NO21G00460, NO21G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G00460 vs. NCBI_GenBank
Match: CBJ25982.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 223.8 bits (569), Expect = 7.200e-55 Identity = 120/225 (53.33%), Postives = 162/225 (72.00%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEEASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVM-GKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV RA+++ +K+ + +L+ KA KNPDEFYFAM + KT+GGVH + E +LPH + LLKTQD+ YV+ R+ D +KA +L+ LH L P NKHT+F DSE + + FD AKHF+TVP LA RAFNRPRK+TLE A V G + QL+KV K+R+ +Y EL RL+R+E MK+ ++ ++ VM KG KRKVQ+A+DG+P VY+WK+ER + Sbjct: 26 GLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAE-TLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKA-QVTGATNRRQLKKVLKKRDASYSELMQRLERAEKMKKAEVHLEAQRKVMNSKGTKRKVQEAKDGRPAVYRWKKERSR 248
BLAST of NO21G00460 vs. NCBI_GenBank
Match: XP_001625648.1 (predicted protein [Nematostella vectensis] >EDO33548.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 209.5 bits (532), Expect = 1.400e-50 Identity = 110/227 (48.46%), Postives = 155/227 (68.28%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEEASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDE---PANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV RA+D+++KK+ + +LR+KAL KNPDEFYF M +KTK GVH V + + L+K QD+ YVN K+ + KK ERLQA LH L P N+H VFVD++ + +AFDPA HF T+P L R +NRP +TL+ + V L+K+ +QR + Y+EL R++R E M+ + E++Q+EK++MGKG + KV+DA D +P VY+WK++RRK Sbjct: 28 GLLEKHKDYVLRARDYHKKKEKLKNLREKALNKNPDEFYFKMISTKTKDGVHHVKQGKQHTA-DQLKLMKAQDLNYVNSKKTAEAKKIERLQASLHLLESSDGGPPNQHIVFVDNKKEAKAFDPATHFGTLPELMNRTYNRPSIDTLK-TSQVTAPVDEQSLKKIERQRNRQYEELKQRIERKEKMQTLTEKLQLEKHLMGKGPRVKVKDATDDQPAVYRWKKKRRK 252
BLAST of NO21G00460 vs. NCBI_GenBank
Match: ETO76537.1 (hypothetical protein F444_08095 [Phytophthora parasitica P1976] >ETP17620.1 hypothetical protein F441_08021 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 204.1 bits (518), Expect = 5.900e-49 Identity = 108/225 (48.00%), Postives = 154/225 (68.44%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEEAS-LPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV+RA+D+N K++ + +L+ KA +NPDEFY M ++KT+GGVH T + + LKTQD+ Y++MKRA+D +KAERL GLHF+ N HTVFVD E V++FD A+HF+T P LA RAFNR RK LE A A+ Q K++ +++ Y+EL RL R++ + Q+ ++ +E+ V KGRK+KV+ AE+G P VY+WK++R+K Sbjct: 26 GLLEKHKDYVKRARDYNSKQQRLKTLQLKAALRNPDEFYHRMRETKTEGGVHVSTHNHLKPVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDTPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELADRAFNRIRKRDLETAELADLAANPKQKYKMQVEKDAMYRELRDRLARAKKLGQMSAKLDLERKVQAKGRKKKVKAAENGMPAVYRWKQQRQK 250
BLAST of NO21G00460 vs. NCBI_GenBank
Match: XP_024583618.1 (u3 small nucleolar rna-associated [Plasmopara halstedii] >CEG47249.1 u3 small nucleolar rna-associated [Plasmopara halstedii]) HSP 1 Score: 203.8 bits (517), Expect = 7.700e-49 Identity = 112/225 (49.78%), Postives = 153/225 (68.00%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEE-ASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV+RA+D+N K+K + L+ KA +NPDEFY M +KT+GGVH T SL + LKTQD+ Y+++KRA+D +KAERL GLHF+ NKHTVFVD + VE FD A++F+TVP LA RAFNR R+ LE AS Q K++ +R+ Y+EL RL R++ + Q+ ++ +E+ V KGRKRKV+ AE+G P VY+WK++R+K Sbjct: 26 GLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTRAKKIGQMSAKLDLERKVQAKGRKRKVKAAENGMPAVYRWKQQRQK 250
BLAST of NO21G00460 vs. NCBI_GenBank
Match: XP_008904792.1 (hypothetical protein PPTG_11265 [Phytophthora parasitica INRA-310] >ETI47770.1 hypothetical protein F443_08055 [Phytophthora parasitica P1569] >ETK87745.1 hypothetical protein L915_07879 [Phytophthora parasitica] >ETL41154.1 hypothetical protein L916_07805 [Phytophthora parasitica] >ETM47559.1 hypothetical protein L914_07766 [Phytophthora parasitica] >ETN09646.1 hypothetical protein PPTG_11265 [Phytophthora parasitica INRA-310] >ETP45651.1 hypothetical protein F442_07988 [Phytophthora parasitica P10297] >KUF74006.1 U3 small nucleolar RNA-associated protein 11 [Phytophthora nicotianae]) HSP 1 Score: 203.4 bits (516), Expect = 1.000e-48 Identity = 108/225 (48.00%), Postives = 154/225 (68.44%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEEAS-LPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV+RA+D+N K++ + +L+ KA +NPDEFY M ++KT+GGVH T + + LKTQD+ Y++MKRA+D +KAERL GLHF+ N HTVFVD E V++FD A+HF+T P LA RAFNR RK LE A A+ Q K++ +++ Y+EL RL R++ + Q+ ++ +E+ V KGRK+KV+ AE+G P VY+WK++R+K Sbjct: 26 GLLEKHKDYVKRARDYNSKQQRLKTLQLKAALRNPDEFYHRMRETKTEGGVHVSTHNHLKPVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDTPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELADRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLARAKKLGQMSAKLDLERKVQAKGRKKKVKAAENGMPAVYRWKQQRQK 250
BLAST of NO21G00460 vs. NCBI_GenBank
Match: XP_002896864.1 (U3 small nucleolar RNA-associated protein, putative [Phytophthora infestans T30-4] >EEY66799.1 U3 small nucleolar RNA-associated protein, putative [Phytophthora infestans T30-4]) HSP 1 Score: 203.0 bits (515), Expect = 1.300e-48 Identity = 109/225 (48.44%), Postives = 152/225 (67.56%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEE-ASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV+RA+D+N K+K + +L+ KA +NPDEFY M +KT+GGVH T S+ + LKTQD+ Y++MKRA+D +KAERL GLHF+ N HTVFVD E V++FD A+HF+T P L RAFNR RK LE A A+ Q K++ +++ Y+EL RL R+ + Q+ ++ +E+ V KGRK+KV+ AE+G P VY+WK++R+K Sbjct: 26 GLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLARANKLGQMSAKLDLERKVQAKGRKKKVKAAENGMPAVYRWKQQRQK 250
BLAST of NO21G00460 vs. NCBI_GenBank
Match: OWZ04019.1 (U3 small nucleolar RNA-associated protein [Phytophthora megakarya]) HSP 1 Score: 202.2 bits (513), Expect = 2.200e-48 Identity = 109/225 (48.44%), Postives = 154/225 (68.44%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEE-ASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV+RA+D+N K+K + +L+ KA +NPDEFY M +++ +GGVH T S+ + LKTQD+ Y++MKRA+D +KAE+L GLHF+ NKHTVFVD E DV+ FD A+HF+T P LA RAFNR RK LE A A+ Q K++ +++ Y+EL RL R++ + Q+ ++ +E+ V KG+K KVQ AE+G P VY+WK++R+K Sbjct: 26 GLLEKHKDYVKRARDYNSKQKRLKALQLKAALRNPDEFYHRMRETQMEGGVHVSTHNHIKSVDTEALRSLKTQDLAYLHMKRAVDLRKAEKLNRGLHFVDAPKNNKHTVFVDEEQDVDGFDVAEHFDTAPELADRAFNRIRKRDLETAELPDLAANPKQKHKMQVEKDAMYRELRDRLARAKKIGQMSAKLDLERKVQAKGKKVKVQAAENGIPAVYRWKQQRQK 250
BLAST of NO21G00460 vs. NCBI_GenBank
Match: ETL94328.1 (hypothetical protein L917_07694 [Phytophthora parasitica]) HSP 1 Score: 201.4 bits (511), Expect = 3.800e-48 Identity = 107/225 (47.56%), Postives = 153/225 (68.00%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEEAS-LPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDEPANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV+RA+D+N K++ + +L+ KA +NPDEFY M ++KT+GGVH T + + LKTQD+ Y++MKRA+D +KAERL GLHF+ N HTVFVD V++FD A+HF+T P LA RAFNR RK LE A A+ Q K++ +++ Y+EL RL R++ + Q+ ++ +E+ V KGRK+KV+ AE+G P VY+WK++R+K Sbjct: 26 GLLEKHKDYVKRARDYNSKQQRLKTLQLKAALRNPDEFYHRMRETKTEGGVHVSTHNHLKPVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDTPKNNNHTVFVDDGEQVDSFDVAEHFDTAPELADRAFNRIRKRDLETAELADLAANPKQKYKMQVEKDAMYRELRDRLARAKKLGQMSAKLDLERKVQAKGRKKKVKAAENGMPAVYRWKQQRQK 250
BLAST of NO21G00460 vs. NCBI_GenBank
Match: XP_020620074.1 (probable U3 small nucleolar RNA-associated protein 11 [Orbicella faveolata]) HSP 1 Score: 200.7 bits (509), Expect = 6.500e-48 Identity = 105/232 (45.26%), Postives = 159/232 (68.53%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQVTPEEASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDE-----PANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQ---LQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV RA+D++RK+ + L++KAL +NPDEFYF M SKTK GVH + + L+KTQD+ Y+N KR+++ KK E+LQA LH L DE P N+H VFVDS+ + ++FD A HF+T+P L R +NRP++ETL ++ + P ++++ KQR + Y+EL R++R + M++V E ++++K++MGKGR+ K+Q ++ PVYKWK+ER++ Sbjct: 28 GLLEKHKDYVLRARDYHRKQNRLKLLKEKALNRNPDEFYFKMISSKTKDGVHTFKKTKKHTAEA-LKLMKTQDLNYINSKRSMEAKKIEKLQASLHLLADEDNNSHPPNQHIVFVDSQKEAQSFDAATHFDTLPELVSRTYNRPKRETL-----MKQLIQTPDDQIVKRLEKQRHRCYEELRERIEREKKMQKVSEELELQKHLMGKGRRYKIQ-KDEKSTPVYKWKKERKR 252
BLAST of NO21G00460 vs. NCBI_GenBank
Match: XP_022781379.1 (probable U3 small nucleolar RNA-associated protein 11 [Stylophora pistillata] >PFX31231.1 putative U3 small nucleolar RNA-associated protein 11 [Stylophora pistillata]) HSP 1 Score: 198.7 bits (504), Expect = 2.500e-47 Identity = 108/231 (46.75%), Postives = 156/231 (67.53%), Query Frame = 0 Query: 74 GLLEKHKDYVERAKDFNRKKKTISSLRQKALFKNPDEFYFAMTKSKTKGGVHQV----TPEEASLPHGHIALLKTQDMRYVNMKRALDTKKAERLQAGLHFLLDE---PANKHTVFVDSEADVEAFDPAKHFNTVPALAGRAFNRPRKETLEAATSVQGVASVPQLQKVRKQREKAYKELGARLKRSETMKQVLERMQVEKNVMGKGRKRKVQDAEDGKPPVYKWKRERRK 298 GLLEKHKDYV RAKD+++K+ + L++KAL KNPDEFYF M SKTK G+H V T +L H +KTQD+ Y+N KR+++ KK E+LQA LH L D+ P N+H VFVDSE + + FD A HF+TVP L RA+NRP KETL+ + +Q++ KQR + Y+EL R++R M+++ E ++++K++MGKGR+ K+ ++ PVY+WK+ER++ Sbjct: 28 GLLEKHKDYVLRAKDYHKKQNALKLLKEKALNKNPDEFYFKMISSKTKDGIHCVKRGKTHTAEALKH-----MKTQDLNYINSKRSMEAKKIEKLQASLHLLGDDDVRPVNQHVVFVDSEKEAQCFDAAAHFDTVPELVTRAYNRPTKETLK--RHLVQTPDEQTVQRLGKQRHRCYEELRERIERERKMQKMCEELELQKHLMGKGRRVKIH-KDEKSTPVYRWKKERKR 250 The following BLAST results are available for this feature:
BLAST of NO21G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00460 ID=NO21G00460|Name=NO21G00460|organism=Nannochloropsis oceanica|type=gene|length=2109bpback to top protein sequence of NO21G00460.2 >NO21G00460.2-protein ID=NO21G00460.2-protein|Name=NO21G00460.2|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top protein sequence of NO21G00460.1 >NO21G00460.1-protein ID=NO21G00460.1-protein|Name=NO21G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=252bpback to top Synonyms
Publications
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