NO21G00730, NO21G00730 (gene) Nannochloropsis oceanica

Overview
NameNO21G00730
Unique NameNO21G00730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5915
Alignment locationchr21:246401..252315 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:246401..252315 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO21G00730 vs. NCBI_GenBank
Match: EWM22575.1 (hypothetical protein Naga_100893g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 92.4 bits (228), Expect = 1.500e-14
Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0
Query: 1642 PTPGAIARARELYVAILSLEERVAQAAGEEDFEEAEVLQEEMEWLKEEMARLGPIDVMHLIMDS 1706
            P+P A+ARAREL+VAILSLEERV QAA EED+E A  LQEE+E L+EEMA LGPIDV+HLIMDS
Sbjct:   99 PSPVAVARARELHVAILSLEERVGQAADEEDYEAAGALQEELEGLREEMAALGPIDVVHLIMDS 162          
The following BLAST results are available for this feature:
BLAST of NO21G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Position :
0
Zoom :
x 1
5001000150020002500300035004000450050005500SequenceEWM22575.1
Match NameE-valueIdentityDescription
EWM22575.11.500e-1476.56hypothetical protein Naga_100893g1, partial [Nanno... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004720NSK004720Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00730.1NO21G00730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100893g1gene7864Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00730.1NO21G00730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00730 ID=NO21G00730|Name=NO21G00730|organism=Nannochloropsis oceanica|type=gene|length=5915bp
ACAGGACGCATGGAAGATGCTCCCAGAAGTCTCAAGGAGGATGGCGAGGC
CGAGGAGGGGATGCCTTCGTCAGgtacgtctcatgtgctatttagaaggg
gagaaagggtgatgcgatgatgctgtgcttctccatcagagagctcaagt
gaacagaggaaatgtccccggttggcacatgtcaccacgtggatagggct
ttgctgagtacgcaatggactccggaatgaaagggaggagcaagacagtg
actgctcgctcgtttgtcgggggttggacgtctcgtcgtcctgccgccca
tttagggagagggaaggcgggcgccttttcctggctcgactccaacaaac
acgagtaccacaaatcgaatcctaaatccttcccttccacacgacccata
cacagCATTCAGCTTTCTTGCCTCTTCCTCCTCCTTGTCATCCTCCTTGC
CCAACAGCCGCATGGCAGAAACAGAAGCAGCAGTAGCCTCAGCAGCAGCA
ACGCCGCTTGCCGATGGAGGGAAAGATGGAGAAGGTTCAGCAAGCGGCAT
GTCTTCTTCTTCCCCTTCTTCTCCCTCCATATTATTGCCACCTAAGACGG
AGATGGCTGTCGAGAATGAGAAGAGGAACGGTAGTGCCACTACCGATGCA
TCCGCAGCTGCAGCAGTGCCAGCTGAGAGAGAGGAAGGAGCCTCCTCAAT
GCCTCTCTCCGCGTTCAGTTTCGTTTCCACCTATTCGCCCTCTGTGGCAG
AATTACCAGCAGTGGTATCCGCACCGTTAGAAAAAGAAGAGGAGGAGAAG
AAGGCCAAGGGAGAGAGCACGTCTTCCTTCTCCGCCTCTGTGTCTGCGTC
CTCCTCCCCTTCGTCTTCCTTCTCCTCGCCTACCACGAAACGATCGCCAT
CGCCGACACCACCCAAGACAGCTACAGCACCAGCGGCAGGAAATGGAGCA
GGAGTGAAAGAGACCGCATTAGCACCATCACTAGCAGCAGTGGAAGCAAC
ACCAGCTCCAACACCAGGAGGAGGAGGAGGAGCGACAGACGCATCCGTTA
TCGCGGCTTACGCGTACCTACAGGGCATGGACTCTCCAGTGACTGCTGCT
TATTCTTCGGCAGGGAGGGAGGAAGGGCTCGGATTGACTTCCCCTGTTGC
TGCTTCCTCTTTATTGCCCAGAAAACGGGCAGGGAGGGAGGGAGGGCTGG
AGGGTGAGGAATCAAGACCTTTAGGTTCTGCTTCTCCTTTTCTTCCTCCT
CCGTCCTTGTCTGAAGCGTCATTGCCGCCGGGTAGCAGCAGCAGCAGTGG
TGGTGGTGCGTCTTCTTCCTCCTCCTCAAGCACGACGCTGGAGGTGCCCT
CAACGATATTGACCAGCACCACCACAACCAAGACAAAGAGAGAAGATCGG
GCACCAACAGCACCAACAGCACCAACAGCACCAACAGCACCAACAGCAAC
AGCAGCAGCAGCAGCAACAACTACAGCAGCACCAGCAGCAACAACTACAA
CAGCAACAGGGCCATCCTCTTCAGCATTTTCTTTCATGGCTCCAACAGCA
GCTGTCGAGGGAGGGAGGGAGGGCACAAGCAACACCTGCACCAGCACCAG
GAGCAACAGCGGCAGCAGTAGTGGTGGTGATACACCTACTTCTCTTCCTC
CTCCGCTCCCTCCTTCTCATATCACGACAACCACCACCAGCCACACCTTA
AAGGAGGGGGGGGAAGGGAGGGAGGAAAGGGGGGCGGGAGCTCTTCTTAG
CTTCGAATCTTATTCCTCCTCTCGATCCATCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCTTCGTCTTCTACTTTTTCTCCCGTAGTAAGGGGAGGA
AACAGCAGCGGAAGCATCACCACTCGCCCTCCCCCTCCTCCCCCTCCTCG
ATCCGACAGCAGTGGTGGTATTCTCGGGGGGGCTGCCTCTCCCTTGACGT
TCTCTCTGACCAGCAGCAGCAGAGGCACGATAAAAAAGAAGAAAAAAGCA
CCTGTTAAACTTGTTGGATACGCTCGCGGAGACGGAGAGGGAGCGAGCGA
GGGAGGAAAAATGGACGAGGTGATGGAGAGGAGTGGAGGCAGTAGTAGCA
CTGTGTCTTCAACGGCATCGACGGGAGGGAGGGAGGGAGGGAGGGAAGGA
GGAAGTGGAGGAGCGCAAGGAGTACCTTCATCAACTGCTACTGCCATTGG
CCCTCCTTCTCGCTCCCTTCCTCCCTCCTCAACCTCCACCCCCTCCTCCT
CTTCCTCTACCTTCAGATTCGTCAATGCTGCTTTTGCTCCCGCTCCTCCT
CTTCCTCCCCCTTCCTCCTCCACCAAAGCAGCCCCCCCGCCCACCCCCAC
CCCTCGCACCTACAGCACCCACAACAACAACGACAATTACAGGCTCCCTG
TCCACGCGCCGCGGGCACCAACAGCACCAACAGAGGCAATGGAGCTGGTG
TTGGACGTGGGGCAGCAGCCGCATCCCCAGCAGCACCAGTCTCAACCACC
GCAGGAGGCATTCTCTCCTTCTTCGGATTTGGCGCCCCCCCCCCTCCTAC
TCCTCCTCCCCCCCCCCCCCCCCCCGACACTACCCTCTTCACGGACAGGA
CGATCCATCTCTTCCGATGCTGCTGCTTCTGCTGCTGCTCCAACAGCAAG
AGAGCACCGACGACCAACTCCCGCCACTTCACCTTCCCTCCCTTCCTCCC
TTCCTCCCTCCCTCCCTCCCTCCCTGTTGCGGCCCACTGACAACGTAAAG
GTCTGGACTCGCAGCAGCAGCGGCAGCAGCGGCAGCAGCGGCAGCAGCAG
CAGCAGCAGCAGTGACGTCATTCCCGCACATCCCGCCTCCTCCTCCCCCT
CCACCGCCACCTCGTCCCCTTCCTCTTCACCTGACGCGGCTGGCTCTCGC
CCTCCTCCTGCTCCTCCTTCCCCCCCTCCACCTTCCTTCCGAAGCCACAG
CAACGAGAGAAGCAGCAGTAGTAGCAACAGTAGCGCTTTATTCAAGCCCT
TAGGAGGAGGAGGAGGAAGAGGAGCAGAAAGACGAGAAGGAAAAGAAAAA
GGAGAAGCTGGAGGAGGAAAAAGTACAAGACTCCAACATACGCCTTCTCT
CTCCTTCATTAGGCCCTCCCTCTCTCCCTCCGCCTCCTCCTCCGCCTCTT
TTTCCTCCTCTCCTTTCCGCAAATCTCCACAAAGCGAGACGAGGCCGGGA
GGGCGGGAGGAGGAGGAGGGGGAGGAGGAGAAGGAGGAAAGCACCGTCCA
CGCACTTCTTCAAGGAGTGAAGGAGGGAGAGAAGGAGGGAAGGGAAGAGG
ACATTCATGCCAGTCTCAAGAGTTTCCAACAGGAGGTCACTTCCTTGTGT
TTCACCCAACAAGAAATTAGGCGGCGCAAAGCTCGAATTTTGAATGAACT
TCGTTTGCTTGAGGAGGAGGAGGAGGGCGGGAGGGAGGAAGAGCTCAGGT
ATGAAGGGCTGCAGGCACGGTTGGCTGAGAAGGAAGATTTTGAGAAGGCA
GAGGCGTTACAGGATGTTCTTGATGAGTTGGGAAGGAGGAGGGAGGGGAG
GAGGAGGAGGAGGCAGGAATTGGAGGAAGAGGGGAATGAGGGGGGCAGGG
AGGGGGAGAGGATTGCGAGGAGGATGGGGAGAAGGGTGGGGGAGATGGTG
GGCTTGTTGGAGGGGTGGGTGAAGAGGAGGGGGGAGGAGATGGAGGGATG
GAGGGGAAAGGTAGATGGAGGGATGGAAGAGGAAGGGAGAAGGTTAACGG
AGGAGGAGGAGCGAGTGCGCGGGGAGAAGCAACGTATGGAGGAGGAGGAG
AGGAGAGTGGGGGAGGAGGAGGGGAGGGTGGAGGGGTTGATTGAGGAAGG
GACGCGAGGGCTGCAGCAGCAGCAGCAGTGCCTGGAGCAGGACCTCGAGA
AAATTGACAAAGAAATTGCGGCGTTGGAAGAGGCATTGAGAAGACAGAAG
GGAGAAAGGGAGAGGGTGCTACAACAACTTCGAGTGACGGAGGGGGGGGT
AGAGGAGGTGAGAGGAAGATATGGGAAAGAGTGGAGTTTAATCCAGGAGA
AAAAACGGGCGTTGGCGATGGCGAGGGAGGGGGTGGGGGAGGAGGAGAGA
GGGCTGAGGGAGAGAAGAGGAATGCTAGAAGAGGCGATGGAGAAGGCACA
GTTGGAGGAGGAGAGGAGGAGGAAGGTGATGCAGCAGATGATGTGTGAAC
TAACGGTTGCTTCAACGCTTGCAAGGTTGTTCCCTGAGAAAGAGGGTGGG
GGGGAAAGAAAGGAGGAGGGAAGGAGGGAGGGAGGGGTGGAGGAGGGGGG
CTTGGACCAGTATCAGGCGGCGGTGAGGGTGGAGGAGGAGAGGAGGGAGG
AGGGAAGGAGGGAGGCGGAAAGATTGGAGAAAGAATTGAGCAGCTTGAAA
GAGGAGATGGAGGAGACTGACCAGCGTCTCCCGGATTTGGAGGTGGCAAA
ACGTGAAGCAGCAGCCGCGAAAAATTACAAGGAGGCCGCCGCCCGCATGA
AGGAGATCAAATGCCTCCAGGAGAGGAAAGGCAGGATCCAAAACCTCCTC
CATACCCATCACCTTCATCTCCAGGACCTCCGGCTCATCCTGCACCAGGA
AGAAGCGAATCTGACTACGGCCCTTTCCGCCCTCCATCAGTTCCAACAAC
AGCAACAACACCAACGGCTGTCTTCGTTAGAGTGCCAACGGAAAGCGCTC
GGGAAGTCTAGGACTAAAATAAGCGCCCTCCCATGCACCATCAAGATAGC
CTTACAGACCAGTGCAGTCATCCTCCTTCAGGCAGAAATGGAGGCTGTTG
ATGGGGAGATGGCGACGCTCAGGAAAAAGCTCAGTCTCCCTCCTGTGGCA
AAATATGATGATGATGATGCACAAGAAGAAGAAGAAGAACAAGAGGAGGG
GGAGGAAGAGGAGGAGGCGGGGGCACAGGTAGTAAGTCCGAGTAGGGAGG
AGGAGGAGAGCGCGGGGAAGGAGGAGATGCCGCAGCGGCGCTTTATTTCT
GCTAGCACAGGTCCTCGTGGCGCTCGCAGTCGTAGCAGCAGGAGTAAACT
TTCTTTTAATTCGTTGTCTTTGGCGCCAACTGCCGGGATACAGTGTGAGG
AGACAGTAGACGAGCAGCAGCAGCAGGAGGAGAAGAAGAGAAGAGAGAAA
TTTGCAGTTGCAGCTGCCACAGTTGTCGAGGATGAAGAGGAGGACGAGGA
AGAAATCACGTCTCTCACTGCCGCTGCTGCTTCTGCTGCTCCTACTGCTG
CCTCTCCTGGAGATCCTACTCCTGGAGCTATCGCCCGTGCCCGAGAATTG
TACGTTGCGATTTTATCGTTGGAGGAGAGAGTCGCGCAGGCAGCCGGGGA
GGAGGACTTTGAGGAAGCAGAGGTGCTGCAGGAGGAAATGGAGTGGTTGA
AGGAAGAAATGGCACGTTTAGGTCCCATAGATGTGATGCATTTGATTATG
GACTCGGAGGAGGAGGAGGAGGAGGAGAAGGAGGGGGAGGAGGGGGAGGA
GGGGGAGGAGGAGGAGGAGGAGGAGGAGGACGAAGAGGAGAAGGAGGGCA
GGGAAGAAGGGGTGTAGAAGGAGGAGAGATTGACCGTATTTCCACATACT
TAGTGTATGTATGATTGAACAAAAGGCTGTCAAGGAAATAAAATACGTCT
TAGTGCATAGTCCTCATCTCCTCTTATAGGAAAGCCTCTTAGAGGAAAAT
CATGAAGATAATTTTTGAAATGTAGGAACAAGGGTCCGACCTATTTTCCA
TTGGATCACCATGTATGTGATGCACGGGTCGGGCCAAGGCGACACGTACC
GAGAGATGAAACGCAAGAAGTTATTGTTTCAACGCATATAACGAAGAAAA
GATGGAGCAGGCTCTGCACCGTAGGCACAGGTGCGGCATGGCCATGCCAC
CGGCATAATTCAAAG
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protein sequence of NO21G00730.1

>NO21G00730.1-protein ID=NO21G00730.1-protein|Name=NO21G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1742bp
MEDAPRSLKEDGEAEEGMPSSAFSFLASSSSLSSSLPNSRMAETEAAVAS
AAATPLADGGKDGEGSASGMSSSSPSSPSILLPPKTEMAVENEKRNGSAT
TDASAAAAVPAEREEGASSMPLSAFSFVSTYSPSVAELPAVVSAPLEKEE
EEKKAKGESTSSFSASVSASSSPSSSFSSPTTKRSPSPTPPKTATAPAAG
NGAGVKETALAPSLAAVEATPAPTPGGGGGATDASVIAAYAYLQGMDSPV
TAAYSSAGREEGLGLTSPVAASSLLPRKRAGREGGLEGEESRPLGSASPF
LPPPSLSEASLPPGSSSSSGGGASSSSSSSTTLEVPSTILTSTTTTKTKR
EDRAPTAPTAPTAPTAPTATAAAAATTTAAPAATTTTATGPSSSAFSFMA
PTAAVEGGREGTSNTCTSTRSNSGSSSGGDTPTSLPPPLPPSHITTTTTS
HTLKEGGEGREERGAGALLSFESYSSSRSISSSSSSSSSSSSSSTFSPVV
RGGNSSGSITTRPPPPPPPRSDSSGGILGGAASPLTFSLTSSSRGTIKKK
KKAPVKLVGYARGDGEGASEGGKMDEVMERSGGSSSTVSSTASTGGREGG
REGGSGGAQGVPSSTATAIGPPSRSLPPSSTSTPSSSSSTFRFVNAAFAP
APPLPPPSSSTKAAPPPTPTPRTYSTHNNNDNYRLPVHAPRAPTAPTEAM
ELVLDVGQQPHPQQHQSQPPQEAFSPSSDLAPPPLLLLLPPPPPPTLPSS
RTGRSISSDAAASAAAPTAREHRRPTPATSPSLPSSLPPSLPPSLLRPTD
NVKVWTRSSSGSSGSSGSSSSSSSDVIPAHPASSSPSTATSSPSSSPDAA
GSRPPPAPPSPPPPSFRSHSNERSSSSSNSSALFKPLGGGGGRGAERREG
KEKGEAGGGKSTRLQHTPSLSFIRPSLSPSASSSASFSSSPFRKSPQSET
RPGGREEEEGEEEKEESTVHALLQGVKEGEKEGREEDIHASLKSFQQEVT
SLCFTQQEIRRRKARILNELRLLEEEEEGGREEELRYEGLQARLAEKEDF
EKAEALQDVLDELGRRREGRRRRRQELEEEGNEGGREGERIARRMGRRVG
EMVGLLEGWVKRRGEEMEGWRGKVDGGMEEEGRRLTEEEERVRGEKQRME
EEERRVGEEEGRVEGLIEEGTRGLQQQQQCLEQDLEKIDKEIAALEEALR
RQKGERERVLQQLRVTEGGVEEVRGRYGKEWSLIQEKKRALAMAREGVGE
EERGLRERRGMLEEAMEKAQLEEERRRKVMQQMMCELTVASTLARLFPEK
EGGGERKEEGRREGGVEEGGLDQYQAAVRVEEERREEGRREAERLEKELS
SLKEEMEETDQRLPDLEVAKREAAAAKNYKEAAARMKEIKCLQERKGRIQ
NLLHTHHLHLQDLRLILHQEEANLTTALSALHQFQQQQQHQRLSSLECQR
KALGKSRTKISALPCTIKIALQTSAVILLQAEMEAVDGEMATLRKKLSLP
PVAKYDDDDAQEEEEEQEEGEEEEEAGAQVVSPSREEEESAGKEEMPQRR
FISASTGPRGARSRSSRSKLSFNSLSLAPTAGIQCEETVDEQQQQEEKKR
REKFAVAAATVVEDEEEDEEEITSLTAAAASAAPTAASPGDPTPGAIARA
RELYVAILSLEERVAQAAGEEDFEEAEVLQEEMEWLKEEMARLGPIDVMH
LIMDSEEEEEEEKEGEEGEEGEEEEEEEEDEEEKEGREEGV*
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Synonyms
Publications