NO21G01860, NO21G01860 (gene) Nannochloropsis oceanica

Overview
NameNO21G01860
Unique NameNO21G01860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1762
Alignment locationchr21:555688..557449 +

Link to JBrowse

Properties
Property NameValue
DescriptionHistone-lysine N-methyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:555688..557449 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
Homology
BLAST of NO21G01860 vs. NCBI_GenBank
Match: XP_002681273.1 (hypothetical protein NAEGRDRAFT_78553 [Naegleria gruberi] >EFC48529.1 hypothetical protein NAEGRDRAFT_78553 [Naegleria gruberi])

HSP 1 Score: 131.3 bits (329), Expect = 8.000e-27
Identity = 84/267 (31.46%), Postives = 140/267 (52.43%), Query Frame = 0
Query:  124 VEATMPPGVAIRPNAFGLGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQALPRFAMAEPYVIASYLAEHPEVYFLDLRSQHSRGYEAEGGVSKGGEDEVGIEVTFDEEGGCKA---VATKAWASGEVLLRD--IQLPQAPQQHLQQEGEQQCLE 386
            +  T+P G+AI+   +G GLFAT+ F    ++Y+   I +P++ A + TL +T  G  + L+   HSV  ++   +R LY +D+FMNH CDP+T S  T        Y M ALR I  G+++TCDYN+FE+D     I  C CG+S C+G + GF+YL  E+   R    +  V+ + +AE P   F+ ++                 + +  I+    + G CK    VA++++ +GE + ++  I  P+     ++  G++  LE
Sbjct:    9 IHETIPEGIAIKAGEYGFGLFATKFFAKNSSVYVGRQIVIPNVYA-EFTL-ITDQG-TFKLNTDTHSVQFNE--NQRWLYLFDSFMNHSCDPSTISEQTEEMKITNQYAMVALRDINPGDQITCDYNIFEYDCHGKVIEKCCCGSSNCIGRVAGFKYLTLEEQKERIQFVDDEVLQA-MAEDPTNKFMFVK-----------------DLKCPIDRVIIQSGPCKGYRMVASRSYKAGETIFKNHSIIFPEDTNIVVELNGKRLWLE 252          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: OLP86945.1 (Histone-lysine N-methyltransferase ASH1L [Symbiodinium microadriaticum])

HSP 1 Score: 112.8 bits (281), Expect = 2.900e-21
Identity = 69/184 (37.50%), Postives = 98/184 (53.26%), Query Frame = 0
Query:  132 VAIRPNAFGLGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKEL-TYGMKALRGIATGEELTCDYNLFEFDAGDAAISL--CQCGASGCLGAIKGFRYLRFEQALPRFAMAEPYVIASYLAEHPEVYFLD 313
            V +R    G GL AT+  + GE ++      +PD+  GKV L+      EY+LD+  H+ +    P  R++   D+F NH C+PN     T   N+ +  YG+ AL+ I+ G ELT DY LF+ D     + L  C+CG+S C G+I+G +Y   E  L R A  EP   A  L +HP V FLD
Sbjct:  532 VEVRDKDCGKGLVATQPIRQGELIFRAKFHILPDL-PGKVLLQY--GSVEYVLDVFVHASLLR--PNIREMGEVDSFTNHSCEPNIFYTSTQFWNESIGDYGVYALKNISPGTELTADYELFDIDLQTVGMDLSPCKCGSSTCRGSIRGCKYWPLEVILRRLAEVEPIPRAYLLEQHPTVQFLD 710          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: WP_014802758.1 (SET domain-containing protein [Turneriella parva] >AFM12247.1 nuclear protein SET [Turneriella parva DSM 21527])

HSP 1 Score: 104.8 bits (260), Expect = 8.000e-19
Identity = 63/170 (37.06%), Postives = 96/170 (56.47%), Query Frame = 0
Query:  119 SLPLCVEATMPPGVAIRPNAFG-LGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQAL 288
            S P+   A +PP + +RP   G +G+FA   F+ G  +Y  +   VP+ A     + +T  GE  I D++ H+V ++D  G R  + +D+FMNH CD NT S +     +++ Y   A + IA G+E+TC+Y LF++D    +   C CGASGC G I GF  L F++ L
Sbjct:    4 STPVREIAVIPPQIELRPTKNGYIGIFARYDFKKGTDIYSHTFRAVPEDAE---IILVTPLGEVPI-DIKVHTVRRAD--GMRDYFGFDSFMNHSCDANTISMMYPGDAEKMRYYTHAAKDIAAGDEITCNYLLFDWDCDGHSFD-CLCGASGCFGHIGGFTDLSFDRQL 166          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: XP_002296687.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86888.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 91.3 bits (225), Expect = 9.100e-15
Identity = 66/215 (30.70%), Postives = 97/215 (45.12%), Query Frame = 0
Query:  124 VEATMPPGVAIRPNA--FGLGLFATRSFQAGETLYITSCIYVPDIAAGKV-TLRLTGSGEEYILDMQE-----------------HSV------VQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQALPRFAMAEPYVIASYLAEHPEVYFLD 313
            + + +P G AI  N    G  + AT+ F+AGE LYI     +     G +  LR+    E+   +                    HSV       +SD   KRQ+Y +D FMNH CD N    + + +  E++Y   ALR I  GEE+TCDY LF++      I LC CG+  C G + GF  L         ++ E   I SY+ +  +  F++
Sbjct:  114 LHSIIPNGFAIADNEKFEGKKIIATKGFKAGEVLYIGHAALLDLSDMGNIFKLRVYEHDEDTENNFMNGVHPNRRFLNEYDNSATHSVDDHADGSKSDSTSKRQVYGWDGFMNHSCDTNAYFPLLSRSANEMSYKAIALRDIVAGEEVTCDYALFDYHCNGHEIELCACGSPNCRGKMTGFSGL---------SLCEKVNILSYVEQEIKDKFIN 319          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: KKS68794.1 (hypothetical protein UV40_C0045G0007 [Parcubacteria group bacterium GW2011_GWA1_42_7] >KKS92028.1 hypothetical protein UV67_C0012G0014 [Parcubacteria group bacterium GW2011_GWC1_43_12])

HSP 1 Score: 78.2 bits (191), Expect = 8.000e-11
Identity = 50/160 (31.25%), Postives = 77/160 (48.12%), Query Frame = 0
Query:  128 MPPGVAIRPNAFGLGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDA--GDAAISLCQCGASGCLGAIKGFRYLRFEQ 286
            +PP + I+ +  G GLFA +  + G  L+     +  +I  G  T R+        L + E   ++S    K     +D F+NH C+PN       C     T  + AL+ I   EEL+ DYN+ E+D   G      C+CG+  C+G +KGF++L  EQ
Sbjct:    3 IPPFIKIKKSHSGKGLFAKKIIKKGSKLF----HFNGEIMDGAYTDRIKS------LQIDEDKFLESTAESK-----FDDFLNHSCNPN-------CRIDWQTLNLTALKDIQKDEELSFDYNISEYDLLNGGNFSFKCECGSKNCIGEVKGFKHLSLEQ 140          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: XP_001622536.1 (predicted protein [Nematostella vectensis] >EDO30436.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 73.9 bits (180), Expect = 1.500e-9
Identity = 42/120 (35.00%), Postives = 62/120 (51.67%), Query Frame = 0
Query:  184 LDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTS------SFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQALPRFAMAEPYV 298
            +D ++H +  S+L          ++ NH CDPN        + +T    KEL++ + A R I  GEE+T DY L E+D  D     C+CGA  CLG ++GF+YL  +Q   R A   P +
Sbjct:   47 VDKEKHILPASNL----------SYTNHSCDPNAEFVFKPRNGITVPKGKELSWYLVARREIKQGEEVTFDYTLTEYDMNDP--FECKCGADDCLGTVRGFKYLNNKQQQERLAHISPAI 154          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: XP_002297463.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86239.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 71.6 bits (174), Expect = 7.500e-9
Identity = 46/141 (32.62%), Postives = 66/141 (46.81%), Query Frame = 0
Query:  140 GLGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRY 281
            G G+ A+R F  G  +  +S +   D          T       +D  +H  +  DLP +        F+NH CD N    + A  N+  +Y   ALR I +G+E+  DY   EF+ G  A S C CGA+ C G I+GF+Y
Sbjct:  116 GWGVHASRPFPKGSIVLSSSLLQSND----------TSCSHSIQIDWNQH--IMMDLPAR--------FLNHSCDANVGVMMVA--NEGGSYDFVALREIESGDEIRFDYETTEFEVG--AFSDCHCGATTCRGNIRGFKY 232          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: XP_022805134.1 (histone-lysine N-methyltransferase, H3 lysine-36 specific-like [Stylophora pistillata] >PFX16351.1 Histone-lysine N-methyltransferase, H3 lysine-36 specific [Stylophora pistillata])

HSP 1 Score: 70.5 bits (171), Expect = 1.700e-8
Identity = 55/175 (31.43%), Postives = 76/175 (43.43%), Query Frame = 0
Query:  146 TRSFQAGE-----------TLYITSCIYVPDIAAGKVTLRLTG----SGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTS--------SFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQALPRFAMAEPYV 298
            TRS Q GE                SC  + DI AG     L G    S + + + ++++  V  +   K        ++NH CD N          SF T   N ++++ M A R I  G+ +T DYN+ E+D   A    C CG+  CLG IKGF+YL  EQ   R     P V
Sbjct:    7 TRSLQIGEMHSDKLAVIEIKANFLSCQALEDITAGSFLTDLWGAVKNSPDSHTVQVEKNKHVTPEGVMK--------YVNHSCDSNAKFIFEKRRVSFPTLPDNHKVSWHMVATRNIKKGQGITFDYNVTEYDM--AEHFQCNCGSEKCLGEIKGFKYLTPEQQKSRSRDLSPVV 171          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: AJT69947.1 (hypothetical protein T261_8354 [Streptomyces lydicus])

HSP 1 Score: 68.9 bits (167), Expect = 4.900e-8
Identity = 52/157 (33.12%), Postives = 73/157 (46.50%), Query Frame = 0
Query:  130 PGVAIRPNA-FGLGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQ 286
            P VA+RP A  GLG+FA R F A E +++   + V D            +   + +D   H  V+ D P +          NH C+PNT        N E  Y   AL  IA G E+  DY   E+++   A+  C CG++ C GA  GFR+L  +Q
Sbjct:   10 PQVAVRPVAEKGLGVFALRDFAADEVVFVGRLVAVVD----------ERTEHSFQVDWGRH--VELDSPAR--------LTNHSCEPNTG----LRDNAEGGYDFIALHPIAAGSEICWDYASTEWES--IAVPSCLCGSALCRGASLGFRHLTRQQ 140          
BLAST of NO21G01860 vs. NCBI_GenBank
Match: WP_078984148.1 (SET domain-containing protein [Streptomyces lydicus])

HSP 1 Score: 68.9 bits (167), Expect = 4.900e-8
Identity = 52/157 (33.12%), Postives = 73/157 (46.50%), Query Frame = 0
Query:  130 PGVAIRPNA-FGLGLFATRSFQAGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKRQLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYNLFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQ 286
            P VA+RP A  GLG+FA R F A E +++   + V D            +   + +D   H  V+ D P +          NH C+PNT        N E  Y   AL  IA G E+  DY   E+++   A+  C CG++ C GA  GFR+L  +Q
Sbjct:   17 PQVAVRPVAEKGLGVFALRDFAADEVVFVGRLVAVVD----------ERTEHSFQVDWGRH--VELDSPAR--------LTNHSCEPNTG----LRDNAEGGYDFIALHPIAAGSEICWDYASTEWES--IAVPSCLCGSALCRGASLGFRHLTRQQ 147          
The following BLAST results are available for this feature:
BLAST of NO21G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 19
Position :
0
Zoom :
x 1
2004006008001000120014001600Expect = 8.00e-27 / Id = 31.46SequenceXP_002681273.1OLP86945.1WP_014802758.1XP_002296687.1KKS68794.1XP_001622536.1XP_002297463.1XP_022805134.1AJT69947.1WP_078984148.1
Match NameE-valueIdentityDescription
XP_002681273.18.000e-2731.46hypothetical protein NAEGRDRAFT_78553 [Naegleria g... [more]
OLP86945.12.900e-2137.50Histone-lysine N-methyltransferase ASH1L [Symbiodi... [more]
WP_014802758.18.000e-1937.06SET domain-containing protein [Turneriella parva] ... [more]
XP_002296687.19.100e-1530.70predicted protein [Thalassiosira pseudonana CCMP13... [more]
KKS68794.18.000e-1131.25hypothetical protein UV40_C0045G0007 [Parcubacteri... [more]
XP_001622536.11.500e-935.00predicted protein [Nematostella vectensis] >EDO304... [more]
XP_002297463.17.500e-932.62predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_022805134.11.700e-831.43histone-lysine N-methyltransferase, H3 lysine-36 s... [more]
AJT69947.14.900e-833.12hypothetical protein T261_8354 [Streptomyces lydic... [more]
WP_078984148.14.900e-833.12SET domain-containing protein [Streptomyces lydicu... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004593NSK004593Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01860.1NO21G01860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|203183gene_8151Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01860.1NO21G01860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01860 ID=NO21G01860|Name=NO21G01860|organism=Nannochloropsis oceanica|type=gene|length=1762bp
GATGGACGACGACCGCTACCGCCGATGCGAGGCCGAAAGGGGCTGTCTGA
GGAAGAGGGATTCGAGGAAAAATGGGCGCTCCTGCTGTTTCTGCTCCTGT
CAAAGCAGTAGTTGCTGTTGCTGCTACTGGAGTGCTGGCGGGCGCGGCAT
GGGAACGATGGGGGAATAGAGGGGTGTTGTCTAAACCCGCTGAGGTCACT
GTTTGTTTGAAGGAGGAGGAGGCGCGGAGGTCGCGGTCTTCTTCTGGTGG
CAACACCTGCAACGGCATTCCACATGCGGCCGGCCTGTgtatgtgggtgg
agaaggtgtaagtgtgttgagtgtgcggccctggatacattcacggcctg
ctgcaatcgagactcccatagtcatcaaaaatcgcctttgggcgaggcga
ggcccgaggcgtgctctttttcgaagttcgtgccatcatctgcacttcga
ctacccgaactctcaacacaccacaacaattgcccctttttaccgttttc
ctacagCCATGATCACCACCATTCAGAAGCATGTTACCGGTCCCACTTCC
CCACCGACCATTTTCGAGGAAGAAAAAGGGGTGGAAATCAGTACCAGCAC
CAGCAGCACCGGCACTAGCACCAGCGACAGCCCCACAAACGCAAGCCTGC
CCTTGTGCGTCGAGGCCACTATGCCGCCGGGAGTAGCAATCCGTCCCAAC
GCCTTTGGCCTCGGGCTATTTGCCACGCGATCATTTCAGGCGGGCGAAAC
GCTGTACATCACGTCTTGCATCTACGTGCCAGACATCGCTGCGGGCAAGG
TTACTTTACGACTCACCGGCTCAGGAGAAGAGTACATCCTCGACATGCAA
GAGCACTCGGTCGTTCAATCTGACCTACCGGGCAAGCGGCAGCTGTATAC
GTACGACGCGTTTATGAATCATGGATGCGACCCCAACACTTCCTCCTTCG
TCACAGCCTGTACAAATAAGGAGCTCACCTACGGGATGAAAGCCCTGCGT
GGCATTGCTACGGGCGAAGAACTTACCTGTGATTACAATCTGTTTGAATT
CGACGCTGGGGACGCGGCGATTTCCCTTTGTCAATGCGGGGCGAGCGGGT
GCCTAGGTGCGATAAAGGGCTTCCGGTATCTAAGATTTGAGCAGGCATTG
CCGAGATTTGCGATGGCGGAGCCCTATGTAATTGCTTCTTATCTGGCAGA
ACACCCGGAGGTATACTTTTTAGACCTCCGGTCGCAGCATTCGAGGGGGT
ACGAGGCGGAGGGGGGAGTGAGCAAAGGAGGGGAGGACGAGGTAGGGATA
GAGGTCACGTTTGACGAAGAGGGTGGATGCAAGGCCGTGGCGACCAAGGC
GTGGGCGTCAGGTGAAGTACTGTTGAGGGACATCCAACTACCTCAGGCTC
CACAGCAGCACCTGCAGCAGGAGGGGGAGCAGCAGTGCCTAGAGGTGCGG
AAGTCCCAGGCATTTGTTGTGGTGCTGGCGCCGGGCGTCGCGCAGGGGTC
GGCGTCGGTTGACTTGACGGGCTTTGGGATAGGAGGGAAAGATAGGGAGG
AGAGGAAGAAGGGAGGGGAGGAGATGAAGGAGACCTGGCCAATACGCCTC
CTATTTGGTGGAGGAGCGAGGAGGAAGGGCGAGGAGGGCGGTGCGAATAT
CCGAGTCGAGAGAGAGGGAGGAAGGGAAGGAGAAAGGGAGACGTACAGGG
TGGTTGTGACTGCGGCGATCGCGATGGGGCAGGCAGTGGTGGTCGGAATG
GAGGAAAAATGA
back to top

protein sequence of NO21G01860.1

>NO21G01860.1-protein ID=NO21G01860.1-protein|Name=NO21G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MGAPAVSAPVKAVVAVAATGVLAGAAWERWGNRGVLSKPAEVTVCLKEEE
ARRSRSSSGGNTCNGIPHAAGLSMITTIQKHVTGPTSPPTIFEEEKGVEI
STSTSSTGTSTSDSPTNASLPLCVEATMPPGVAIRPNAFGLGLFATRSFQ
AGETLYITSCIYVPDIAAGKVTLRLTGSGEEYILDMQEHSVVQSDLPGKR
QLYTYDAFMNHGCDPNTSSFVTACTNKELTYGMKALRGIATGEELTCDYN
LFEFDAGDAAISLCQCGASGCLGAIKGFRYLRFEQALPRFAMAEPYVIAS
YLAEHPEVYFLDLRSQHSRGYEAEGGVSKGGEDEVGIEVTFDEEGGCKAV
ATKAWASGEVLLRDIQLPQAPQQHLQQEGEQQCLEVRKSQAFVVVLAPGV
AQGSASVDLTGFGIGGKDREERKKGGEEMKETWPIRLLFGGGARRKGEEG
GANIRVEREGGREGERETYRVVVTAAIAMGQAVVVGMEEK*
back to top
Synonyms
Publications