NO21G00190, NO21G00190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G00190 vs. NCBI_GenBank
Match: XP_005854453.1 (hypothetical protein NGA_0210500 [Nannochloropsis gaditana CCMP526] >EKU21906.1 hypothetical protein NGA_0210500 [Nannochloropsis gaditana CCMP526] >EWM20675.1 hypothetical protein Naga_100420g5 [Nannochloropsis gaditana]) HSP 1 Score: 195.7 bits (496), Expect = 1.400e-46 Identity = 120/196 (61.22%), Postives = 139/196 (70.92%), Query Frame = 0 Query: 8 FIIALIATSSGAFIVPSFTS---FSSATLSSSSQSPFHSHRTISMAPSGVPPVAPSNFLFASPNDDSPPSSSNPLTPLLIRLGYKTDTAAEDPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVVRPLVVRGLLNGTE 201 F++ L ++S VPS TS SS TL S P S S + S + FA+P +DS P SN +T LL+RLGY+ + DPR+LRE+L+DFGLAGV SYIASEVLFWFISLPVGI AFHQSTGEWLDLSTS+GQ KVAAFSAGFLTFARVALPLRA VA AL PAL+KYV+RPLV RG+L E Sbjct: 26 FLLPLRFSTSSPSRVPSSTSSRPLSSLTLDS---LPLPSSTRCSTSISRRRHILFDFRTFATPREDSTP--SNAITSLLVRLGYQPEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVARGVLEDKE 216
BLAST of NO21G00190 vs. NCBI_GenBank
Match: CBN75994.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 113.2 bits (282), Expect = 9.300e-22 Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 12 LIATSSGAFIVPSFTSFSSATLSSSSQSPFHSHRTISMAPSGVPPVAPSNFLFASPNDDSPPSSSNPLTPLLIRLGYKTDTAAEDPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVVRPLVVRGLLNGTE 201 L S+ ++ S T+F ++P S + AP + A D+ N L L+ G K+ E +EK+K GLAG ++Y +E+ FW IS+P+ + +HQ+TGEWLDL+T EG+ K+ +AGFLTFAR+ +PLR A+ALALTPA+DKY VV+GLLN E Sbjct: 8 LFLASTALVLLNSSTAFVLPAARVGQRTPARSSPALCTAPGRATRSVTRVHMSAGSADE---EEMNSLDKALVAWGVKS-PPGEPEIDFKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKLFGLTAGFLTFARLVVPLRIALALALTPAMDKY-----VVKGLLNKNE 187
BLAST of NO21G00190 vs. NCBI_GenBank
Match: CEM26925.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 89.4 bits (220), Expect = 1.400e-14 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0 Query: 96 DPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYV 187 D L EK+K+ G+AGV+SY A+EV FW SLP+ I AF + G D++ E KVA +SAGFL+ AR +PLR A ALALTP + KY+ Sbjct: 83 DREKLTEKIKEAGVAGVISYGATEVAFWLTSLPLAIAAFLATFGAIPDMANGEDAAKVAVYSAGFLSIARALVPLRIAAALALTPLVGKYI 173
BLAST of NO21G00190 vs. NCBI_GenBank
Match: GAX09334.1 (hypothetical protein FisN_6Lh297 [Fistulifera solaris]) HSP 1 Score: 88.6 bits (218), Expect = 2.400e-14 Identity = 61/168 (36.31%), Postives = 95/168 (56.55%), Query Frame = 0 Query: 25 FTSFSSATLSSSSQSPFHSHRTISMAPSGVPPVAPSNFLFASPNDDSPPSSSNPLTPLLI-RLGYKTD----TAAEDPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVV 188 F +S L+SSS + R +++ + + PS + +S N S PS ++ L I R +T T ++P + +++KD G AG++SY E+ FWFIS+P +FA+ Q+TG W DLS +E K+ A + F+ FAR A+PLR +AL+ TP + K VV Sbjct: 12 FAFVASMLLASSSA---FAPRPLTVTRTRIALADPSQTMESSNNSQSAPSVTSSLGGEYIQRTAIETTPPPLTEDKNPANMMQQIKDAGKAGIISYALWELGFWFISIPFCLFAYQQATGHWPDLSNAEDTAKLGAEAFAFVNFARFAVPLRIGLALSTTPWIQKNVV 176
BLAST of NO21G00190 vs. NCBI_GenBank
Match: GAX22050.1 (hypothetical protein FisN_6Hh297 [Fistulifera solaris]) HSP 1 Score: 86.3 bits (212), Expect = 1.200e-13 Identity = 62/167 (37.13%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 25 FTSFSSATLSSSSQSPFHSHRTISMAPSGVPPVAPSNFLFASPND-DSPPSSSNPL-TPLLIRLGYKTDTAAED--PRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVV 188 F+ +S L+SSS + R + + + + PS + +S N+ S PS ++ L + R +T AED P + +++KD G AG++SY E+ FWFIS+P +FA+ Q+TG W DLS E K+ A + F+ FAR A+PLR +AL+ TP + K VV Sbjct: 10 FSFVASMLLASSSA---FAPRPLMVTRTRLALADPSQTMESSNNNSQSAPSVTSSLGGEYMQRTAIETPPPAEDKNPANMMQQIKDAGKAGIISYALWELGFWFISIPFCLFAYQQATGHWPDLSNPEDTAKLGAEAFAFVNFARFAVPLRIGLALSTTPWIQKNVV 173
BLAST of NO21G00190 vs. NCBI_GenBank
Match: KOO23834.1 (hypothetical protein Ctob_000765 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 80.1 bits (196), Expect = 8.700e-12 Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = 0 Query: 89 KTDTAAEDPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVV 188 + + ED +++ +K+KD G+AG++SYI E FW +S+PV +F F++ TG + D S SE K+ A + F+ AR A+PLR +AL TP + + +V Sbjct: 229 EVEPVVEDSKSMMQKVKDAGVAGIISYIFWEWAFWGVSVPVSLFGFYEVTGHYPDFSNSEDLQKLGAEAFAFVNVARFAVPLRIGLALGTTPWVQENIV 327
BLAST of NO21G00190 vs. NCBI_GenBank
Match: XP_002290122.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91874.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.3 bits (194), Expect = 1.500e-11 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = 0 Query: 96 DPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVVRPLVVRG 195 + + L +K+K G AG +SY E+ FW +SLPV + + Q TG W D S SE KV A + F+ FAR+A+PLR +AL+ T +D+ VV+ + +G Sbjct: 395 ETQKLLQKVKQAGTAGAISYALWELAFWGVSLPVCVVGYKQLTGHWPDFSNSEDMQKVGAEAFAFVNFARLAVPLRIGLALSTTQWIDENVVQKFMKKG 493
BLAST of NO21G00190 vs. NCBI_GenBank
Match: XP_005833747.1 (hypothetical protein GUITHDRAFT_70348 [Guillardia theta CCMP2712] >EKX46767.1 hypothetical protein GUITHDRAFT_70348 [Guillardia theta CCMP2712]) HSP 1 Score: 78.6 bits (192), Expect = 2.500e-11 Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = 0 Query: 103 KLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTP 181 K+KD G+AG+V+Y E +FW IS+P IFA+HQ+TGEW E KV+A GFL AR +P+R A+ LA P Sbjct: 3 KVKDAGVAGLVAYAIWEFIFWAISVPTAIFAYHQTTGEWPSFDNPESTAKVSAVIFGFLNVARALVPVRIAITLATAP 80
BLAST of NO21G00190 vs. NCBI_GenBank
Match: OEU20448.1 (hypothetical protein FRACYDRAFT_267638 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 78.6 bits (192), Expect = 2.500e-11 Identity = 39/91 (42.86%), Postives = 62/91 (68.13%), Query Frame = 0 Query: 96 DPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYV 187 + + + ++K+ GLAGV+SY E+ FW IS+PV IF +++ TG + DL+ +E QGK+ A + F+ FAR A+PLR +AL TP +D+ + Sbjct: 3 ETQKMMAQVKEAGLAGVISYALWELGFWAISVPVCIFGYYEVTGHFPDLTNAEDQGKLGAEAFAFVNFARFAVPLRIGLALGTTPWIDENI 93
BLAST of NO21G00190 vs. NCBI_GenBank
Match: XP_005765270.1 (hypothetical protein EMIHUDRAFT_104012 [Emiliania huxleyi CCMP1516] >XP_005769016.1 hypothetical protein EMIHUDRAFT_244908 [Emiliania huxleyi CCMP1516] >EOD12841.1 hypothetical protein EMIHUDRAFT_104012 [Emiliania huxleyi CCMP1516] >EOD16587.1 hypothetical protein EMIHUDRAFT_244908 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.0 bits (188), Expect = 7.400e-11 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 0 Query: 75 SSNPLTPLLIRLGYKTDTAAEDPRTLREKLKDFGLAGVVSYIASEVLFWFISLPVGIFAFHQSTGEWLDLSTSEGQGKVAAFSAGFLTFARVALPLRAAVALALTPALDKYVV 188 SS P++ K E +K+KD G+AG++SY+ E FW +S+PV + + + TG W DL+ SE Q K+ A + F+ AR A+PLR +AL TP + +V Sbjct: 41 SSGAFAPVMRLKDGKDAGEGEGGGVTMQKIKDAGVAGIISYVFWEWAFWGVSVPVCVLGYREVTGHWPDLTNSEDQAKLGAEAFAFVNVARFAIPLRIGLALGTTPWVQANIV 153 The following BLAST results are available for this feature:
BLAST of NO21G00190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00190 ID=NO21G00190|Name=NO21G00190|organism=Nannochloropsis oceanica|type=gene|length=791bpback to top protein sequence of NO21G00190.1 >NO21G00190.1-protein ID=NO21G00190.1-protein|Name=NO21G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=203bpback to top Synonyms
Publications
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