NO21G00720, NO21G00720 (gene) Nannochloropsis oceanica

Overview
NameNO21G00720
Unique NameNO21G00720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1491
Alignment locationchr21:244267..245757 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:244267..245757 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00720.1NO21G00720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00720.1NO21G00720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00720 ID=NO21G00720|Name=NO21G00720|organism=Nannochloropsis oceanica|type=gene|length=1491bp
ATGTCCATGACTAAGAACTTCGTCACACTTGTCCTCCTCATCTTAGTGTT
GGCGTGTGCTATTCGCCGAACCGCGTGCACCCGTTTTGAAGTGTCCACCA
TCTCTCTTCAAGCCGCAAAGCATCTCAAGGTTCCCCTTAAATATGCAATG
GAAATGCCCATTGACAATTTTCTCCAGCGTATTCATGCCTGCCTGACTAT
CCTAGGTTGGCTTTTACAGACGTGGCTCGAGTCCGTACTTGAAATCTTCC
GGTGGGTTTTCCTCCTCGTCTGCATTTCGACCTTCAGTGGATTTTTCTGC
TGGGGGCTGGACACCCTTTGGTGCTATCACGGCGGCTTCAAGAGCAATAT
CTCTTTTTACAGGGCCCCGAAGACGTCAACGACCACCGTGGACTCGAGTC
CTGTATTCATGCCGCTCCCAGCGACCACCAAATCATCAAAACAGCCGATA
TCTGCAGGTAAAATTACACCCTACGCCCGTATTAGTATTGTCCTGGCGAT
GCCTCTCTTCGTTGTCCTGGGATTCCTTAACATAGGTGTCGTGGGTGCGA
TTGCTTTTCTCAGAGTCGTTCAGTACGGCATTCTCTTGTTGTGGAAGAGC
CTGAGTGCCATGAAAGCGCATGTCGCTCAACGAGTCGAATATTTTTACAC
CTCTCTCCTAATTCTGTATGCGATTACGGTTGCCCTGATTTTCGGGAGCT
GCAGCAGCATCAGCATCACCTCCACGAAACGCCGCATGACCTTGAAAATC
AAACCAACCCCAACAGAGACAAAGAAGGGGAGACGATTTGCCAAGAAGGC
ACGCCTGCACAAATGTACTCACAACTATCGTCCTACCCTTATTTTCTCTT
CCACCACCTCTGGTGCCACCACGCAAACGGATATCAAGGAGGTCTTTCGT
CCAATCCTCACTACCACGATTGAGACGGGAACGTTGACAAGCATCACCAC
GGGTAGCAACACAGCCCCGCTCCTCCATATCCCCACGATCAATGGTACGG
TAGCCAATTTATCTTTTTCTTCTTCGATGCTCGGTTGCGGTAGTAGCAGT
AGCCACAACAAAAGCAGCAGCAACAGAGGCAGCAACAACGGCAACAGCAG
CAGCACCACCGGCAACACCACCACCACGACCGAGGCGGTGCGGATCTGTT
TGGAGACGATCACTCGGGCGGCACATGGGTCATTTATAGATCAAATTGAT
GTCGTGGAGGAGGAGGAGAGCAAGAGCGACGACCACATCTCGGCTGTATT
GCCTGTCGGCCGCTCAGTCGTCGATTCCGCCATTGCGTCTCAGCGCAAGG
TCAACAAGCTGATGAACCTCAACAACAGAACGCCGAGAAGGCGACAAGCA
CGACAGTCAAGAAAAGAAAGACAAAAATGCATGTAGAGTACGGAAAGACG
AACCAACTGCCCAGAAAAAAGAGAGACTCGATAGTAAAGAAAAGGGAGTG
TGACCGTCACCTTAAAGAACGTAGGGATAACAAGACTGCGA
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protein sequence of NO21G00720.1

>NO21G00720.1-protein ID=NO21G00720.1-protein|Name=NO21G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MSMTKNFVTLVLLILVLACAIRRTACTRFEVSTISLQAAKHLKVPLKYAM
EMPIDNFLQRIHACLTILGWLLQTWLESVLEIFRWVFLLVCISTFSGFFC
WGLDTLWCYHGGFKSNISFYRAPKTSTTTVDSSPVFMPLPATTKSSKQPI
SAGKITPYARISIVLAMPLFVVLGFLNIGVVGAIAFLRVVQYGILLLWKS
LSAMKAHVAQRVEYFYTSLLILYAITVALIFGSCSSISITSTKRRMTLKI
KPTPTETKKGRRFAKKARLHKCTHNYRPTLIFSSTTSGATTQTDIKEVFR
PILTTTIETGTLTSITTGSNTAPLLHIPTINGTVANLSFSSSMLGCGSSS
SHNKSSSNRGSNNGNSSSTTGNTTTTTEAVRICLETITRAAHGSFIDQID
VVEEEESKSDDHISAVLPVGRSVVDSAIASQRKVNKLMNLNNRTPRRRQA
RQSRKERQKCM*
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Synonyms
Publications