGGTGTGTGGTAATATAGAGGGTTTGAAGGCATTGTGGAGGG
AGGGAGGGAGGGAGGGCGGGCTGGAGGTCGGGGCCGTTGATAATGATGGG
AGGAACGCCTTACATCTCGCTGTCATGTATCGGCAGGAAGAGGCAGTTTA
TTGGTTGGTCGAGAGGGATGGAGGAAGAGAGGGCGATGGATGGAGGAAGG
GAGTGTTGTTACAGGGGAGGGATAAGGATGGGATGACACCGCTTCATTTT
GCGGCCATGTACAACAGTGTGAAATTGGCGCAGATGCTTTTGAACGAGGG
AGGAAGTGAGGGAGGGAGGGCGAGGACGAAGGAAGGGGAAACCCCAATGC
AGGTGGCGGAGAGATTTGGGCATGTGTGGACGAGGAGGGCTCTGGAAATA
ATGATGGAGGAGGCAAAGGACGAGGAAAGGGGGGTGGAAGGGGAGGAGGA
AGAGGGGGCGATGGAGAGTCAGACAAACAGCAAGGCTAGATTGCACAAGT
GGAACGGAGGGAAGGGGGAAGGGAGGGAGGAAGTAAGCGGGGGAATGCAG
GTGAGGATAATGGTGGGGGGGAGGGAAGTGATTTTGGAGGGGATGCAAAT
TGAATGTGTCGAGATAGTGGGGGGATGGGAGAGAGGGAGAGAGGGAGGGG
GGTTGGCGATGTAA
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protein sequence of NO21G02380.1

>NO21G02380.1-protein ID=NO21G02380.1-protein|Name=NO21G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MAVRVTRGTSILSELRGRFRYPGSASFRQEGDEQQQQEQQQLEEEDAEAG
EQHTMAALDSDSDATVNTDPLSELEEYFPAGEEDDDIEDKDEEEEVEGHD
GGTTRKQGLYPSILIEDQQEKGETTTLSPSSILSLVEKRLHHNQASAALP
RGAPTGAGTSPSIPQTSDASQPSSSPSIPPSFSSSPSPSKKASPFFQLIE
RRQSSSSTVLGLNSPFPSSLRTPASAATDAGEKREGKREKMQGGEETPKT
TSMFAFYPLKTRTEGGNEGRKEGGREEGMEREKEVTKRFIRSLDIYGLCA
EGRKGNGEMGEEGFDMSEEKQMCLLGSRGDNALLLAARLNDAEMVRRLLE
EGRWKSDVRNAYGETLLHLAVSGGRGHVSLLPFLGILVGEGRRVGGTEGG
NVGGWNVRTVLGRTPWMEAAVCGNIEGLKALWREGGREGGLEVGAVDNDG
RNALHLAVMYRQEEAVYWLVERDGGREGDGWRKGVLLQGRDKDGMTPLHF
AAMYNSVKLAQMLLNEGGSEGGRARTKEGETPMQVAERFGHVWTRRALEI
MMEEAKDEERGVEGEEEEGAMESQTNSKARLHKWNGGKGEGREEVSGGMQ
VRIMVGGREVILEGMQIECVEIVGGWERGREGGGLAM*
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Synonyms
Publications