NO21G00810, NO21G00810 (gene) Nannochloropsis oceanica

Overview
NameNO21G00810
Unique NameNO21G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2886
Alignment locationchr21:272290..275175 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:272290..275175 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00810.1NO21G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|267110gene_9452Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|200210gene_8034Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00810.1NO21G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00810 ID=NO21G00810|Name=NO21G00810|organism=Nannochloropsis oceanica|type=gene|length=2886bp
ATGCAGTATCGCTACTCCTCTTCCTCCTCCTCCGCGTACCGTGGCTCCTC
GTCCTCCTCGTCCCGCATACCTGCTCCTGCCCATCGCGCCAACGCAAGCA
GCAGCAGCAGCGTCTCCCTGGATAGTATCCTGCGGTATAGTTGCACAGCG
ACGGGGGGGGGCAGAGGCAGCAGCAGTAATATTAGCAACAACAGCAGCAA
TAATAATAACAACGGCCGGGTGAGAGGCCTCCCTCTCCCTCACTCCCCCT
ACAACCGACAACAGCAGGAAAAGCAATCACAGCGCTCACTTTACGATCAC
TTTCAACAACAACAACAACTACATCGTCAATTGTCTACCGCCGATTTCCC
AGCGCCAGCTGCACCCCGTCCTCCTCCATCTCATCCACCACCGTACTACT
CGAATGAAGGAGGAGGAGGAGGAGGTGGAGGAAGAGGAGGAGGTGGGGGA
GACTGGACTGGTCTTGTCTCTGCTGCTGCTGCTGCTCCTCCTCCTTACAC
ATCTCTTATCATCGGCAATACACCTAGCCAACCTTCGCAACACTCCTATT
CGCAGTCCCAGCATACCCACCTCCAGCAGCAACAGCAGCAGCAGCGGCAG
GAGGGTGGGAGGGGAGGAAAGGAGGGAGGTGTGGATGACTTGGTAGCAGC
AAAGACACAGCAGCAAATGCTGGACTCACTACTCACACTTATTAAAGACG
TGCATGAAGTCAAGCGCCAGCTACAGGAGCAGCAGGAGGAGCAGGAGGAG
CACAACCACCATCAGGCAGTCCCGGCGAAGGCCTTTCCCCCCTCTCCTCC
ACCGTCTCCAGATCGACACCAGCAGCGACAGCAGCAGCATCAGCAGCATC
AGCAGCATCAGCAGCAAAAACAGCGAAAAGAACAAGAGCAACATCTAACA
GACATGCCCGCCCGTCTCAGTAAACTCGCGGCAGAACTCTCCTCCGTCCA
GGAGCAGCAACGAGTGGCAGCGGCCACAGCTGCAGCAGCCGCAGCTGCTG
CAATAGAGAGGGAACAGCAGGTAGAGGAGGAGGTGAGGATTCTAAAGGTG
AAGGTGGAAGGTATGGCGAATGAATTCAGGCTGCTCCGATTGGCGAGGGA
CGGGAAAGAGGAGGGAGGGAGGGAGGGAGCTGTGGAAGGAGGGGGAATTA
CTGCCGAGAGGGGAAAGGAGGGAGGGAGGGAGGGAGGAGTCCTCCATGGA
CCATACCCTCCTTCTGCCATAAAGCTCTTCTCGCGACCTCCTTTTCCTCC
TCCTCCACTGCCTGTTCGTGTTCTTCACCGTCGTCAACAGCAGCAGCAGC
AGCAGCAGCTTGATAAGAAAGAGGAGGAAGAGAAAGAGAAAGAGAAAGTG
CTTTGCGCTCAAATAGCTGAATTTGATGAAACGAAGAAGGAGGAAAAGAA
GAAGAACGAGGTATCGAAGGAGGGAGAGGCGGAGGCAGAGGCAGAGGAAG
AGGAAGAAGAGAGTCCTGATTTGCTTGCGGGGAGGAAACATTTCTCTTAT
CAACACCGAGATGGGGATGAGGAGGAGGAGAAAGAAGAAGAACAGGAACC
GAATGAAAGGGTAGAGGGAAGGAATGAAAAGGAGACGAGGGTGGTGGTGC
AGGGCGAGGAAGAGGAAGAGGAAATGGAGGAGACGATGACTGGGATTGAG
GTGGTGGTGGATGCACACTTGGCTGCTGCTGCTATTGCTACCGAAAACAA
AAACCAGCATGAGAAGGAGGATGAGGAGGAGGTGAGAAATCAAGGGAGGA
TTCTGAATGTGCATTTGGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGAAGCAGCAGAAGCAGCAGATGCGATGGTAGAGGATAAGGA
GGATCAGAAGCAGCAGAAGCAGCAGAAGCAGCAGCTGGATGTTGCCCCTC
CCCCTCGTCCTCCCTCTCTTCCTCCCACCCCTCCTCCTCGCCGTTCCTAT
GGCCTGGCTACGGCAGCAACGCCAATTCCCGCTGCTGCTTCGCCTAGTGC
CGCCATGTCCTATTTTGCTTCCTCCCCCGACGGCACCATCTCCATTGCAC
AATACCTCCTGCAGAAAAGCGGAGAGCGGGAGGGAGGGGGTAGTGGAAGA
AGAGGGACACAGCAAAGGCATTGTGGCGATGTGATGCGAGGACAGCGCGC
GAGGAAGGTTGAAAAGGTAGTAGAGAAGCGGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CACCAGCAGCAGCAGCAGCAGCACCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGAAGCGGCGGGGACTCAGTCTGCGGCAGCTCCAGAATGGTA
GAGGTCAGAGGGAAGAGCGAAGAGGGAGAGAGGAAGGGAGGGAGAGAAGA
GAGGATGCATTTGATTTTGCAGTACAGGAAGGGAAGAAGCTGACGATGGT
ATTTGTGCGAGAGGGAGAAGGGGGAGGGGGAAGGGGAGGGGGAGGGATGG
AGGGAGGGAGTGGTGTGGGGCGGACGAAGAGGGAGAGAGGGAAGGAGGGG
GGGGATATGTCTGTAAGAAGAGGGGGAAGACATAGAATTCTACAGAAATG
TGCACATGTGCGTTTGTGTGAATGTGTGAGTGTGTGTTTGTTCCTCTGTG
TGTGTGTGTGTGTGGCTCTGTCGGGATGAGAAGAGGTAGAGGGAAGGAGG
AATGTGCCATGAGAATGAAAAGAAGGGAATACAATGAAATGAACAGATGC
TGAGTGACATTTACATAAATCCTGTGTGTACATAAATTCTGTCTATATAC
ATATGAGAAAAAGGAGGGATAAAAGGACGCCAAAACAGGCAATGAAAACG
AGAGGGTGACGCAACAGCAAAAAGCAGGCAAGGCGG
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protein sequence of NO21G00810.1

>NO21G00810.1-protein ID=NO21G00810.1-protein|Name=NO21G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=893bp
MQYRYSSSSSSAYRGSSSSSSRIPAPAHRANASSSSSVSLDSILRYSCTA
TGGGRGSSSNISNNSSNNNNNGRVRGLPLPHSPYNRQQQEKQSQRSLYDH
FQQQQQLHRQLSTADFPAPAAPRPPPSHPPPYYSNEGGGGGGGGRGGGGG
DWTGLVSAAAAAPPPYTSLIIGNTPSQPSQHSYSQSQHTHLQQQQQQQRQ
EGGRGGKEGGVDDLVAAKTQQQMLDSLLTLIKDVHEVKRQLQEQQEEQEE
HNHHQAVPAKAFPPSPPPSPDRHQQRQQQHQQHQQHQQQKQRKEQEQHLT
DMPARLSKLAAELSSVQEQQRVAAATAAAAAAAAIEREQQVEEEVRILKV
KVEGMANEFRLLRLARDGKEEGGREGAVEGGGITAERGKEGGREGGVLHG
PYPPSAIKLFSRPPFPPPPLPVRVLHRRQQQQQQQQLDKKEEEEKEKEKV
LCAQIAEFDETKKEEKKKNEVSKEGEAEAEAEEEEEESPDLLAGRKHFSY
QHRDGDEEEEKEEEQEPNERVEGRNEKETRVVVQGEEEEEEMEETMTGIE
VVVDAHLAAAAIATENKNQHEKEDEEEVRNQGRILNVHLAAVAAAAAAAA
AAAEAAEAADAMVEDKEDQKQQKQQKQQLDVAPPPRPPSLPPTPPPRRSY
GLATAATPIPAAASPSAAMSYFASSPDGTISIAQYLLQKSGEREGGGSGR
RGTQQRHCGDVMRGQRARKVEKVVEKRQQQQQQQQQQQQQQQQQQQQQQQ
HQQQQQQHQQQQQQQQQQQQKRRGLSLRQLQNGRGQREERRGREEGRERR
EDAFDFAVQEGKKLTMVFVREGEGGGGRGGGGMEGGSGVGRTKRERGKEG
GDMSVRRGGRHRILQKCAHVRLCECVSVCLFLCVCVCVALSG*
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Synonyms
Publications