NO21G01250, NO21G01250 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G01250
Unique Name	NO21G01250
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2856
Alignment location	chr21:378904..381759 -

Link to JBrowse

Properties


Property Name	Value
Description	Threonine aldolase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:378904..381759 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016829	lyase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006520	cellular amino acid metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR015424	PyrdxlP-dep_Trfase
IPR001597	ArAA_b-elim_lyase/Thr_aldolase

Homology

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BLAST of NO21G01250 vs. NCBI_GenBank
Match: EWM22625.1 (threonine aldolase [Nannochloropsis gaditana])

HSP 1 Score: 990.3 bits (2559), Expect = 4.000e-285
Identity = 597/894 (66.78%), Postives = 672/894 (75.17%), Query Frame = 0

Query:   14 LVMASRGLHLLAVLALLVCEVVQGWVRPSLVTP---KPFSAPLQRRPLLQPRLPISP---TSFSFLASTSMKTGFET--AAPTGSASTNGPSTNNNASPTIYSAVTVRQGFSDFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDASLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKILSPYKELFLH----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGKAAMDE---VDLVVHGVSTSEKGFVVILARKDEPAQESIDARTQKKAIKVVITPSDPMSAGLDVHQAETPEAVTLLQLLQDIDVGSYLKHDALSTLVGVKAGHPVTLNRVVLEHLSVEGAGGASNSNKRFKARLEVDVGDIEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPAVSGVGGMPLPGSAAPTTVVKAEVKSAFQAMALAFRYNAQLAAAVSILEDPTVTVDLGEVRGIFPDLLELKPGGMKASPTTVASALDLDAEYEITRLEKQLRAALAAGGGLEQQAVVAKLRRQLALYAPDFQELSVGGRMGGMEDLRLLESAAPSFYAQAAEGGV 887
            ++  S  L ++ +L  ++CE    WV P L  P     F + +Q   L    LP  P   T  S LAS S  +G ET    P G   T+ P+TN    P  Y AV VRQGFSDFRSDTVT PTQQMRKAMSKAEVGDDV+REDPTVDQLEREVA++LGHEAALFVPSRTMGNLISIMIWCS+RGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPH+E DGSL L+S+RKAI+EE++DASLAQLITLENPVDRCGGRVLS  Y+ESVAALAHEHGLKLHLDGSRIWNAAVA GVDVKEMTKHADSVTVC+SKGLGAPAGSLLVGSRAFTEKARK+RKALGGAMRQVGVLAAAGLVALKR+LPRLAEDHENA+RLA GLS+LPGLK+N  AVETNIVM+D +DRLPLSPPELLEELE+RNVLALAVGPRR+R VTHYDVSE D+KKA+  F+K+L PYKELFL+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 A G A+  E   VD+VV GVSTSE+GFVV+LA K+   QE  +    +KA+KVV+TPSDPMSAGLDVH AETPEA+TLLQLLQDIDVGSYLKHDALS+LVGV+AGHPV+L RVV+E LS     G +NSNKRFKARLEV+VGD+EG                                              PA +    +P  GSAAPT VV+ EVKS+FQAMALAFRYNA++A   +ILEDP V ++ G++RGI PDLLELKPGGMKASPTTVASALDLDAEYEI RLEKQL+AALAAG   +Q+AVVAKLR+QLALYAPD Q+L+     G  + L LL+SA PSFYA AA+GGV
Sbjct:    1 MLRLSSRLAVIPLLLTVLCERSTAWVGPGLARPCVTGSFGSRIQNWHLRPEELPPRPSFLTLSSPLASASATSGSETXXXXPAGVPITS-PTTN----PPPYPAVAVRQGFSDFRSDTVTLPTQQMRKAMSKAEVGDDVFREDPTVDQLEREVASILGHEAALFVPSRTMGNLISIMIWCSARGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHSEADGSLSLESLRKAIVEESSDASLAQLITLENPVDRCGGRVLSTTYLESVAALAHEHGLKLHLDGSRIWNAAVAAGVDVKEMTKHADSVTVCMSKGLGAPAGSLLVGSRAFTEKARKLRKALGGAMRQVGVLAAAGLVALKRTLPRLAEDHENARRLAKGLSTLPGLKVNVEAVETNIVMIDFEDRLPLSPPELLEELERRNVLALAVGPRRIRMVTHYDVSEGDIKKAITVFEKVLQPYKELFLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVSLERGAPGVIDTTATVVVNNTLPGPTAAGSAAAGPASQAEETLVDVVVQGVSTSERGFVVVLAEKEGEGQEGSEGGRPRKALKVVVTPSDPMSAGLDVHAAETPEAITLLQLLQDIDVGSYLKHDALSSLVGVRAGHPVSLKRVVIEQLSAGRGVGGNNSNKRFKARLEVEVGDMEG----------------------ASSSANEQALKEEERGGNSSAVSAPAGAIGDSVPPTGSAAPTRVVEPEVKSSFQAMALAFRYNARMAVVNNILEDPLVAIEFGDLRGILPDLLELKPGGMKASPTTVASALDLDAEYEILRLEKQLQAALAAG---DQEAVVAKLRKQLALYAPDLQDLA-----GLEKGLPLLDSATPSFYANAAQGGV 859

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: XP_005854754.1 (threonine aldolase, partial [Nannochloropsis gaditana CCMP526] >EKU21599.1 threonine aldolase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 502.7 bits (1293), Expect = 2.600e-138
Identity = 249/283 (87.99%), Postives = 270/283 (95.41%), Query Frame = 0

Query:  175 MGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDASLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDK 458
            MGNLISIMIWCS+RGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPH+E DGSL L+S+RKAI+EE++DASLAQLITLENPVDRCGGRVLS  Y+ESVAALAHEHGLKLHLDGSRIWNAAVA GVDVKEMTKHADSVTVC+SKGLGAPAGSLLVGSRAFTEKARK+RKALGGAMRQVGVLAAAGLVALKR+LPRLAEDHENA+RLA GLS+LPGLK+N  AVETNIVM+D +DRLPLSPPELLEELE+RNVLALAVGPRR+R VTHYDVSE D+KKA+  F+K
Sbjct:    1 MGNLISIMIWCSARGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHSEADGSLSLESLRKAIVEESSDASLAQLITLENPVDRCGGRVLSTTYLESVAALAHEHGLKLHLDGSRIWNAAVAAGVDVKEMTKHADSVTVCMSKGLGAPAGSLLVGSRAFTEKARKLRKALGGAMRQVGVLAAAGLVALKRTLPRLAEDHENARRLAKGLSTLPGLKVNVEAVETNIVMIDFEDRLPLSPPELLEELERRNVLALAVGPRRIRMVTHYDVSEGDIKKAITVFEK 283

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: WP_088570373.1 (low-specificity L-threonine aldolase [Thermoflexus hugenholtzii] >SNB60636.1 L-threonine aldolase [Thermoflexus hugenholtzii JAD2])

HSP 1 Score: 338.6 bits (867), Expect = 6.400e-89
Identity = 180/345 (52.17%), Postives = 234/345 (67.83%), Query Frame = 0

Query:  115 GFSDFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDASLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKIL 460
            G+ D RSDTVT PT  MR+AM++AEVGDDV+ EDPTV +LE   A  +G EAALFV S TM NL+S++  C  RG   I G+++H FL E GG A  GG+ P PVP N+ DG+L L+ I  AI  E       +LI LEN  +RC G  L  DY+ +V ALA  HGL++H+DG+RI+NAAVA  V   E+ +HAD+VT C+SKGL AP GSL+ G  AF  +AR++RK +GG MRQ GVLAAAGLVAL+  + RLAEDH  A+RLA GL+ +PG++I    V+TNIV+ +LD +LPL     L  L +R V  L  GPRR R VTHY + + D+ +AL A  +++
Sbjct:    4 GWIDLRSDTVTHPTPAMREAMARAEVGDDVFGEDPTVRRLEEVAAERMGKEAALFVASGTMANLVSLLTHC-GRGDEVIVGDQAHTFLSEVGGMAALGGIHPRPVP-NQPDGTLRLEDIEAAIRTEDVHHPRTRLIALENTHNRCMGAALPPDYLRAVRALADRHGLRVHIDGARIFNAAVALRVPAAELARHADTVTFCLSKGLCAPVGSLICGPAAFIREARRVRKMVGGGMRQAGVLAAAGLVALETMVDRLAEDHRRARRLAEGLAEIPGIRIEAHRVQTNIVIFELDPQLPLPEEAFLAALAERRVKILRWGPRRFRAVTHYWIDDTDIDQALRAIAEVV 346

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: GBD08247.1 (L-allo-threonine aldolase [bacterium HR22])

HSP 1 Score: 338.2 bits (866), Expect = 8.300e-89
Identity = 179/345 (51.88%), Postives = 233/345 (67.54%), Query Frame = 0

Query:  115 GFSDFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDASLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKIL 460
            G+ D RSDTVT PT  MR+AM++AEVGDDV+ EDPTV +LE   A  +G EAALFV S TM NL+S++  C  RG   I G+++H FL E GG A  GG+ P P+P N+ DG+L L+ +  AI  E       +LI LEN  +RC G  L+ +Y+  V ALA  HGLK+H+DG+RI+NAAVA GV   E+ +HAD+VT C+SKGL AP GSL+ G R F  +AR+IRK +GG MRQ GVLAAAGLVAL+  + RLAEDH  A++LA GL+ +PG++I    V+TNIV+ +LD RLPL     L  L    V  L  GPRR R VTHY + + D+ +AL A  +++
Sbjct:    4 GWIDLRSDTVTHPTPAMREAMARAEVGDDVFEEDPTVRRLEEAAAERMGKEAALFVASGTMANLVSLLTHC-GRGDEVIVGDQAHTFLSEVGGMAALGGIHPRPIP-NQPDGTLRLEDLEAAIRTEDVHHPRTRLIALENTHNRCMGAALTPEYMARVRALADRHGLKVHVDGARIFNAAVALGVPAAELARHADTVTFCLSKGLCAPVGSLICGPRDFIREARRIRKMVGGGMRQAGVLAAAGLVALETMVDRLAEDHRRARQLAEGLAEIPGIRIEAYRVQTNIVIFELDPRLPLEDEAFLAALADHRVRILRWGPRRFRAVTHYWIDDPDIDRALRAIAEVI 346

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: OGO63133.1 (threonine aldolase [Chloroflexi bacterium RBG_19FT_COMBO_55_16])

HSP 1 Score: 336.3 bits (861), Expect = 3.200e-88
Identity = 175/342 (51.17%), Postives = 234/342 (68.42%), Query Frame = 0

Query:  118 DFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDASLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKIL 460
            D RSDTVTQPT  MR AM++A VGDDV+ EDPTV++L+   AAL+G E  LFVPS TMGNL +++  C  RG   I G+K+H +L E GG +  GG+ P P+P N+ DG+L LD I+ +I  +     +++L+ LEN  +RCGG  L+  Y +SV  LAH+HGL+LHLDG+RI+NAAVA GV+ K++   ADSVT C+SKGL AP GS+L GS  F  +AR+IRK LGG MRQ GVLAAAG+VAL+  + RL EDH  AKRLA GL+++PGL + P    TN+V + L + + L   E   +L ++ V    V  RR R VTHY V +N V+ A+ AF +++
Sbjct:    5 DLRSDTVTQPTPAMRTAMAEAVVGDDVFGEDPTVNRLQEMAAALMGKEDGLFVPSGTMGNLAAVLAHC-GRGDEVILGDKAHTYLFEAGGISALGGIHPRPIP-NQADGTLALDDIQASIRPDDVHYPVSRLVALENTHNRCGGVTLTLGYTQSVGELAHQHGLQLHLDGARIFNAAVALGVNAKDLAGPADSVTFCLSKGLSAPVGSILCGSTDFITRARRIRKQLGGGMRQAGVLAAAGIVALETMVDRLGEDHVRAKRLAQGLATVPGLLLEPGTPYTNMVFLSLGEEISLRAAEAAAQLAQKGVRVGVVSERRFRLVTHYWVDDNGVEDAIAAFRELI 344

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: XP_012434755.1 (PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X1 [Gossypium raimondii] >XP_012434756.1 PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X1 [Gossypium raimondii] >XP_012434757.1 PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X1 [Gossypium raimondii] >KJB46043.1 hypothetical protein B456_007G345500 [Gossypium raimondii] >KJB46044.1 hypothetical protein B456_007G345500 [Gossypium raimondii])

HSP 1 Score: 335.9 bits (860), Expect = 4.100e-88
Identity = 177/349 (50.72%), Postives = 237/349 (67.91%), Query Frame = 0

Query:  118 DFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDA--SLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKILSPYKE 465
            D RSDTVT+PT+ MR AM+ AEV DDV+  DPT  +L+ EVA ++G EA LFVPS TMGNLIS+++ C  RGS  I G  SH+ + E GG A  GGV P PV +NE DG++ +D I  AI +   +      +LI LEN     GGR L  +YI+SV  LA +HGLKLH+DG+RI+NA+VA G+ V  + + ADSV+VC+SKG+GAP GS++VGS  F  KAR++RK LGG MRQVGV+ AA LVAL+ +L +L  DH+NAK LA GL+ + GL++N AAVETNI+  D+ +   +S  +L + L +R V  L  GP R+R V H+ +S +DV+  L  F +  S  +E
Sbjct:    7 DLRSDTVTKPTEAMRAAMATAEVDDDVFGADPTAVKLQSEVAKMMGKEAGLFVPSGTMGNLISVLVHCDVRGSEVILGNNSHIHIYENGGIATIGGVHPRPVKNNE-DGTMDIDLIEDAIRDPRGELVYPTTRLICLENSHGNTGGRCLPVEYIDSVGELAKKHGLKLHIDGARIFNASVALGIPVDRLVQAADSVSVCLSKGIGAPVGSVIVGSETFITKARRLRKTLGGGMRQVGVICAAALVALQENLIKLEGDHKNAKVLAEGLNQIKGLRVNVAAVETNIIFFDIVEGSKISGEKLYKHLVERGVFVLLEGPSRMRIVLHHQISSSDVQYTLSCFQQAFSGLQE 354

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: PPD68161.1 (hypothetical protein GOBAR_DD34954 [Gossypium barbadense])

HSP 1 Score: 335.5 bits (859), Expect = 5.400e-88
Identity = 177/349 (50.72%), Postives = 236/349 (67.62%), Query Frame = 0

Query:  118 DFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDA--SLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKILSPYKE 465
            D RSDTVT+PT+ MR AM+ AEV DDV+  DPT  +L+ EVA ++G EA LFVPS TMGNLIS+++ C  RGS  I G  SH+ + E GG A  GGV P PV +NE DG++ +D I  AI +   +      +LI LEN     GGR L  +YI+SV  LA +HGLKLH+DG RI+NA+VA G+ V  + + ADSV+VC+SKG+GAP GS++VGS  F  KAR++RK LGG MRQVGV+ AA LVAL+ +L +L  DH+NAK LA GL+ + GL++N AAVETNI+  D+ +   +S  +L + L +R V  L  GP R+R V H+ +S +DV+  L  F +  S  +E
Sbjct:    7 DLRSDTVTKPTEAMRAAMATAEVDDDVFGADPTAVKLQSEVAKMMGKEAGLFVPSGTMGNLISVLVHCDVRGSEVILGNNSHIHIYENGGIATIGGVHPRPVKNNE-DGTMDIDLIEDAIRDPRGELVYPTTRLICLENSHGNTGGRCLPVEYIDSVGELAKKHGLKLHIDGDRIFNASVALGIPVDRLVQAADSVSVCLSKGIGAPVGSVIVGSETFITKARRLRKTLGGGMRQVGVICAAALVALQENLIKLEGDHKNAKVLAEGLNQIKGLRVNVAAVETNIIFFDIVEGSKISGEKLYKHLVERGVFVLLEGPSRMRIVLHHQISSSDVQYTLSCFQQAFSGLQE 354

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: XP_005854761.1 (threonine aldolase [Nannochloropsis gaditana CCMP526] >EKU21606.1 threonine aldolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 335.1 bits (858), Expect = 7.000e-88
Identity = 194/319 (60.82%), Postives = 226/319 (70.85%), Query Frame = 0

Query:  532 ATGKAAMDE---VDLVVHGVSTSEKGFVVILARKDEPAQESIDARTQKKAIKVVITPSDPMSAGLDVHQAETPEAVTLLQLLQDIDVGSYLKHDALSTLVGVKAGHPVTLNRVVLEHLSVEGAGGASNSNKRFKARLEVDVGDIEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPAVSGVGGMPLPGSAAPTTVVKAEVKSAFQAMALAFRYNAQLAAAVSILEDPTVTVDLGEVRGIFPDLLELKPGGMKASPTTVASALDLDAEYEITRLEKQLRAALAAGGGLEQQAVVAKLRRQLAL 848
            A G A+  E   VD+VV GVSTSE+GFVV+LA K+   QE  +    +KA+KVV+TPSDPMSAGLDVH AETPEA+TLLQLLQDIDVGSYLKHDALS+LVGV+AGHPV+L RVV+E LS     G +NSNKRFKARLEV+VGD+EG                                              PA +    +P  GSAAPT VV+ EVKS+FQAMALAFRYNA++A   +ILEDP V ++ G++RGI PDLLELKPGGMKASPTTVASALDLDAEYEI RLEKQL+AALAAG   +Q+AVVAKLR+QLAL
Sbjct:   68 AAGPASQAEETLVDVVVQGVSTSERGFVVVLAEKEGEGQEGSEGGRPRKALKVVVTPSDPMSAGLDVHAAETPEAITLLQLLQDIDVGSYLKHDALSSLVGVRAGHPVSLKRVVIEQLSAGRGVGGNNSNKRFKARLEVEVGDMEG----------------------ASSSANEQALKEEERGGNSSAVSAPAGAIGDSVPPTGSAAPTRVVEPEVKSSFQAMALAFRYNARMAVVNNILEDPLVAIEFGDLRGILPDLLELKPGGMKASPTTVASALDLDAEYEILRLEKQLQAALAAG---DQEAVVAKLRKQLAL 361

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: KJB46045.1 (hypothetical protein B456_007G345500 [Gossypium raimondii])

HSP 1 Score: 335.1 bits (858), Expect = 7.000e-88
Identity = 176/347 (50.72%), Postives = 236/347 (68.01%), Query Frame = 0

Query:  118 DFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDA--SLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKILSPY 463
            D RSDTVT+PT+ MR AM+ AEV DDV+  DPT  +L+ EVA ++G EA LFVPS TMGNLIS+++ C  RGS  I G  SH+ + E GG A  GGV P PV +NE DG++ +D I  AI +   +      +LI LEN     GGR L  +YI+SV  LA +HGLKLH+DG+RI+NA+VA G+ V  + + ADSV+VC+SKG+GAP GS++VGS  F  KAR++RK LGG MRQVGV+ AA LVAL+ +L +L  DH+NAK LA GL+ + GL++N AAVETNI+  D+ +   +S  +L + L +R V  L  GP R+R V H+ +S +DV+  L  F  I+  +
Sbjct:    7 DLRSDTVTKPTEAMRAAMATAEVDDDVFGADPTAVKLQSEVAKMMGKEAGLFVPSGTMGNLISVLVHCDVRGSEVILGNNSHIHIYENGGIATIGGVHPRPVKNNE-DGTMDIDLIEDAIRDPRGELVYPTTRLICLENSHGNTGGRCLPVEYIDSVGELAKKHGLKLHIDGARIFNASVALGIPVDRLVQAADSVSVCLSKGIGAPVGSVIVGSETFITKARRLRKTLGGGMRQVGVICAAALVALQENLIKLEGDHKNAKVLAEGLNQIKGLRVNVAAVETNIIFFDIVEGSKISGEKLYKHLVERGVFVLLEGPSRMRIVLHHQISSSDVQYTLSCFQVIIRAF 352

[Close]

BLAST of NO21G01250 vs. NCBI_GenBank
Match: XP_017615864.1 (PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X2 [Gossypium arboreum] >KHG25609.1 L-allo-threonine aldolase [Gossypium arboreum])

HSP 1 Score: 333.6 bits (854), Expect = 2.000e-87
Identity = 175/349 (50.14%), Postives = 236/349 (67.62%), Query Frame = 0

Query:  118 DFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPTVDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHVFLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDA--SLAQLITLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVDVKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQVGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNIVMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKKALGAFDKILSPYKE 465
            D RSDTVT+PT+ MR AM+ AEV DDV+  DPT  +L+ EVA ++G EA LFVPS TMGNLIS+++ C  RGS  I G  SH+ + E GG A  GGV P PV +NE DG++ +D I  AI +   +      +LI LEN     GGR L  +YI+ V  LA +HGLKLH+DG+RI+NA+VA G+ V  + + ADSV+VC+SKG+GAP GS++VGS  F  KAR++RK LGG MRQVGV+ AA LVAL+ +L +L  DH+NAK LA GL+ + GL++N AAVETNI+  D+ +   +S  +L + L +R V  +  GP R+R V H+ +S +DV+  L  F +  S  +E
Sbjct:    7 DLRSDTVTKPTEAMRAAMATAEVDDDVFGADPTAVKLQSEVAKMMGKEAGLFVPSGTMGNLISVLVHCDVRGSEVILGNNSHIHIYENGGIATIGGVHPRPVKNNE-DGTMDIDLIEDAIRDPRGELVYPTTRLICLENSHGNTGGRCLPVEYIDRVGELAKKHGLKLHIDGARIFNASVALGIPVDRLVQAADSVSVCLSKGIGAPVGSVIVGSETFITKARRLRKTLGGGMRQVGVICAAALVALQENLVKLEGDHKNAKVLAEGLNQIKGLRVNVAAVETNIIFFDIVEGSKISGEKLYKHLVERGVFVMLEGPSRMRIVLHHQISSSDVQYTLSCFQQAFSGLQE 354

The following BLAST results are available for this feature:

BLAST of NO21G01250 vs. NCBI_GenBank

BLAST of NO21G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM22625.1	4.000e-285	66.78	threonine aldolase [Nannochloropsis gaditana]	[more]
XP_005854754.1	2.600e-138	87.99	threonine aldolase, partial [Nannochloropsis gadit...	[more]
WP_088570373.1	6.400e-89	52.17	low-specificity L-threonine aldolase [Thermoflexus...	[more]
GBD08247.1	8.300e-89	51.88	L-allo-threonine aldolase [bacterium HR22]	[more]
OGO63133.1	3.200e-88	51.17	threonine aldolase [Chloroflexi bacterium RBG_19FT...	[more]
XP_012434755.1	4.100e-88	50.72	PREDICTED: probable low-specificity L-threonine al...	[more]
PPD68161.1	5.400e-88	50.72	hypothetical protein GOBAR_DD34954 [Gossypium barb...	[more]
XP_005854761.1	7.000e-88	60.82	threonine aldolase [Nannochloropsis gaditana CCMP5...	[more]
KJB46045.1	7.000e-88	50.72	hypothetical protein B456_007G345500 [Gossypium ra...	[more]
XP_017615864.1	2.000e-87	50.14	PREDICTED: probable low-specificity L-threonine al...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL026	nonsL026	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR040	ncniR040	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR062	ngnoR062	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004654	NSK004654	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO21G01250.1	NO21G01250.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|602431	gene_8084	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100023g55	gene7810	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO21G01250.1	NO21G01250.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO21G01250 ID=NO21G01250|Name=NO21G01250|organism=Nannochloropsis oceanica|type=gene|length=2856bp
ATGATGGTCCATGAACAACAACAACAGATTAAGAGGCAGTTGGTGATGGC
ATCTAGGGGCCTTCACCTGCTAGCAGTGCTAGCATTGTTGGTGTGTGAGG
TCGTACAAGGATGGGTAAGACCAAGCTTGGTGACGCCCAAACCTTTTAGC
GCGCCCCTCCAACGACGACCACTCCTGCAGCCCCGCCTCCCCATATCCCC
CACCTCTTTTTCCTTCCTGGCTTCGACCAGCATGAAGACGGGCTTCGAGA
CAGCGGCACCTACAGGATCTGCATCTACCAACGGGCCTTCGACCAACAAC
AACGCATCCCCCACCATCTATTCTGCTGTGACTGTCCGCCAGGGATTTTC
CGACTTCCGAAGCGACACCGTCACGCAGCCCACGCAGCAAATGCGGAAAG
CCATGTCTAAGGCCGAGGTGGGGGATGACGTATATCGCGAAGACCCCACC
GTTGACCAGCTGGAGAGAGAGGTCGCGGCATTGCTGGGGCACGAGGCCGC
CTTGTTTGTGCCCAGCCGCACGATGGGGAATTTGATTAGCATCATGATTT
GGTGCTCTTCGAGGGGGTCTTCCTTTATTTGCGGAGAGAAGAGTCATGTG
TTCTTGTGTGAAGAAGGGGGTGCGGCTCAATTTGGGGGCGTGAGTCCTTT
CCCAGTGCCGCACAACGAGGTGGATGGGAGCTTGGGTTTAGATAGCATTC
GAAAGGCGATTTTGGAGGAGACAACGGATGCGAGCCTCGCGCAGTTGATT
ACGTTGGAAAATCCAGTGGATCGATGTGGAGGACGGGTACTATCGGCTGA
CTATATTGAGAGTGTCGCGGCGTTAGCTCATGAACATGGGTTGAAGTTGC
ACCTGGACGGTTCCAGGATTTGGAACGCGGCGGTGGCTACGGGGGTTGAT
GTGAAGGAGATGACCAAGCACGCGGATAGTGTCACAGTATGTGTGTCCAA
GGGGCTCGGCGCACCTGCGGGTTCTCTTCTTGTCGGCTCTCGGGCATTCA
CAGAGAAGGCACGGAAGATCCGCAAGGCCTTGGGTGGAGCCATGCGGCAA
GTAGGCGTTCTTGCCGCTGCTGGTCTCGTAGCACTCAAACGTTCCCTTCC
TCGCCTCGCGGAAGACCACGAAAATGCTAAGAGACTTGCTACTGGCCTTT
CTAGCCTCCCAGGTCTTAAGATTAATCCCGCGGCTGTCGAAACAAACATC
GTCATGGTTGACCTTGATGACCGCCTCCCCCTTTCCCCCCCCGAGCTGCT
CGAAGAACTTGAGAAACGCAACGTCCTTGCCCTCGCTGTCGGCCCCCGTC
GCGTTCGCTTCGTGACACACTACGACGTTTCGGAAAACGACGTCAAGAAA
GCTTTGGGGGCGTTCGACAAGATCCTTTCCCCCTACAAAGAACTCTTCCT
CCATCCCCCCCCTGCCGCAGCAGCGGCAGCAGTTGAAGCGGCCGCCACGG
CGAAAGCTGCGGCGGCAGCTGCTACTGCTGCGGCGGAGGCGGCGACAGTA
CAGCAGCTACAGGAGGTGGCGGGGCCACCGGGAGTGGTAGACACAACAGC
GACGGTGGTGGTAAACAACACCGTAGCGGCAGCCGCAGGAACAGCAACGG
GAAAAGCGGCGATGGATGAAGTTGATCTGGTTGTGCACGGCGTGAGCACC
AGCGAGAAGGGATTTGTCGTCATTTTGGCCCGAAAGGACGAGCCTGCCCA
GGAATCCATTGACGCGCGAACACAGAAGAAAGCAATTAAGGTAGTGATCA
CGCCCTCTGACCCGATGTCGGCCGGTCTCGACGTGCACCAAGCGGAGACC
CCCGAGGCAGTGACGTTGCTCCAGCTTCTCCAAGACATCGATGTGGGGTC
TTATTTGAAGCATGATGCCTTGTCGACCCTCGTGGGGGTAAAGGCCGGGC
ATCCCGTAACGCTGAATAGGGTGGTGCTGGAGCACTTGTCTGTTGAAGGG
GCGGGAGGCGCAAGCAATAGCAACAAGAGGTTCAAGGCGCGTTTGGAGGT
TGACGTAGGGGATATCGAGGGAGCAACGCCTACCGCCGGTGCAGCAGGCA
CAGGAGTCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCACAA
CAACAGCAGACATACAAGGATAACTCCTCTGCTAGTGCTACTGCTGTTGC
TCAAGGTGGTCCTGCGGTTAGCGGGGTGGGAGGGATGCCTCTTCCTGGCT
CGGCGGCTCCCACAACAGTGGTAAAAGCGGAAGTCAAGTCGGCGTTTCAG
GCTATGGCGCTAGCGTTCAGGTACAACGCCCAACTGGCTGCAGCTGTCTC
TATTTTAGAAGACCCTACGGTGACCGTTGACCTTGGGGAGGTCCGCGGAA
TTTTCCCTGACCTACTGGAGCTGAAGCCGGGAGGGATGAAAGCCAGCCCG
ACGACGGTCGCTTCCGCCCTGGATTTGGATGCGGAATATGAAATAACGCG
GTTGGAGAAGCAGCTCCGTGCAGCGTTAGCGGCGGGGGGGGGGCTGGAAC
AACAGGCCGTGGTGGCAAAATTGAGGAGGCAATTGGCGTTGTATGCGCCG
GATTTCCAGGAGCTCAGTGTTGGAGGCAGGATGGGTGGAATGGAGGATTT
GCGTTTGCTTGAATCGGCGGCACCCTCATTTTATGCGCAAGCGGCTGAAG
GAGGGGTGCAGCCGCATGAGCAGCAACCGCAGCAGCAGCAACCGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACA
GCAGCAGCAGCAGCAGCACCAGCAGAGGCGGGGTAGTAATAATAAGACTT
CTATGGCCCCTCCATTTATTCCTCCTCCGCCCGCGGACCTGATTGATTCT
CCATGA

protein sequence of NO21G01250.1

>NO21G01250.1-protein ID=NO21G01250.1-protein|Name=NO21G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=952bp
MMVHEQQQQIKRQLVMASRGLHLLAVLALLVCEVVQGWVRPSLVTPKPFS
APLQRRPLLQPRLPISPTSFSFLASTSMKTGFETAAPTGSASTNGPSTNN
NASPTIYSAVTVRQGFSDFRSDTVTQPTQQMRKAMSKAEVGDDVYREDPT
VDQLEREVAALLGHEAALFVPSRTMGNLISIMIWCSSRGSSFICGEKSHV
FLCEEGGAAQFGGVSPFPVPHNEVDGSLGLDSIRKAILEETTDASLAQLI
TLENPVDRCGGRVLSADYIESVAALAHEHGLKLHLDGSRIWNAAVATGVD
VKEMTKHADSVTVCVSKGLGAPAGSLLVGSRAFTEKARKIRKALGGAMRQ
VGVLAAAGLVALKRSLPRLAEDHENAKRLATGLSSLPGLKINPAAVETNI
VMVDLDDRLPLSPPELLEELEKRNVLALAVGPRRVRFVTHYDVSENDVKK
ALGAFDKILSPYKELFLHPPPAAAAAAVEAAATAKAAAAAATAAAEAATV
QQLQEVAGPPGVVDTTATVVVNNTVAAAAGTATGKAAMDEVDLVVHGVST
SEKGFVVILARKDEPAQESIDARTQKKAIKVVITPSDPMSAGLDVHQAET
PEAVTLLQLLQDIDVGSYLKHDALSTLVGVKAGHPVTLNRVVLEHLSVEG
AGGASNSNKRFKARLEVDVGDIEGATPTAGAAGTGVEQQQQQQQQQQQPQ
QQQTYKDNSSASATAVAQGGPAVSGVGGMPLPGSAAPTTVVKAEVKSAFQ
AMALAFRYNAQLAAAVSILEDPTVTVDLGEVRGIFPDLLELKPGGMKASP
TTVASALDLDAEYEITRLEKQLRAALAAGGGLEQQAVVAKLRRQLALYAP
DFQELSVGGRMGGMEDLRLLESAAPSFYAQAAEGGVQPHEQQPQQQQPQQ
QQQQQQQQQQQQQQQQQQQQQQHQQRRGSNNKTSMAPPFIPPPPADLIDS
P*

Synonyms

Publications