NO21G00250, NO21G00250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G00250 vs. NCBI_GenBank
Match: XP_005855299.1 (nucleoredoxin-like protein 2 [Nannochloropsis gaditana CCMP526] >EKU21055.1 nucleoredoxin-like protein 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 232.6 bits (592), Expect = 1.400e-57 Identity = 133/270 (49.26%), Postives = 160/270 (59.26%), Query Frame = 0 Query: 19 SSSRRILALKLFLLGMGGCALLAAVYLP------------GRETGIASENIRESNMRTLMGDTPAEADLLGASPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLFPADAQLRDLTGALINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADGVTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKWNYVEWKWE 277 S + L LKL L M CAL+AAV+ P + G NI E + + AE + PA+D LLFPADAQL+DLTGAL+NANEALA +SVGLYFGAGWCSMTRAANPGV+A++ RE++GVTLV+VSSD +A L +QQ N WPFAVP DSPLR SLKE Y VWS E G+R S IPT+MVVGKDG E+ARL+VG +G+ EL +WNY+EWKWE Sbjct: 20 SGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPRQANIMEPSALAVAAPPVAE---VPPGPAQDITPEPP-------------------------------LLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 255
BLAST of NO21G00250 vs. NCBI_GenBank
Match: EWM22534.1 (Thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 231.9 bits (590), Expect = 2.400e-57 Identity = 128/258 (49.61%), Postives = 155/258 (60.08%), Query Frame = 0 Query: 19 SSSRRILALKLFLLGMGGCALLAAVYLPGRETGIASENIRESNMRTLMGDTPAEADLLGASPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLFPADAQLRDLTGALINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADGVTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKWNYVEWKWE 277 S + L LKL L M CAL+AAV+ P + G+ D++G + D LLFPADAQL+DLTGAL+NANEALA +SVGLYFGAGWCSMTRAANPGV+A++ RE++GVTLV+VSSD +A L +QQ N WPFAVP DSPLR SLKE Y VWS E G+R S IPT+MVVGKDG E+ARL+VG +G+ EL +WNY+EWKWE Sbjct: 100 SGLKNSLTLKLVFLAMCACALVAAVHSP-EDDGV---------------------DVIGTALRGDHGPRRANIMEPAALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 335
BLAST of NO21G00250 vs. NCBI_GenBank
Match: XP_005832701.1 (hypothetical protein GUITHDRAFT_108595 [Guillardia theta CCMP2712] >EKX45721.1 hypothetical protein GUITHDRAFT_108595 [Guillardia theta CCMP2712]) HSP 1 Score: 98.2 bits (243), Expect = 4.200e-17 Identity = 53/156 (33.97%), Postives = 76/156 (48.72%), Query Frame = 0 Query: 126 DAQLRDLTGALINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREAD------GVTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKWNYVEWKW 276 DA + D G + +A G++VGLYF WC M R+ P + + + D T+V+VSSD G + +DSPLR LK+K+R+W E + R SGIP M+V+G+DG E+ ++ KGV L WN W Sbjct: 30 DAMVVDQDGHKMRLEDAAKGRTVGLYFAGEWCPMCRSFTPKLKEFFNEKAQDKQTGNQRATIVFVSSDFSKEAADSHFRNQGNWLYLDYDSPLRQQLKQKFRIWGGMESSSLGFDRRSGIPGMVVIGRDGNEITYMNTESKGVKALEAWNLDSNAW 185
BLAST of NO21G00250 vs. NCBI_GenBank
Match: CEL98253.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 90.9 bits (224), Expect = 6.700e-15 Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 142 ALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADG--VTLVYVSSDMD-AAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKG-RRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKWNYVEWKWE 277 +L GKSV LYF AGWC M ++ P + ++ DG + +++VSSD D A+ + +G + +D PL LK ++ VW+ E F+G R +G+P ++V+G DG E+ +D KG L +W++ WE Sbjct: 88 SLQGKSVALYFAAGWCPMCQSFTPVLRSFYQRVNTDGQKIEVIFVSSDGDNASQAAHMEASHGPWLRIDYDDPLTDKLKRQHGVWARRESHKFEGMTRRAGVPGVVVIGSDGHELQFMDTERKGGGALDQWDFEHKLWE 226
BLAST of NO21G00250 vs. NCBI_GenBank
Match: OLP78913.1 (putative nucleoredoxin 1 [Symbiodinium microadriaticum]) HSP 1 Score: 72.4 bits (176), Expect = 2.500e-9 Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 0 Query: 126 DAQLRDLTGALINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADGVTLVYVSSDMDAAGLTQQQTENGWPF-AVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKG 262 DA+ +++ G+ +L GKSV LYF WC M A P ++ ++ ++ +V+VSSD Q ++ F +VP S ++ SLK K+ +W E + G R GIP ++V+ GEE LD KG Sbjct: 123 DAEGKEVDGS------SLEGKSVALYFAGEWCPMCTAFTPVLTEFM--KDVGDKAVVFVSSDFTKEEYDQHRSHLPSQFLSVPFGSEMQDSLKRKFHLWGGREIPKYGGDRRGGIPALVVITPGGEEQKYLDAESKG 251
BLAST of NO21G00250 vs. NCBI_GenBank
Match: OEU23719.1 (putative nucleoredoxin [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 0 Query: 136 LINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADG--VTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKW 269 +I+ +E L K V LYF AGWC M + P + ++ + G + L+Y+SSD + ++ ++ + VP LK+KY++W+ E F R SG+P ++V+ K GEE+A + +G LA W Sbjct: 57 VIDLDEKLKDKRVALYFTAGWCPMCTSFEPALMSFQQNAKDAGKPIELIYISSDRNEETNIKRASQLNM-YTVPFGDQ-TAELKKKYKIWAGSETFQFGFGRRSGVPAIVVLDKTGEELAFVAAESQGAKALATW 189
BLAST of NO21G00250 vs. NCBI_GenBank
Match: OEU23720.1 (putative nucleoredoxin [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 0 Query: 136 LINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADG--VTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKW 269 +I+ +E L K V LYF AGWC M + P + ++ + G + L+Y+SSD + ++ ++ + VP LK+KY++W+ E F R SG+P ++V+ K GEE+A + +G LA W Sbjct: 35 VIDLDEKLKDKRVALYFTAGWCPMCTSFEPALMSFQQNAKDAGKPIELIYISSDRNEETNIKRASQLNM-YTVPFGDQ-TAELKKKYKIWAGSETFQFGFGRRSGVPAIVVLDKTGEELAFVAAESQGAKALATW 167
BLAST of NO21G00250 vs. NCBI_GenBank
Match: OEU23721.1 (putative nucleoredoxin [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 71.6 bits (174), Expect = 4.200e-9 Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = 0 Query: 136 LINANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADG--VTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFKGRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKW 269 +I+ +E L K V LYF AGWC M + P + ++ + G + L+Y+SSD + ++ ++ + VP LK+KY++W+ E F R SG+P ++V+ K GEE+A + +G LA W Sbjct: 29 VIDLDEKLKDKRVALYFTAGWCPMCTSFEPALMSFQQNAKDAGKPIELIYISSDRNEETNIKRASQLNM-YTVPFGDQ-TAELKKKYKIWAGSETFQFGFGRRSGVPAIVVLDKTGEELAFVAAESQGAKALATW 161
BLAST of NO21G00250 vs. NCBI_GenBank
Match: XP_005772491.1 (hypothetical protein EMIHUDRAFT_102068 [Emiliania huxleyi CCMP1516] >XP_005783922.1 hypothetical protein EMIHUDRAFT_231900 [Emiliania huxleyi CCMP1516] >EOD20062.1 hypothetical protein EMIHUDRAFT_102068 [Emiliania huxleyi CCMP1516] >EOD31493.1 hypothetical protein EMIHUDRAFT_231900 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.2 bits (173), Expect = 5.500e-9 Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = 0 Query: 131 DLTGALIN---ANEALAGKSVGLYFGAGWCSMTRAANPGVSAWITAREADG--VTLVYVSSDMDAAGLTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAFK--GRRVSGIPTMMVVGKDGEEMARLDVGMKGVDELAKW 269 D GA ++ + L GK V LYF AGWC M + P + ++ A E G +L+YV SD A ++ G +VP + +LK+++++W+ E GRR SG+P ++V+ +GEE+A + +GV L W Sbjct: 39 DQQGAALSEAATTQQLGGKRVALYFSAGWCPMCTSFEPSLQQFLQASEDSGKPCSLIYVPSDRTEAEALRRAKGLGL-LSVPFEE--ADALKKQFKIWAGAESMKLGPFGRR-SGVPALVVLSSEGEELAFVPAEAQGVRALQSW 179
BLAST of NO21G00250 vs. NCBI_GenBank
Match: XP_008873460.1 (hypothetical protein H310_09218 [Aphanomyces invadans] >ETV97899.1 hypothetical protein H310_09218 [Aphanomyces invadans]) HSP 1 Score: 67.4 bits (163), Expect = 8.000e-8 Identity = 45/143 (31.47%), Postives = 75/143 (52.45%), Query Frame = 0 Query: 136 LINANEAL---AGKSVGLYFGAGWCSMTRAANPGVSAWITA--READGVTLVYVSSDMDAAG-LTQQQTENGWPFAVPHDSPLRTSLKEKYRVWSMHEDKAF-KGRRVSGIPTMMVVGKDGEEM---ARLDVGMKGVDELAKW 269 L+NA A+ A K++ LYF A WC R P ++ + + +A +V++SSD + L + + G AVP D P+R LK K+++ + E +A RV GIP++++V GE + A + + GV +L+ W Sbjct: 10 LVNAAGAIQEPAAKTLALYFAADWCPECRDFQPKLNEFYSKVNEQAHQFDVVFISSDANEDDQLAHFRNKQGPWLAVPFDDPIRDELKRKFKICAKKEMEAVGVSERVGGIPSVVIVTSSGEVVDADAAIKIDTDGVQDLSAW 152 The following BLAST results are available for this feature:
BLAST of NO21G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00250 ID=NO21G00250|Name=NO21G00250|organism=Nannochloropsis oceanica|type=gene|length=1584bpback to top protein sequence of NO21G00250.1 >NO21G00250.1-protein ID=NO21G00250.1-protein|Name=NO21G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top Synonyms
Publications
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