NO21G02070, NO21G02070 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G02070 vs. NCBI_GenBank
Match: EWM22711.1 (phf20l1 protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 102.1 bits (253), Expect = 7.300e-18 Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0 Query: 217 LEGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRN 267 LEGVWHEG VKEVDGVQGYR+HFLGWS RWDEW+E+GSERIQP Y+KV N Sbjct: 205 LEGVWHEGVVKEVDGVQGYRVHFLGWSHRWDEWIESGSERIQPCYTKVPN 254
BLAST of NO21G02070 vs. NCBI_GenBank
Match: ETI46612.1 (hypothetical protein F443_09006 [Phytophthora parasitica P1569] >ETO75310.1 hypothetical protein F444_09066 [Phytophthora parasitica P1976]) HSP 1 Score: 80.9 bits (198), Expect = 1.700e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 218 EGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVV--DVRREEGLVRCEYSHDS--RWIDPTGEEVCLPNTHFSRELDQAMPQKMEQIF 345 + VW+E V + ++H+ GW+ +WDEW+E S RI P Y+KVRNWR + DAV V V R W + V+ + +G +R E D +W+D E +C P TH + ++ +M + M +F Sbjct: 525 DNVWYESRVVALSSTL-VKLHYRGWTSKWDEWIERTSTRIAPLYTKVRNWR-AFKVDDAVMVGRQVASKRYPEWRNAVVIALEACEVDGRLRIEVEIDGCYQWMDAQDEMLCPPGTH--KAVNSSMLKHMVPLF 654
BLAST of NO21G02070 vs. NCBI_GenBank
Match: ETK86544.1 (hypothetical protein L915_08828 [Phytophthora parasitica] >ETL39952.1 hypothetical protein L916_08757 [Phytophthora parasitica] >ETM46377.1 hypothetical protein L914_08708 [Phytophthora parasitica] >ETP16409.1 hypothetical protein F441_08968 [Phytophthora parasitica CJ01A1] >ETP44459.1 hypothetical protein F442_08942 [Phytophthora parasitica P10297]) HSP 1 Score: 80.9 bits (198), Expect = 1.700e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 218 EGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVV--DVRREEGLVRCEYSHDS--RWIDPTGEEVCLPNTHFSRELDQAMPQKMEQIF 345 + VW+E V + ++H+ GW+ +WDEW+E S RI P Y+KVRNWR + DAV V V R W + V+ + +G +R E D +W+D E +C P TH + ++ +M + M +F Sbjct: 525 DNVWYESRVVALSSTL-VKLHYRGWTSKWDEWIERTSTRIAPLYTKVRNWR-AFKVDDAVMVGRQVASKRYPEWRNAVVIALEACEVDGRLRIEVEIDGCYQWMDAQDEMLCPPGTH--KAVNSSMLKHMVPLF 654
BLAST of NO21G02070 vs. NCBI_GenBank
Match: ETL93089.1 (hypothetical protein L917_08675, partial [Phytophthora parasitica]) HSP 1 Score: 80.9 bits (198), Expect = 1.700e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 218 EGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVV--DVRREEGLVRCEYSHDS--RWIDPTGEEVCLPNTHFSRELDQAMPQKMEQIF 345 + VW+E V + ++H+ GW+ +WDEW+E S RI P Y+KVRNWR + DAV V V R W + V+ + +G +R E D +W+D E +C P TH + ++ +M + M +F Sbjct: 546 DNVWYESRVVALSSTL-VKLHYRGWTSKWDEWIERTSTRIAPLYTKVRNWR-AFKVDDAVMVGRQVASKRYPEWRNAVVIALEACEVDGRLRIEVEIDGCYQWMDAQDEMLCPPGTH--KAVNSSMLKHMVPLF 675
BLAST of NO21G02070 vs. NCBI_GenBank
Match: XP_008905899.1 (hypothetical protein PPTG_11554 [Phytophthora parasitica INRA-310] >ETN08712.1 hypothetical protein PPTG_11554 [Phytophthora parasitica INRA-310]) HSP 1 Score: 80.9 bits (198), Expect = 1.700e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 218 EGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVV--DVRREEGLVRCEYSHDS--RWIDPTGEEVCLPNTHFSRELDQAMPQKMEQIF 345 + VW+E V + ++H+ GW+ +WDEW+E S RI P Y+KVRNWR + DAV V V R W + V+ + +G +R E D +W+D E +C P TH + ++ +M + M +F Sbjct: 525 DNVWYESRVVALSSTL-VKLHYRGWTSKWDEWIERTSTRIAPLYTKVRNWR-AFKVDDAVMVGRQVASKRYPEWRNAVVIALEACEVDGRLRIEVEIDGCYQWMDAQDEMLCPPGTH--KAVNSSMLKHMVPLF 654
BLAST of NO21G02070 vs. NCBI_GenBank
Match: KUF75997.1 (hypothetical protein AM587_10008352 [Phytophthora nicotianae] >KUF85053.1 hypothetical protein AM587_10003692 [Phytophthora nicotianae]) HSP 1 Score: 80.9 bits (198), Expect = 1.700e-11 Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 0 Query: 218 EGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVV--DVRREEGLVRCEYSHDS--RWIDPTGEEVCLPNTHFSRELDQAMPQKMEQIF 345 + VW+E V + ++H+ GW+ +WDEW+E S RI P Y+KVRNWR + DAV V V R W + V+ + +G +R E D +W+D E +C P TH + ++ +M + M +F Sbjct: 525 DNVWYESRVVALSSTL-VKLHYRGWTSKWDEWIERTSTRIAPLYTKVRNWR-AFKVDDAVMVGRQVASKRYPEWRNAVVIALEACEVDGRLRIEVEIDGCYQWMDAQDEMLCPPGTH--KAVNSSMLKHMVPLF 654
BLAST of NO21G02070 vs. NCBI_GenBank
Match: OWZ16611.1 (Ubiquitin-specific protease [Phytophthora megakarya]) HSP 1 Score: 79.3 bits (194), Expect = 5.000e-11 Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 0 Query: 221 WHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEV---RSAVFQDRWLSGTVVDVRREEGLVRCEYSHDSRWIDPTGEEVCLPNTH 328 W+E T+ E+D + ++H+ GWS +WDEW+ S R+ P +SKVR+WR + D V+V R + W +G VV + LV+ + D W+D E +C P TH Sbjct: 103 WYEATIVELDETRA-KVHYRGWSIKWDEWLARTSPRLMPLHSKVRDWRK-FRVNDEVQVGQGRPGKKRMMWRNGKVVATVKSL-LVQLKIDDDLHWMDAQDERLCPPGTH 209
BLAST of NO21G02070 vs. NCBI_GenBank
Match: XP_009528048.1 (hypothetical protein PHYSODRAFT_255396 [Phytophthora sojae] >EGZ18990.1 hypothetical protein PHYSODRAFT_255396 [Phytophthora sojae]) HSP 1 Score: 76.3 bits (186), Expect = 4.300e-10 Identity = 39/114 (34.21%), Postives = 61/114 (53.51%), Query Frame = 0 Query: 217 LEGVWHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEV---RSAVFQDRWLSGTVVDVRREEGLVRCEYSHDSRWIDPTGEEVCLPNTH 328 LE W+E T+ + Q ++H+ GWS +WDEW+ S R+ P +SKVR+WR + D V+V R + W V+ + +V+ + +D RW+D E +C P TH Sbjct: 144 LEHKWYEATIVGITEGQA-KVHYRGWSTKWDEWLARTSPRLMPLHSKVRDWR-RFRVNDEVQVGDERPGKKRMLWRDARVLATAKSL-MVQLQIDNDVRWMDAQDERLCPPGTH 254
BLAST of NO21G02070 vs. NCBI_GenBank
Match: POM65362.1 (Hypothetical protein PHPALM_18931, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 75.9 bits (185), Expect = 5.600e-10 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 221 WHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVVDVRREEGLVRCEYSHD--SRWIDPTGEEVCLPNTH----FSRELDQA 336 W+E V ++D V ++H+ GW+ +WDEW+ S R+ P ++ V NWR Q D V V S V R W + V E+G ++ E D +W+D E +C TH S E+DQ+ Sbjct: 229 WYEARVLDMDAVY-VKVHYRGWTSKWDEWIRRTSGRLAPLHTNVPNWR-AFQVDDEVLVGSEVPGKRYPEWRNARVTAYDNEDGSLQIEVDIDGKKKWLDAQDELLCQKGTHKAVNASAEVDQS 350
BLAST of NO21G02070 vs. NCBI_GenBank
Match: POM61184.1 (hypothetical protein PHPALM_29839, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 75.1 bits (183), Expect = 9.500e-10 Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 221 WHEGTVKEVDGVQGYRIHFLGWSGRWDEWVEAGSERIQPSYSKVRNWRVCLQPGDAVEVRSAVFQDR---WLSGTVVDVRREEGLVRCEYSHD--SRWIDPTGEEVCLPNTH----FSRELDQA 336 W+E V ++D V ++H+ GW+ +WDEW+ S R+ P ++ V NWR Q D + V S V R W + V E+G ++ E D +W+D E +C TH S E+DQ+ Sbjct: 230 WYEARVLDMDAVY-VKVHYRGWTSKWDEWIRRTSGRLAPLHTNVPNWR-SFQVDDEILVGSEVPGKRYPEWRNARVTACDNEDGSLQIEVDIDGKKKWLDAQDELLCQKGTHKAVNASAEVDQS 351 The following BLAST results are available for this feature:
BLAST of NO21G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G02070 ID=NO21G02070|Name=NO21G02070|organism=Nannochloropsis oceanica|type=gene|length=4558bpback to top protein sequence of NO21G02070.1 >NO21G02070.1-protein ID=NO21G02070.1-protein|Name=NO21G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=689bpback to top Synonyms
Publications
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