NO21G00570, NO21G00570 (gene) Nannochloropsis oceanica

Overview
NameNO21G00570
Unique NameNO21G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1824
Alignment locationchr21:198657..200480 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:198657..200480 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004737NSK004737Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00570.1NO21G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00570.1NO21G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00570 ID=NO21G00570|Name=NO21G00570|organism=Nannochloropsis oceanica|type=gene|length=1824bp
ATGGCGTACAACTCCGACAACGTCAAGAAATCAATTTACATGGACCAGCA
GGAAAGCAGCGACCCCTCCATCCCTCCTTCCTTCCAGCCCTTCCACCTCT
ATGGCCGCGGACGACGACGGCAGTATCAACCGTGCGAGCTGCAGCATCAG
TTGCAGCAGCAGCAGCAGTTGCAGCAGCACCAGCAACAGCAGCACCAGGA
ACAGGAGGAGGGGCAGCAGGAAGAGCAGTACAGCTTTTCTTCTCTTTTGT
ACGGTCCTACTTCCGTCCACTCTGCCTCTGCTCCTTCGCCTCCTTGCTCT
CACCCCCCTCCTCCTCTTCCTCCTCTTTGCAGTCGAAACGTCTCTCCTCC
CGCTCCCTCCCACTTTCCACCTTATCGCCCATTTGCCCCCTCTTCCTTCT
CCTCCTCCTCCTCCTTTTCCTCCACCATCAGTGCTGATGCAGCCTCCTCT
TTCTCCACGGCCGCCGGAGCCACCGCCGCAGCCGCTGCTGCCGCTGCTGC
TGCTGCTGATGGAGGTGTGTGTCGTACTGCTGCGGTATCTGCTGCTGCAG
GAGAGATAACGAATCGCCTCCAGCTTGGCTTGGATGCTTATCCGTACCGT
CACTACCACCATCAGTCTTGCAATCCGAGCCTCTCGTCGCCGCTTTCTGG
AGGACGAGGTGGAATTGGGGTCGGAGGAGCAAGAGAAAATGGTATGGGGA
AGGCAGAGGAGTCGTATAATGGCGGTGATCTGTCGTATAATGACGATGAC
CTGTCGTTGCTATACGACCAGCAGCAGCAACAGCAACAGCGACAGCAGCG
AATGGTGGGCATTGAAGAAGTGACCATGGTGGCTCGGGGAGAGAGGGAGG
GAGAGAGAGAGGAAAAGGAGAGGCCGCTTTCCATATCCTCTATTAAGGCC
GCGGTTGAGCTGGGTCAAACAGAGCATCAGCTGTCGGAGAATGGAATAAG
GAGAGAAAGAAGGCAGCAGCAGCAGCAACATCATCATCATCAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACCACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACGACAACAACAGCCACAACAACAACAACAGCCACAACA
ACAACTACAGCAGCCGCAGCAGCAGTTTCGACCTCCACCACCGCCGCCCA
TGTATTATAAAGAGCGGGACGTCTCATCCTACTATCCTTCCTCTCCCCCC
CCTCCCTATGAGGAGGAAAAAGTGGGGGAAGGGCAAGGCGGCGGAGGAGG
GGACGAAGAACCTGAAGCTGTTCTCCCGCTCTGTGCTCTCCAGCGTGCAC
GGCAGGAAGGAGATGGTGATCGCAACCACCCCTTTTCCCACCCGTGTCAG
CACGACTCATTTTTTCCTTCTACCCGACCCACACCCTCGATCCGCCCAGA
CCCAGCGTCGTCCTCCCTCCCTCCCTTTCTCCCTCCCTTTGCCACGGATT
ACTCTTCTGGCCTACAATCTGATGTGTTCACGCCTCTGGAAGATGCCTTG
ATGCACCTGAACATTGAGCGCATGCGTTTAAAGGACGAATTGGACAAATT
GTCTTTGCGGCCGCTCCGGACAAGGAAGGATCTAGATCGGTACGCGTGGG
TGGAGGAGAGGTTGAAAGGCATAGGAAAGGAAGCCTGTGAGATTAAGATC
AAATTGAAGCACAAACCTTGGTGA
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protein sequence of NO21G00570.1

>NO21G00570.1-protein ID=NO21G00570.1-protein|Name=NO21G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=608bp
MAYNSDNVKKSIYMDQQESSDPSIPPSFQPFHLYGRGRRRQYQPCELQHQ
LQQQQQLQQHQQQQHQEQEEGQQEEQYSFSSLLYGPTSVHSASAPSPPCS
HPPPPLPPLCSRNVSPPAPSHFPPYRPFAPSSFSSSSSFSSTISADAASS
FSTAAGATAAAAAAAAAAADGGVCRTAAVSAAAGEITNRLQLGLDAYPYR
HYHHQSCNPSLSSPLSGGRGGIGVGGARENGMGKAEESYNGGDLSYNDDD
LSLLYDQQQQQQQRQQRMVGIEEVTMVARGEREGEREEKERPLSISSIKA
AVELGQTEHQLSENGIRRERRQQQQQHHHHQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQQQQQQQQQQQ
QQQQRQQQPQQQQQPQQQLQQPQQQFRPPPPPPMYYKERDVSSYYPSSPP
PPYEEEKVGEGQGGGGGDEEPEAVLPLCALQRARQEGDGDRNHPFSHPCQ
HDSFFPSTRPTPSIRPDPASSSLPPFLPPFATDYSSGLQSDVFTPLEDAL
MHLNIERMRLKDELDKLSLRPLRTRKDLDRYAWVEERLKGIGKEACEIKI
KLKHKPW*
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Synonyms
Publications