NO21G01730, NO21G01730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO21G01730 vs. NCBI_GenBank
Match: EWM22659.1 (hypothetical protein Naga_100023g6 [Nannochloropsis gaditana]) HSP 1 Score: 357.8 bits (917), Expect = 3.700e-95 Identity = 207/315 (65.71%), Postives = 236/315 (74.92%), Query Frame = 0 Query: 34 LLASSVVPEASAFLPLHSCSCLPS--PSSCRSSVASHARTPVSTPQSFGKRALVXXXXXXXXXXXXXXXXKGLRGDVLRDSGSSTSRQANDTTGSAGAGSACDPNNPFFTSEFGEDXXXXXXXXXXXXXXXXXXXXXXXXEWLLNFSRDDPDLYTETFSKPEERKARAAATKNRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMRRLGLARELTDQIKENHPDPDYPST 347 L+++S+ EASAFL L S L S +SC+ S A ++FG+ XXXXXXXXXXXXXXX R+ NDTT A +G+A DP+NPFFTSEFGE EWLLNFSRDDPD +TETFS P+ER++RA ATK+RYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTAR+GD+IDG+QA+ALLEAMHGWDHAIM+DMYTWDSLRELAASH++PIAKVLQVCDEEGFALPFGLRSHLR+EQYARLMRRLG+A+ELTD I+E HPDPDYPST Sbjct: 16 LISTSISSEASAFLYLSSSCPLSSRPQTSCQRSKTRFA----DKSRNFGRSV---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLNDTTAPA-SGAAFDPHNPFFTSEFGEQELEDNSSTSPETEAEREKRLQEEDEWLLNFSRDDPDSHTETFSDPKERQSRARATKDRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARIGDVIDGDQAFALLEAMHGWDHAIMFDMYTWDSLRELAASHEIPIAKVLQVCDEEGFALPFGLRSHLRVEQYARLMRRLGMAQELTDHIREAHPDPDYPST 322
BLAST of NO21G01730 vs. NCBI_GenBank
Match: XP_009040959.1 (hypothetical protein AURANDRAFT_67233 [Aureococcus anophagefferens] >EGB04402.1 hypothetical protein AURANDRAFT_67233 [Aureococcus anophagefferens]) HSP 1 Score: 108.2 bits (269), Expect = 5.100e-20 Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMRRLGLARELTDQIKENHPD 341 TV +VA Y+ PIS+V DA+ FG+ PPI+ AR+ D++D +QA+ALLEA+ D A + D Y L +A + P+A+V C +EGF LP G+ + LR EQY L R G A D + + + D Sbjct: 169 TVADVADDYRFPISYVADAILGFGIPPPIRDDARIADILDADQAFALLEAVTSLDAAEVEDAYVAFDLARVAGLLEAPLAEVFAACVDEGFGLPHGVETQLRREQYEALRSRFGFAAYAPDPLDKVYED 297
BLAST of NO21G01730 vs. NCBI_GenBank
Match: GAX19470.1 (hypothetical protein FisN_19Hh045 [Fistulifera solaris]) HSP 1 Score: 102.4 bits (254), Expect = 2.800e-18 Identity = 48/114 (42.11%), Postives = 75/114 (65.79%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMRRLG 326 T++E+ Y VPI ++ D LC +G PPI R+GDL+ GEQA+ALLEA++ D A + D Y+ SL ++ ++ +A+ Q+ EG++LPFG+ ++LR+EQ L+R LG Sbjct: 144 TLQEICTDYSVPICYIADVLCMWGTEPPIHVHDRLGDLVTGEQAFALLEAVNSLDVAALQDRYSNQSLWQVCQEWEIDLAQGFQMAMTEGWSLPFGVHTNLRVEQENELIRVLG 257
BLAST of NO21G01730 vs. NCBI_GenBank
Match: GAX16465.1 (hypothetical protein FisN_19Lh045 [Fistulifera solaris]) HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17 Identity = 47/114 (41.23%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMRRLG 326 T++E+ Y VPI ++ D LC + PPI R+GDL+ GEQA+ALLEA++ D A + D Y+ SL ++ ++ +A+ Q+ EG++LPFG+ ++LR+EQ L+R LG Sbjct: 147 TLQEICTDYSVPICYIADVLCMWRTEPPIHMHDRLGDLVTGEQAFALLEAVNSLDVAALQDRYSNQSLWQVCQEWEIDLAQGFQMAMTEGWSLPFGVHTNLRVEQENELIRVLG 260
BLAST of NO21G01730 vs. NCBI_GenBank
Match: XP_002179174.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC48997.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.8 bits (242), Expect = 6.900e-17 Identity = 44/111 (39.64%), Postives = 75/111 (67.57%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMR 323 T+ E+A Y VP+ ++ D LC +GV PIQ R+GDL+ GEQA+++LEA++ D + ++D Y+ +L +L A +D+ + ++ +EG++LPFG+ + LR+EQ L+R Sbjct: 165 TLNEIATDYGVPVCYLADVLCMWGVPVPIQVHDRLGDLVTGEQAFSILEAINSLDISALHDRYSNHNLIQLCAEYDIELQTAFEMAMKEGWSLPFGVNTCLRVEQSDELVR 275
BLAST of NO21G01730 vs. NCBI_GenBank
Match: XP_002293200.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89661.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 96.3 bits (238), Expect = 2.000e-16 Identity = 43/114 (37.72%), Postives = 72/114 (63.16%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMRRLG 326 T++E+A Y VPI ++ D + +GV PI R+GD++ GEQA+++LEA+H D A +++ Y+ D+L + +D+ + + G+ALPFG+R+ LR+EQ L+ LG Sbjct: 296 TLKEIAMDYSVPICYLADVVAGWGVPVPIDPLGRLGDMVTGEQAFSMLEAIHTLDIAALHERYSEDNLVNICDFYDIDLKEAFDFAMTRGWALPFGVRTFLRVEQEEELLEALG 409
BLAST of NO21G01730 vs. NCBI_GenBank
Match: CBJ28029.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.0 bits (201), Expect = 3.900e-12 Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLM 322 ++ Y P+ + D LC +GV PI R+GD+ID EQA AL EA+ G D A + D Y DSL +L+ D+P+ + Q C + LP G +H+ +++Y L+ Sbjct: 183 SINNAVFEYGFPVEFFLDMLCRWGVTLPINQDRRLGDMIDAEQAAALCEALTGLDAADVRDNYLDDSLEDLSFDLDIPLPDLFQACAAQKINLPKGGDTHITIDEYKLLL 292
BLAST of NO21G01730 vs. NCBI_GenBank
Match: PFH31266.1 (hypothetical protein BESB_031400 [Besnoitia besnoiti]) HSP 1 Score: 77.4 bits (189), Expect = 9.700e-11 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQY 318 TV +A + VP ++GD LC GV PPI + DL D + L+E + D A +++MY D++ ++A D PI V C+ LPFG +S L +E Y Sbjct: 889 TVRSLAEGFSVPEDFIGDFLCRQGVQPPIPVDVPLKDLTDPAAVWNLVEYLQIQDPAQIHNMYPLDTIEQIAEEFDCPIQHVFDACEALKIKLPFGAQSRLNVECY 994
BLAST of NO21G01730 vs. NCBI_GenBank
Match: PHJ21067.1 (hypothetical protein CSUI_005091 [Cystoisospora suis]) HSP 1 Score: 75.5 bits (184), Expect = 3.700e-10 Identity = 38/114 (33.33%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 212 TVEEVARSYQVPISWVGDALCNFGVV-PPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQYARLMRRL 325 TV +A ++ VP ++GD LC G+V PPI + +L D + L+E + D A ++DMY D++ +A + P+ +VL CD LPFG+ S + ++ Y L + L Sbjct: 851 TVHSLAEAFAVPEDFIGDFLCRQGMVDPPIPVDVPLRELADPAAVWNLIEYLQLQDPARIHDMYPMDTIEHIAEDFNCPVQRVLDACDALRIKLPFGVSSRVNVDCYGALTKLL 964
BLAST of NO21G01730 vs. NCBI_GenBank
Match: XP_008887579.1 (hypothetical protein HHA_282150 [Hammondia hammondi] >KEP61749.1 hypothetical protein HHA_282150 [Hammondia hammondi]) HSP 1 Score: 74.7 bits (182), Expect = 6.300e-10 Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 0 Query: 193 EERKARAAATKNRYDFTCLTVEEVARSYQVPISWVGDALCNFGVVPPIQWTARMGDLIDGEQAYALLEAMHGWDHAIMYDMYTWDSLRELAASHDLPIAKVLQVCDEEGFALPFGLRSHLRLEQY 318 EERK R N TV+ +A ++ VP ++GD LC GV PP+ + +L D + L+E + D A +++MY D++ ++A + P+ ++ C+ LPFG +S L +E Y Sbjct: 477 EERK-RKYLEGNPNGVVTETVQSLAEAFSVPEDFIGDFLCRQGVQPPVPVDVPLKELTDPAAVWNLVEYLQVQDPAQIHNMYPLDTVEQIAEEFNCPVQYIIDACEALKIKLPFGTQSRLNVECY 600 The following BLAST results are available for this feature:
BLAST of NO21G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01730 ID=NO21G01730|Name=NO21G01730|organism=Nannochloropsis oceanica|type=gene|length=1603bpback to top protein sequence of NO21G01730.1 >NO21G01730.1-protein ID=NO21G01730.1-protein|Name=NO21G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bpback to top Synonyms
Publications
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