NO21G00670, NO21G00670 (gene) Nannochloropsis oceanica

Overview
NameNO21G00670
Unique NameNO21G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2341
Alignment locationchr21:227372..229712 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:227372..229712 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000600ROK
Homology
BLAST of NO21G00670 vs. NCBI_GenBank
Match: CBJ27916.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 345.5 bits (885), Expect = 2.600e-91
Identity = 172/301 (57.14%), Postives = 216/301 (71.76%), Query Frame = 0
Query:    1 MPTYLGIEGGGTTWKVAIAQDKPDNITESIRFDTT-SPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPILFDTDVNAPALAEFTFHASSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKGNDLY---KDIEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALDDKG 298
            M  Y G+EGGGTTW+VAIA   P NITES  F T    +E    IK+W+  + YD +GI TFGPVDP+  SPTYG+IT+TPKPGW  VDVVG L+DGS P  FDTDVNAPALAEF + A    +SS AYITVGTGVGVGLV+NG+ VHGL+HPE GH+   R+P D   G D       +EGL++T+A+A++K   R  L  + D D VW++ AH+L  LCA+LVL+VS ERIV+SGGV+NRT+LY K+R  T E+L GYI HP +T   +D YITPS +G NAG+VG+LTLA +A ++ G
Sbjct:    1 MVIYAGVEGGGTTWRVAIADGHPTNITESKSFVTVQDSKEQLKAIKDWLSTRKYDCLGIGTFGPVDPREGSPTYGYITSTPKPGWNMVDVVGYLSDGSVPCKFDTDVNAPALAEFMWGAKKEGESSCAYITVGTGVGVGLVVNGQAVHGLMHPEAGHLCLKRMPGDDFPGVDSVFGGASVEGLASTVALAARKNCAREDLPGVPDSDPVWEATAHSLAGLCASLVLVVSPERIVLSGGVMNRTLLYDKVRKWTRELLNGYIDHPAVTTDAVDDYITPSSFGQNAGMVGSLTLAHIAYEEAG 301          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_001749119.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85925.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 297.4 bits (760), Expect = 8.200e-77
Identity = 154/295 (52.20%), Postives = 202/295 (68.47%), Query Frame = 0
Query:    4 YLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPILFDTDVNAPALAEF-TFHASSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKG-NDLYKD-IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYI-VHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALD 295
            Y  +EGGGT+W+ AIA  +PDNI E   F T  PE T   I++W+  + YDS+GI TFGP+ P  + P YG IT+TPKP WKN  VV  L     P LFDTDVNAPA AEF   HA++P  +S+AYITVGTGVG+GLVING+ VHGL+HPEGGH+   R P +   G    +KD +EGL +  A+A+++G+ +  L  + DDD +WD+ A AL + CA L+L VS + IVISGGV+ R  L+ K+RA+TLE+L GY+ V  LL     ++ I PS WG+NAGI+GAL L+K AL+
Sbjct:   29 YAAVEGGGTSWRAAIAVGRPDNIVERTTFKTEKPEVTLVAIRKWLDARKYDSLGIGTFGPIQPDRSHPQYGCITSTPKPFWKNAKVVQTLCPSGIPHLFDTDVNAPAYAEFLALHATNPGLTSLAYITVGTGVGIGLVINGQPVHGLLHPEGGHMLIRRQPGETFAGVCPFHKDCVEGLVSAPALAARRGVSQEELANLDDDDFIWDAAADALANACANLLLTVSPQAIVISGGVMLRACLFDKVRARTLELLAGYVDVEQLLQRP--EEVIRPSTWGNNAGIMGALHLSKTALE 321          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_009035513.1 (hypothetical protein AURANDRAFT_69748 [Aureococcus anophagefferens] >EGB09445.1 hypothetical protein AURANDRAFT_69748 [Aureococcus anophagefferens])

HSP 1 Score: 283.9 bits (725), Expect = 9.400e-73
Identity = 154/302 (50.99%), Postives = 195/302 (64.57%), Query Frame = 0
Query:    1 MPTYLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDG-SKPILFDTDVNAPALAEFTFHA-SSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKGNDLYKDIEGLSNTIAIASK-------KGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVAL 294
            M T   +EGGGTT+  AIA+D   NI + + F TT+PEET GK +EW+  +++D++GIATFGPVDP   S TYGHIT TPK  W++ DVVGALT+G + P  FDTDVNAPALAE+          SSVAY TVGTG+GVGLV+NG  VHGL+HPE GH+   RL  D  +G++   D        A+A+                  + DDD VWD+ AH L ++CA LVL VS +RIV+SGGV+ R  L+PKIRAK +++L GYI  P L        +  S WG+NAGIVGALTLA+ AL
Sbjct:    1 MVTLAAVEGGGTTFVCAIAKDTASNIVDRVIFPTTTPEETLGKCREWLLARSFDALGIATFGPVDPTPGSKTYGHITATPKKAWRHSDVVGALTEGLNVPFGFDTDVNAPALAEYRASVRDGEALSSVAYATVGTGIGVGLVVNGGCVHGLLHPEAGHICVPRLAGDAYEGHNPSLDCANWCEVEAMAASGXXXXXXXXXXXXXXXXLPDDDGVWDAAAHYLAAMCANLVLTVSPQRIVLSGGVMLRASLFPKIRAKMVKMLNGYI--PPLDAQAACSVVVKSRWGNNAGIVGALTLAEDAL 300          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: KOO28166.1 (rok family protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 277.7 bits (709), Expect = 6.700e-71
Identity = 156/341 (45.75%), Postives = 214/341 (62.76%), Query Frame = 0
Query:    1 MPTYLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGAL--TDGSKPILFDTDVNAPALAEFTFHASSPTQSSVA------YITVGTGVGVGLVINGKTVHGLVHPEGGHV-PPFRLPSDGIKG---NDLYKDI--EGLSNTIAIASKKG-IDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYI-VHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALDDKGKNSVLGKARAYVCKHGAAVFLGVVLGAA 326
            M     +EGGGTT+ VAIA D P  + E   F TT+P++T  K  EW+  ++YD++G+A FGP+D K  SPT+G+ITTTPKPGW+  +++G L     + P LFDTDVNAPA AE+    +      VA      YITVGTG+GVGLVIN K VHG++HPEGGH+  P R    G +G   ND +  +  E +  ++A+  +   +  H LK + DDD  WD+ AH LG+LCA +VL+ S E+IV+SGGV+ RT L+PK+RA+   +L GYI    +LTP  I  Y+TPS WG++AG+VGALTLA  AL+ +         RA     G +   GV++ A+
Sbjct:    1 MARLAAVEGGGTTFVVAIASD-PTTVLERAEFPTTTPKDTLRKCCEWLASRHYDALGVACFGPLDLKPDSPTFGYITTTPKPGWQQTNILGPLKAVRPAAPTLFDTDVNAPAAAEYEHMVAEARARGVAPPTSCCYITVGTGIGVGLVINEKPVHGMMHPEGGHMCVPRRAADAGFEGPNPNDTFGGLCAENMGCSVALVKRGALVGVHALKDLSDDDPQWDACAHYLGALCANVVLLASPEKIVMSGGVMLRTSLFPKVRARMQAMLNGYIQCEQVLTPEGIASYVTPSTWGNDAGMVGALTLAAKALEQQ---------RATEKSAGKSAGRGVIMAAS 331          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_003283222.1 (hypothetical protein DICPUDRAFT_96285 [Dictyostelium purpureum] >EGC40286.1 hypothetical protein DICPUDRAFT_96285 [Dictyostelium purpureum])

HSP 1 Score: 277.3 bits (708), Expect = 8.800e-71
Identity = 155/297 (52.19%), Postives = 194/297 (65.32%), Query Frame = 0
Query:    4 YLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDK-NYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPILFDTDVNAPALAEFTFH--ASSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKGN-DLYKD-IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALDD 296
            Y GIE GGT + +AIA  KP NI + I   TTS EET  K+ EW K K   +S+G+A+FGP+D   TSPTYG+ITTTPKP W N D++G   D   P  FDTDVN  A++E TFH      + SS  YITVGTGVGVG+V+NGK +HGLVHPEGGH     L  D  +G    +K+ IEGL +T AI+ + GI    L  I DDD VW ++ H LG LCA +   +S E IV+ GGVLNR+ILY  +R +T++IL  YI    LTP  I+QYI  S +G NAG+VG+L LA+ AL D
Sbjct:    8 YGGIEAGGTGFGLAIAVGKPSNIVDKISIPTTSVEETKEKVLEWFKSKGEINSLGLASFGPIDLDETSPTYGYITTTPKPNWGNTDILGWFKDFKCPKGFDTDVNGAAISE-TFHNLHKRGSVSSCVYITVGTGVGVGVVVNGKPIHGLVHPEGGHTFARILNDDKFEGTCPFHKNCIEGLVSTGAISKRLGITADKLSQIPDDDPVWRTIGHYLGQLCANITCFISPEVIVLGGGVLNRSILYEIVREETIKILNSYIKTKYLTPEHINQYIVQSPFGSNAGLVGSLELARRALID 303          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_020431622.1 (hypothetical protein PPL_07552 [Heterostelium album PN500] >EFA79501.1 hypothetical protein PPL_07552 [Heterostelium album PN500])

HSP 1 Score: 269.6 bits (688), Expect = 1.800e-68
Identity = 144/293 (49.15%), Postives = 186/293 (63.48%), Query Frame = 0
Query:    4 YLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPILFDTDVNAPALAEFTFHA--SSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKGNDLYKD--IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVA 293
            Y G+E GGT + +AIA   PDNI + +   TT+P+ET   + EW++ K + S+G+A+FGP+D    S T+G ITTTPKP W N +++G   +   P  FDTDVN  A++E TFH        SS AYITVGTGVGVG+V N K +HGLVHPEGGH+    L  D  +G   +    IEGL +T AI+ + G+    L  I DDD VW  V H L  LCAT+  ++S + IV+ GGVLNRTILYP IR + L+IL GYI    LT   + +YI  S +G NAGIVGAL LA+ A
Sbjct:    8 YAGVEAGGTGFTLAIASGTPDNIVDRVSIPTTTPDETKANVLEWLRGKKFSSIGVASFGPIDLDTKSSTFGFITTTPKPMWGNTNILGWFDEFQCPKKFDTDVNGAAISE-TFHGRHERGAISSCAYITVGTGVGVGVVANEKPIHGLVHPEGGHIFTKLLEDDQFQGTCPFHGNCIEGLVSTGAISKRLGVTADKLSVIPDDDPVWQIVGHYLAELCATITCIMSPQVIVLGGGVLNRTILYPIIRDELLKILNGYIKSEFLTKENVHKYIVQSPFGSNAGIVGALELARRA 299          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_004361085.1 (hypothetical protein DFA_05366 [Cavenderia fasciculata] >EGG23234.1 hypothetical protein DFA_05366 [Cavenderia fasciculata])

HSP 1 Score: 266.2 bits (679), Expect = 2.000e-67
Identity = 143/289 (49.48%), Postives = 184/289 (63.67%), Query Frame = 0
Query:    6 GIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPILFDTDVNAPALAE--FTFHASSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKGNDLYKD--IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAK 291
            G+E GGT   +AIA+  P NI ES    TT+P+ET  K+ EW++ K +DS+G+A+FGP+D    S TYG+ITTTPKP W+N +++G   +   P  FDTD N  A++E     H   P  SS  YITVGTGVG+G+V+  K+VHGLVHPEGGH     LP D   G   +    IEGL +T AIA + G+    L  I DDD VW  V H L  LCA L+L+ S E IV+ GGV+NR++L+P I  + L+IL GYI  P LT  LIDQYI  S +   +GIVGAL LA+
Sbjct:    9 GVEAGGTGITIAIAKGVPSNIIESTYIPTTAPDETKEKVVEWLRQKKFDSLGVASFGPIDLDRNSKTYGYITTTPKPNWENTNILGWFDEFDVPKDFDTDCNGAAISECFHNQHKRGPV-SSCVYITVGTGVGIGVVVGEKSVHGLVHPEGGHSFARLLPDDQFPGTCPFHGNCIEGLVSTGAIAKRLGVSPDKLAMIPDDDPVWSIVGHYLAQLCANLILISSPEIIVLGGGVMNRSVLFPIIGTQVLKILNGYIKSPYLTEELIDQYIVLSPFEHRSGIVGALELAR 296          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_012753259.1 (hypothetical protein SAMD00019534_066930, partial [Acytostelium subglobosum LB1] >GAM23518.1 hypothetical protein SAMD00019534_066930, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 266.2 bits (679), Expect = 2.000e-67
Identity = 142/294 (48.30%), Postives = 185/294 (62.93%), Query Frame = 0
Query:    3 TYLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPILFDTDVNAPALAEFTFHA--SSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSDGIKGNDLYKD--IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVA 293
            ++ G+E GGT++ VAIA   P NI + +   TT+P+ET   +  W++ K + S+G+A+FGPVD    S TYG+ITTTPKPGW N +++G   + + P  FDTDVN  A++E  FH   +    +S AYITVGTGVGVG+V+N + VHGLVHPEGGHV    L  D   G   +    IEGL +T AI+ + G+    L  I DDD VW  V H L  LCA L  ++S   IV+ GGVLNR  LYP +R +TL+IL GYI    LT   ID+YI  S +G  AGIVGA+ L K A
Sbjct:    6 SFAGVEAGGTSFTVAIATGTPGNIVDRVSIPTTTPDETRDNVLAWLRQKKFSSLGVASFGPVDLDRDSSTYGYITTTPKPGWANTNILGWFNEFTCPKAFDTDVNGAAISE-AFHGQHARGNITSCAYITVGTGVGVGVVVNSQAVHGLVHPEGGHVYTKLLDDDHFAGTCPFHGNCIEGLVSTGAISKRLGVTADKLNLIPDDDPVWRIVGHYLAQLCANLTCIISPHVIVLGGGVLNRETLYPIVREETLKILNGYIKSDYLTKENIDKYIVKSPYGGQAGIVGAIELGKRA 298          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: KYQ92109.1 (hypothetical protein DLAC_06949 [Tieghemostelium lacteum])

HSP 1 Score: 260.8 bits (665), Expect = 8.500e-66
Identity = 142/298 (47.65%), Postives = 195/298 (65.44%), Query Frame = 0
Query:    4 YLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDK-NYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTD--GSKPILFDTDVNAPALAEFTFHASSPTQS--SVAYITVGTGVGVGLVINGKTVHGLVHPEGGH-VPPFRLPSDGIKGNDLYKD--IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVAL 294
            Y GIE GGT + +AIA  +P NITE I   TT+P+ET  ++ +W K++    S GIA+FGPVD    SPTYG+ITTTPKPGW+N +++G + +   + P+ FDTDVN  A++E T H      +  S AYITVGTG+GVG+VIN + VHGLVHPEGGH +   +   +G +G   +    +EGL +T AI+ +  ++   + T+ D D VW  +AH L  LCA L++ +S + IV+ GGVLNR  LYP IR +TL IL GYI  P LTP  I +YI  S +  +AG+VG+L LA++ L
Sbjct:    7 YGGIEAGGTGFSLAIAIGEPSNITERISVPTTTPQETKDRVLQWFKERGEIHSFGIASFGPVDLDKLSPTYGYITTTPKPGWQNTNILGWIKEQYPNTPVGFDTDVNGAAISE-TKHGKHERGAIDSCAYITVGTGIGVGVVINNQPVHGLVHPEGGHTLVKMQKGDEGFQGTCPFHGNCVEGLVSTGAISKRVNLNADQIPTLSDQDPVWKVIAHYLAELCANLIMSLSPKIIVLGGGVLNRECLYPLIRQETLTILNGYIKSPYLTPENIHKYIVQSPYKSSAGLVGSLELARIEL 303          
BLAST of NO21G00670 vs. NCBI_GenBank
Match: XP_009533846.1 (hypothetical protein PHYSODRAFT_520447 [Phytophthora sojae] >EGZ11101.1 hypothetical protein PHYSODRAFT_520447 [Phytophthora sojae])

HSP 1 Score: 254.6 bits (649), Expect = 6.100e-64
Identity = 138/303 (45.54%), Postives = 186/303 (61.39%), Query Frame = 0
Query:    1 MPTYLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKDKNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDG--SKPILFDTDVNAPALAEFTFHASSPTQSSVAYITVGTGVGVGLVINGKTVHGLVHPEGGHVPPFRLPSD---GIKGNDLYKD--IEGLSNTIAIASKKGIDRHLLKTIGDDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTLEILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALDDK 297
            MP + G+E GGTTW  AIA+D P+NI E    DTT+P+ET G +  W+K++ +DS+GIA+FGPVD    SPTYG+IT+TPKP W N DVVG         PI FDTDVNAPAL E  +       S+V YITVGTGVGVG+  NG  +HG +HPEGGH+   + P D   G KG   +    IEG+  + +IA++ G+DR  L  I DDD VWD++AH L +LC  +  + S + IVI GG+  R  L+  IR K +  +  Y   P      +++YI  S +    G+V +L LA++ L+ K
Sbjct:    1 MPRFAGVEVGGTTWVAAIAEDHPENILEKFEVDTTTPDETMGAVVAWLKERKFDSIGIASFGPVDLNKKSPTYGYITSTPKPNWGNTDVVGVFKRAFPDVPIGFDTDVNAPALYEVAYGGHGDISSAV-YITVGTGVGVGVCTNGSAIHGFMHPEGGHIIVPKAPQDVETGFKGVCPFHGDCIEGMVASGSIAARTGVDRRELANITDDDPVWDTIAHYLANLCINVTFITSPDVIVIGGGIARREKLFDLIREKFVARVNKYGQQP-----PVEKYIRAS-FHPAIGLVSSLHLARLELEQK 296          
The following BLAST results are available for this feature:
BLAST of NO21G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
2004006008001000120014001600180020002200Expect = 2.60e-91 / Id = 57.14Expect = 8.20e-77 / Id = 52.20Expect = 9.40e-73 / Id = 50.99Expect = 6.70e-71 / Id = 45.75Expect = 8.80e-71 / Id = 52.19Expect = 1.80e-68 / Id = 49.15Expect = 2.00e-67 / Id = 49.48Expect = 2.00e-67 / Id = 48.30Expect = 8.50e-66 / Id = 47.65Expect = 6.10e-64 / Id = 45.54SequenceCBJ27916.1XP_001749119.1XP_009035513.1KOO28166.1XP_003283222.1XP_020431622.1XP_004361085.1XP_012753259.1KYQ92109.1XP_009533846.1
Match NameE-valueIdentityDescription
CBJ27916.12.600e-9157.14conserved unknown protein [Ectocarpus siliculosus][more]
XP_001749119.18.200e-7752.20hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_009035513.19.400e-7350.99hypothetical protein AURANDRAFT_69748 [Aureococcus... [more]
KOO28166.16.700e-7145.75rok family protein [Chrysochromulina sp. CCMP291][more]
XP_003283222.18.800e-7152.19hypothetical protein DICPUDRAFT_96285 [Dictyosteli... [more]
XP_020431622.11.800e-6849.15hypothetical protein PPL_07552 [Heterostelium albu... [more]
XP_004361085.12.000e-6749.48hypothetical protein DFA_05366 [Cavenderia fascicu... [more]
XP_012753259.12.000e-6748.30hypothetical protein SAMD00019534_066930, partial ... [more]
KYQ92109.18.500e-6647.65hypothetical protein DLAC_06949 [Tieghemostelium l... [more]
XP_009533846.16.100e-6445.54hypothetical protein PHYSODRAFT_520447 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004727NSK004727Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00670.1NO21G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606080gene_9467Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100529g1gene7874Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00670.1NO21G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00670 ID=NO21G00670|Name=NO21G00670|organism=Nannochloropsis oceanica|type=gene|length=2341bp
ATGCCGACCTATTTGGGCATCGAAGGCGGGGGCACCACCTGGAAGgcaag
tcgtcgtgttcaagtccctcccccgtattgttctttatgtcttagtcttc
gtcccattccttcgtttgttctaaacccacgactcaaccacaaactcagG
TGGCTATCGCCCAAGACAAGCCGGACAACATCACAGAATCCATTCGCTTT
GACACGACGAGCCCCGAAGAGACCTTTGGCAAGATCAAGgtatgtagttc
ggcctgtctccctttttcttcgccctttgtgccaaacacgactatgagct
ctttgtttctatggactcgccaagacagcgctacatcagccgaccgatga
tcttcacggctgccttccgtcgttgtcttggccatgcctgcctcctctgg
tactcttttctcattccctccctccctctctccctccctccctccctccc
tccctcccttcagGAATGGATAAAGGACAAGAATTACGACTCTGTGGGCA
TTGCCACCTTCGGACCTGTGGACCCTAAACTCACTTCGCCGACATATGGC
CACATCACCACCACCCCCAAGCCTGGCTGGAAGAACGTTGACGTCGTGGG
CGCCTTGACGGgtacttgaacccttcctcggtccttgctgcccacctgcc
tgtcctttccccccttctctcctccgtcccctcttctcctcgagccaccg
taaataatgtgcacgcttcgtccccccctttccttcctccttccattcgc
aacagATGGCAGCAAACCCATTCTCTTCGACACAGACGTGAACGCCCCCG
CCCTGGCCGAGTTCACCTTCCATGCCTCCTCCCCTACGCAATCCTCAGTG
GCCTACATCACGGTCGGCACGGGGGTGGGCGTCGGGCTGGTGATCAATGG
GAAGACGGTGCATGGCCTCGTGCACCCAGAGGGCGGGCACGTCCCTCCCT
TCCGTCTGCCTTCGGACGGGATTAAAGgttctttgcttccctccctccct
ccctccataatttcctcctttcctctttgtctgcctgccttcgtctgcct
ttttctgccaacaagaggaaaagaagtgtgattggtcagtccctccaaat
ctcgcctaaccctccctctccctttcccttccccccctccctccctccct
cccacagGGAACGACCTGTACAAGGACATCGAGGGTCTCTCCAACACCAT
CGCCATTGCCAGTAAGAAGGGCATTGACAGGCACTTGCTCAAGACCATAG
GAGATGATGACGCGGTATGGGACAGCGTGGCCCATGCCTTGGGCTCTCTT
TGCGCGACGTTGGTCCTGATGGTGTCCGTGGAGAGGATCGTCATCTCCGG
TGgtgagggaaaggaaggggggagagggggagggagggagggatggaagg
aagacgggggctgcatcacaactcatcctcgtgggtattaatcctatttg
tttacatccttttgctccccccctccctccctccatccctccctccctcc
tttccccccctccttcagGCGTCTTGAACCGCACCATCCTCTACCCCAAA
ATCCGGGCCAAGACCCTCGAGATTCTGAAAGGGTATATCGTGCACCCGCT
CCTCACGCCCGCCCTCATCGACCAGTACATCACCCCCTCCGAGTGGGGAG
ACAACGCCGGCATCGTGGGGGCCTTGACGCTGGCTAAGGTCGCCCTAGAC
GACAAGGGGAAAAACTCGGTGCTGGGGAAGGCACGGGCATATGTGTGCAA
ACACGGAGCGGCGGTGTTTCTCGGCGTGGTCTTGGGGGCTGCCGCCACTG
CGgtgggtgtctttgggaagcggaagtaggcgaggacaagggagggaggg
aaggacaggagaaatcgtatgcgccttcctcacagCCGGGAAATGAAAGG
AATGTCGGGACGGATGAAAAAGAGGGTGGGATCATTGGCAACAGGTTGAT
CAAGAACAGCAGCAGTAGTAGTAGCAGCAGCAGCAGCGGCAGCGGAATAC
AGATAGAAAGGAAATGCATCCAGAAGGCGAAGGGAGGGAGGGAAGAAAGA
AAAGGAGGGAAGGACGATGTTGCAGGCAGTTTAAGGAAGATGTGTCGTGG
TGTGAGTGCCATTGTGTGTATGGTTGTGTGTGAGAGAGTGTCGATGCATA
AATATTGGAATTATGGGGAAAATGGCAGGCAACAGGAAGTGTCGTTGAAA
GAGAGGGTGGGACAAAGATTTGCTCTGCCACCACAAGCCCAATCGCTCCC
CGACGAAAAGAAGAAGATGAAGCCGCAGTGTTTCGCAAGCAACGTGGGAC
GAGACGAGGGTCCTTGTTTTCCCCACCATTTAGGATTTTAA
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protein sequence of NO21G00670.1

>NO21G00670.1-protein ID=NO21G00670.1-protein|Name=NO21G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MPTYLGIEGGGTTWKVAIAQDKPDNITESIRFDTTSPEETFGKIKEWIKD
KNYDSVGIATFGPVDPKLTSPTYGHITTTPKPGWKNVDVVGALTDGSKPI
LFDTDVNAPALAEFTFHASSPTQSSVAYITVGTGVGVGLVINGKTVHGLV
HPEGGHVPPFRLPSDGIKGNDLYKDIEGLSNTIAIASKKGIDRHLLKTIG
DDDAVWDSVAHALGSLCATLVLMVSVERIVISGGVLNRTILYPKIRAKTL
EILKGYIVHPLLTPALIDQYITPSEWGDNAGIVGALTLAKVALDDKGKNS
VLGKARAYVCKHGAAVFLGVVLGAAATAPGNERNVGTDEKEGGIIGNRLI
KNSSSSSSSSSSGSGIQIERKCIQKAKGGREERKGGKDDVAGSLRKMCRG
VSAIVCMVVCERVSMHKYWNYGENGRQQEVSLKERVGQRFALPPQAQSLP
DEKKKMKPQCFASNVGRDEGPCFPHHLGF*
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