NO21G01010, NO21G01010 (gene) Nannochloropsis oceanica

Overview
NameNO21G01010
Unique NameNO21G01010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1731
Alignment locationchr21:322271..324001 -

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Properties
Property NameValue
DescriptionTransferase-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:322271..324001 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038941At4g14100-like
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO21G01010 vs. NCBI_GenBank
Match: EWM22600.1 (transferase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 351.3 bits (900), Expect = 2.300e-93
Identity = 158/195 (81.03%), Postives = 171/195 (87.69%), Query Frame = 0
Query:   22 VALLVLVLLLQLGQVQARLGGGSSKPTKKTPPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGEDGVD 217
            + LL +  LLQ+G V +RLG  S + TKKTPPVWPP LTA LLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNER NGSTYYYHK PE ESCQALNMHVG+LKPDWLAGARYKG+EDV GH CDVWAQSSS+HHPFVTYFAD +T+RPWRWIFFDGAIFDV+EWTPGGTL +  WQLPAYCF +D  D
Sbjct:   12 IILLCISSLLQIGLVHSRLGYASEQLTKKTPPVWPPQLTALLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERANGSTYYYHKAPEAESCQALNMHVGILKPDWLAGARYKGMEDVKGHLCDVWAQSSSLHHPFVTYFADAQTERPWRWIFFDGAIFDVLEWTPGGTLEDEAWQLPAYCFEKDRKD 206          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_005646088.1 (hypothetical protein COCSUDRAFT_17537 [Coccomyxa subellipsoidea C-169] >EIE21544.1 hypothetical protein COCSUDRAFT_17537 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 154.8 bits (390), Expect = 3.200e-34
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 0
Query:   43 GSSKPTKKT----PPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGEDGVDQVH 220
            G S  T  T    PPVWP    A  +QNR G+L+   L Y+   GRN N+I   Q G TL+D E  N ++YY++   E  +C+ +   VG+L PDWLA A Y G E+V+ H   VW ++      F+ Y+ADV T  P RWIFFDGA F+++ +    TLP+ADWQ P+YCF +     +H
Sbjct:   19 GGSNATSLTVPPEPPVWPETFHAVAVQNRSGSLALVDLYYEWQRGRNANLIHS-QLGTTLYDIEYTNHTSYYFNL--EEGTCRKITFPVGILTPDWLANATYLGTENVDAHDTHVWTKADG----FIKYYADVHTGLPVRWIFFDGAQFEILSFVVNETLPDADWQAPSYCFTDKSQKLLH 192          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_010066473.1 (PREDICTED: uncharacterized protein At4g14100 [Eucalyptus grandis] >KCW64357.1 hypothetical protein EUGRSUZ_G01982 [Eucalyptus grandis])

HSP 1 Score: 148.7 bits (374), Expect = 2.300e-32
Identity = 86/198 (43.43%), Postives = 111/198 (56.06%), Query Frame = 0
Query:   21 IVALLVLVLLLQLGQVQARLGGGSSKPTKKTPPVWPPLLTAQLLQNRG-GNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFG-EDGVD 217
            I A L L+LLL +  V + L   +  P   TP  WPP   A L  N   G L    L YDLPNGRNLN I+D+ +   L D E  NG++YYY    +  SCQ ++  VG+L+PDWL GA Y G   V+G  CD WA+       F+ Y+ DV T+RP  W FF+G    V+ +  G  L +A WQ PAYCFG ++G D
Sbjct:    9 ISAALPLLLLLLISAVASPLLSSAQAPA-ATP--WPPQFHAALFMNNSKGTLQLVDLWYDLPNGRNLNAIRDQLSPSVLHDVEWDNGTSYYY-TLGDGGSCQTMHFPVGILRPDWLDGASYLGRSRVDGFLCDGWAKVD-----FIRYYEDVATKRPVFWAFFNGMTAHVMTFEVGAVLEDAGWQAPAYCFGKKEGAD 197          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_010907973.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At4g14100-like [Elaeis guineensis])

HSP 1 Score: 147.5 bits (371), Expect = 5.100e-32
Identity = 79/206 (38.35%), Postives = 112/206 (54.37%), Query Frame = 0
Query:   14 SCLSFPTIVALLVL-VLLLQLGQ-----VQARLGGGSSKPTKKTPPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGED 214
            SC + P +V LL L V+ + L       +  R     +  T+ TP  WP    A L  N  G LS   L YD PNGRN NII+D+  G  L+D E  NG++++Y     + SC++  + VG+L+P+WLAGA Y G E V+G  C+VW +       F+ Y+ DV T RP  W+F+ G    V+ +  G  L +A WQ P YCF ++
Sbjct:    4 SCSTLPALVLLLFLSVIPIPLSSATSPTIPPRTTSSPASGTEPTPTPWPLQFHALLFMNYSGALSMIDLWYDWPNGRNXNIIQDQLDGPPLYDLEWNNGTSFFYTLSSPL-SCRSAQIDVGILRPNWLAGATYLGQEYVDGFLCNVWTKVD-----FIWYYEDVATNRPVHWVFYTGRAAHVMTFEVGAALEDAKWQAPVYCFDKE 203          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_014507362.1 (uncharacterized protein At4g14100 [Vigna radiata var. radiata])

HSP 1 Score: 147.1 bits (370), Expect = 6.700e-32
Identity = 69/161 (42.86%), Postives = 95/161 (59.01%), Query Frame = 0
Query:   52 PPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGE 213
            P  WP    + L  NR G+L  T L YD PNGRN NII+  Q G+  +D E  NG+++YY  QP  E+C+ ++  VG+L+P+WL GA Y G E  +   C+VW +       F+TY+ DV T+RP +WIFF G +  V+ +  G  L +  WQ P YCF E
Sbjct:   50 PADWPHQFHSVLFINRSGDLQKTDLWYDWPNGRNFNIIQ-HQLGVLTYDLEWDNGTSFYYTLQPFDETCKIIHFDVGILRPNWLHGANYLGQEHADNFLCNVWEKVD-----FITYYEDVLTRRPVKWIFFSGMVAHVMTFEVGAVLEDEHWQAPVYCFNE 204          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_009421020.1 (PREDICTED: uncharacterized protein At4g14100-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 146.7 bits (369), Expect = 8.700e-32
Identity = 73/172 (42.44%), Postives = 98/172 (56.98%), Query Frame = 0
Query:   42 GGSSKPTKKTPPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGED 214
            G + +    TP  WPP   + L  N  G LS   L YD PN RN NII+  Q G  L+D E GNG+++YY        C+ ++  VG+L+PDWL GA Y G E V+G  CDVW ++      F+ Y+ DVET+RP  W+F+ G    V+ +  G  L +A WQ PAYCF +D
Sbjct:   36 GRTGEGASPTPTPWPPQFHSLLYINYSGALSFVDLWYDWPNSRNFNIIQ-HQLGELLYDLEWGNGTSFYYTLDGNCR-CRTVDFDVGILRPDWLDGATYLGREAVDGFICDVWEKAQ-----FIWYYEDVETRRPVHWLFYTGRSVHVMTFEVGAALEDAKWQAPAYCFDKD 200          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_020233505.1 (uncharacterized protein At4g14100-like [Cajanus cajan])

HSP 1 Score: 146.7 bits (369), Expect = 8.700e-32
Identity = 70/169 (41.42%), Postives = 98/169 (57.99%), Query Frame = 0
Query:   44 SSKPTKKTPPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGE 213
            SS      P  WP    + L  NR G+L  T L YD PNGRN NII+  Q G+  +D E  NG+++YY  QP  ++C+ ++  VG+L+PDWL GA Y G E V+   C+VW +       F+ Y+ DV T+RP +WIF+ G +  V+ +  G  L + +WQ P YCF E
Sbjct:   24 SSMAEDPVPADWPEQFHSVLFINRSGSLQKTDLWYDWPNGRNFNIIQ-HQLGVLKYDLEWDNGTSFYYTLQPFDKTCKIIHFEVGILRPDWLHGATYLGQEYVDNFLCNVWEKVD-----FIWYYEDVLTRRPVKWIFYSGMVAHVMTFEVGAVLEDENWQAPVYCFNE 186          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: PNX73639.1 (transferring glycosyl group transferase [Trifolium pratense])

HSP 1 Score: 146.7 bits (369), Expect = 8.700e-32
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 0
Query:   52 PPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGE 213
            P  WP    + L  NR GNL  T L YD PNGRN NII+  Q G+  +D E  NG+++YY   P   +C+ L+  VG+L+P+WL GA Y G + V+   C+VW +       F+ YF DV T+RP +WIF+ G I  V+ +  G  L +A WQ P YCF E
Sbjct:   35 PAAWPEQFHSVLFINRSGNLQKTDLWYDWPNGRNFNIIQ-HQLGVLKYDLEWNNGTSFYYTLDPFNHTCKILHFDVGILRPNWLDGANYLGQQYVDNFLCNVWEKVD-----FIWYFEDVITKRPVKWIFYSGMIAHVMTFEVGAVLDDAHWQAPVYCFSE 189          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: OLP79720.1 (Uncharacterized protein AK812_SmicGene49112 [Symbiodinium microadriaticum])

HSP 1 Score: 146.4 bits (368), Expect = 1.100e-31
Identity = 74/169 (43.79%), Postives = 96/169 (56.80%), Query Frame = 0
Query:   52 PPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTG-LTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVE------DVNGHQCDVWAQSSSIHH---PFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCF 211
            P  WPP+  A +L+NR G L  T L YD P G NL+I  DR  G    +DNER NGSTYYY       +C+ + M VGLL P+WL  A Y G +      D +   C VW +  ++ +   PF+TYF D  T+ P RW+FF+G  FD++ W PG     A WQ+PA CF
Sbjct:   20 PSPWPPVFHAYMLKNRSGQLRHTDLFYDWPYGGNLHI--DRSPGQAPFYDNERQNGSTYYYTPN---GTCKVIEMGVGLLPPNWLEDAHYGGKQAVVSPTDQSIRNCHVWTKGDAMGNYTGPFITYFEDEVTKTPARWVFFNGMSFDILSWEPGKKATPAQWQIPASCF 183          
BLAST of NO21G01010 vs. NCBI_GenBank
Match: XP_021905658.1 (uncharacterized protein At4g14100-like [Carica papaya])

HSP 1 Score: 146.0 bits (367), Expect = 1.500e-31
Identity = 73/177 (41.24%), Postives = 105/177 (59.32%), Query Frame = 0
Query:   44 SSKPTKKTPPVWPPLLTAQL-LQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWDNERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQCDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPEADWQLPAYCFGEDGVDQVH 220
            SSKP + TP  WPP   + L + N+  +L    L YD PNGRN NII+  Q G  L+D E  NG++YYY    + E C+ ++  VG+L+P+WL GA+Y G + V+G  C+VW +       F+TY+ DV T+RP +W+F+ G    V+ +  G  L ++ WQ P YCF  DG  + H
Sbjct:   30 SSKPAEPTPSPWPPQFHSILVIVNKSSSLQKVDLWYDWPNGRNFNIIQ-HQLGKLLYDLEWNNGTSYYYTFGSKPE-CEVIHFPVGILRPNWLEGAKYLGQQSVDGFLCNVWDKVE-----FITYYEDVITKRPVQWVFYTGRAVHVMTFEVGAVLEDSAWQAPVYCF--DGRQKEH 197          
The following BLAST results are available for this feature:
BLAST of NO21G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22600.12.300e-9381.03transferase-like protein [Nannochloropsis gaditana... [more]
XP_005646088.13.200e-3442.54hypothetical protein COCSUDRAFT_17537 [Coccomyxa s... [more]
XP_010066473.12.300e-3243.43PREDICTED: uncharacterized protein At4g14100 [Euca... [more]
XP_010907973.15.100e-3238.35PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
XP_014507362.16.700e-3242.86uncharacterized protein At4g14100 [Vigna radiata v... [more]
XP_009421020.18.700e-3242.44PREDICTED: uncharacterized protein At4g14100-like ... [more]
XP_020233505.18.700e-3241.42uncharacterized protein At4g14100-like [Cajanus ca... [more]
PNX73639.18.700e-3243.48transferring glycosyl group transferase [Trifolium... [more]
OLP79720.11.100e-3143.79Uncharacterized protein AK812_SmicGene49112 [Symbi... [more]
XP_021905658.11.500e-3141.24uncharacterized protein At4g14100-like [Carica pap... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004679NSK004679Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01010.1NO21G01010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602341gene_8056Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100126g12gene7836Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01010.1NO21G01010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01010 ID=NO21G01010|Name=NO21G01010|organism=Nannochloropsis oceanica|type=gene|length=1731bp
TCCGTCAAGCAAGAGAGACGGGAAAATTCACCTGAATTTCTAAACAGGAA
CAAGAATTGCTGCCGAGGATTTAGCAGCGCTTTCAAAAGTACTGCGGAAA
GAGTCATCAGTTTTAAAATAGGGCACCCTCTTTTGTGTTTGTGCCAACGT
GAGCTTTATGTGTGGGGCTTCGCGTGGCACAGCATTTAAATTATCTGGGC
GTCGTGCAGCCCTCGTTACAAATTGACCTTGGTTGCCCATGGGTCTGCGT
CTTTCGTCTGCAGGTACATATGTGACGCTCACCCTCTCCCCGCCACCCTA
CCAGGACGTACATCCATATTTCCCACCGATTCAGGGTATATAAATGATCA
TGTCTTCCTGGAGCAACAGCAACAGCAGGAGAAGCTGCCTCTCCTTCCCC
ACCATTGTCGCACTCCTTGTCCTGGTCCTCCTCCTGCAGCTCGGCCAGGT
ACAAGCCCGGCTGGGTGGGGGTAGCAGCAAACCCACCAAGAAAACCCCGC
CCGTCTGGCCTCCCCTCTTGACAGCACgtaagtcttaagtggaagttgtg
gtggctgcttcgttgtccttttctactgtcctttaatctacctccccatc
catgaggttaaaaaccaaagtttccgctgcagccgtagctatgcacttag
agtcatcttaatgacagcttgggtcattgtcatggcggagctgtgtctct
attatccccccttgatctccccaggcttactcccgcaatcgtcttctttt
cctccttctttccccgtcccgtagAGCTGTTGCAAAACCGCGGTGGCAAC
TTGAGTGACACCACCCTTGCGTATGATTTGCCGAATGGCCGCAACCTGAA
CATCATCAAAGATAGGCAGACAGGATTGACCTTATGGGATAATGAGAGGG
GAAATGGCTCGACCTATTATTATCACAAGCAACCAGAGGTGGAGAGCTGC
CAGGCGCTGgtaaggaaaggagggagggactggaggaggaacggaaatag
ggttaaagtctgcggattgagctaaatttatctggtcaacaccatcttta
ccctgtccgaaataatgcagAACATGCACGTGGGTCTCCTAAAGCCTGAT
TGGTTGGCTGGGGCCCGCTACAAGGGCGTGGAGGACGTGAACGGGCACCA
GTGCGACGTCTGGGCGCAGTCGAGCTCCATACATCACCCTTTTGTCACTT
ACTTTGCGGATGTGGAGACACAGCGGCCGTGGCGGTGGATCTTTTTTGAT
GGGGCTATCTTCGATgtaagtcttcctttatttagttatttatttgtttc
aatttatttatctacttatcggtttacactttcgtcgattcatagggatg
tctggtaaatttgaagctacataaactatttgtcgagctcatttaagata
cccatgtctttcctttctttcctctcatacacgcttacattcacatccct
ccctcttttcagGTGATTGAATGGACCCCTGGAGGCACCCTGCCCGAGGC
CGACTGGCAGCTTCCTGCTTATTGCTTTGGGGAGGATGGGGTAGATCAAG
TGCACTTGGAGGAGCAAAGGCAGAAGGTTCGGTTGTCGATGGCATAAGTA
AATGAGAATGAAATAACAAGAAGCGTGGAAGACTGGAGGGAAAGGAGGAA
AAGGCATGGTGCGCTGGGGGCTCGCCTTCATCTCGGAAAAAGGATTAATA
ACAAGAACGCGCAGTTTTGTCACCAAAATAC
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protein sequence of NO21G01010.1

>NO21G01010.1-protein ID=NO21G01010.1-protein|Name=NO21G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bp
MIMSSWSNSNSRRSCLSFPTIVALLVLVLLLQLGQVQARLGGGSSKPTKK
TPPVWPPLLTAQLLQNRGGNLSDTTLAYDLPNGRNLNIIKDRQTGLTLWD
NERGNGSTYYYHKQPEVESCQALNMHVGLLKPDWLAGARYKGVEDVNGHQ
CDVWAQSSSIHHPFVTYFADVETQRPWRWIFFDGAIFDVIEWTPGGTLPE
ADWQLPAYCFGEDGVDQVHLEEQRQKVRLSMA*
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Synonyms
Publications