NO21G00320, NO21G00320 (gene) Nannochloropsis oceanica

Overview
NameNO21G00320
Unique NameNO21G00320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length439
Alignment locationchr21:104886..105324 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:104886..105324 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL030nonsL030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL029nonsL029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR099ngnoR099Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007421NSK007421Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00320.1NO21G00320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101461g1gene9723Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00320.1NO21G00320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00320 ID=NO21G00320|Name=NO21G00320|organism=Nannochloropsis oceanica|type=gene|length=439bp
ATGGATGGGTGGGTTCGGGGGCTGGGGCTTGAGCTCATGCGGATGCTCCT
CTGCGATCTCCTGGCGCCGGATGTGGTGGTCAAGATGGAGgtgaggaggg
gaaaggagacagggggggcaggagggaggcagggacggagagtaggaagg
gaggaaagaaaggaaagagggagggtagctttcgtgatgccgcggacaat
cgagtaaaggccttttacccacctgcttctccttccctccgttttttgcc
ctccctctctccctccctccctcctttccttccttcctctagGGCTCGTC
GAAGGCCGCTGGTTTTGCTCTTCCTGCGCCCCTTCCTTCTCACACCCGTG
TGCTTGCAGTAGAAGCCGCGCTGCTGAAGGAGGGGGGGAGGGAGGGAAGG
AGGGAGGGAGGGAGAGGAGGAGGAGGGGGGGAGCAGTAG
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protein sequence of NO21G00320.1

>NO21G00320.1-protein ID=NO21G00320.1-protein|Name=NO21G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=79bp
MDGWVRGLGLELMRMLLCDLLAPDVVVKMEGSSKAAGFALPAPLPSHTRV
LAVEAALLKEGGREGRREGGRGGGGGEQ*
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Synonyms
Publications