NO21G00170, NO21G00170 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO21G00170 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 125.2 bits (313), Expect = 2.300e-25 Identity = 79/200 (39.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVG-TLAVTNTDCTE--KDGAKSTRYLCTPGAS--TPAPT 195
MR AF LLALG T V+TA Q + TL ++K +D ++ +DQWS+KG +DDPT T VPL+ GL V L D + + FA S+C N +G CK GAR ++ K+++ PK A + +++ +S YY SG+FRR +F + PLTV+ ++ + + C+E K ++TR CTPG + TPAPT
Sbjct: 1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSI-KMSRRPKGANV----QNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPVTPAPT 195
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 122.1 bits (305), Expect = 1.900e-24 Identity = 78/200 (39.00%), Postives = 114/200 (57.00%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVG-TLAVTNTDCTE--KDGAKSTRYLCTPGASTPAPTGL 197
MR AF LLALG T V+TA Q + TL ++K +D ++ +DQWS+KG +DDPT T VPL+ GL V L D + + FA S+C N +G CK GAR ++ K+++ PK A + +++ +S YY SG+FRR +F + PLTV+ ++ + + C+E K ++TR CTPG TP GL
Sbjct: 20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSI-KMSRRPKGAYV----QNSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG-PTPLTRGL 213
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 116.3 bits (290), Expect = 1.100e-22 Identity = 77/199 (38.69%), Postives = 114/199 (57.29%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTE--KDGAKSTRYLCTPGAS--TPAPT 195
MR SLLALG T V+TA Q TL ++K + ++ +DQWS+KG +D+P VP + +GL V L+D + +++ FA + C L N +G CK GAR ++++ + PK A + K + ++S YY SG+FRR +F V TPLTV G+ A+ +T C+E K + T+ CTPG + TPAPT
Sbjct: 1 MRRILSLLALGVTLVMTAGQEF-TLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKV----KSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLTVQVVVGSTTLPAIVST-CSERTKGAGRITKITCTPGPAPVTPAPT 192
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana]) HSP 1 Score: 114.8 bits (286), Expect = 3.100e-22 Identity = 81/197 (41.12%), Postives = 108/197 (54.82%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTEKDGAKSTRYLCTPGASTP--APT 195
MR SLLALG T LT Q M++L SIK + R NKD+WS+KG ++DPT V + GL V L+D+ + + +FA +C N KG CK+ GAR ++R +K PK + K +N T YY +SG FR + V +PLT VGTL+ T TDC+ + GA +TR C PG P APT
Sbjct: 68 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSIR-ASKPPKGVKV---KTYNSTGG---YYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPGPIIPTNAPT 255
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 110.9 bits (276), Expect = 4.500e-21 Identity = 74/189 (39.15%), Postives = 106/189 (56.08%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTE--KDGAKSTRYLCTP 187
MR SLLALG T V+TA Q TL +IK + +DQWS+KG +D+PT VP++ GL V L+D++ +++ FA + C L N +G CK GAR +++ + PK+A + K + +S YY SG+FRR +F TV TPLTV G A+ +T C+E K + T+ CTP
Sbjct: 1 MRCILSLLALGITLVMTAGQEF-TLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKV----KSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQLVVGTTTLPAIVST-CSERTKSAGRITKITCTP 182
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana]) HSP 1 Score: 108.6 bits (270), Expect = 2.200e-20 Identity = 75/188 (39.89%), Postives = 100/188 (53.19%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTEKDGAKSTRYLCTPG 188
MR SLLALG T LT Q M++L SIK + + NKD+WS+K +++DPT V + GL V L+D+ + + FA +C N KG CK+ GAR ++R +K PK K HN T YY +SG FRR + V PLT VGTL+ T T C+ K G K+ + C PG
Sbjct: 80 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIR-ASKPPK----GVGKSHNSTGG---YYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 257
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana]) HSP 1 Score: 108.6 bits (270), Expect = 2.200e-20 Identity = 75/188 (39.89%), Postives = 100/188 (53.19%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTEKDGAKSTRYLCTPG 188
MR SLLALG T LT Q M++L SIK + + NKD+WS+K +++DPT V + GL V L+D+ + + FA +C N KG CK+ GAR ++R +K PK K HN T YY +SG FRR + V PLT VGTL+ T T C+ K G K+ + C PG
Sbjct: 11 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSIR-ASKPPK----GVGKSHNSTGG---YYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 188
BLAST of NO21G00170 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.5 bits (262), Expect = 1.900e-19 Identity = 74/188 (39.36%), Postives = 100/188 (53.19%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTEKDGAKSTRYLCTPG 188
MR SLLALG T LT Q M++L SIK + + NKD+WS+KG+++DPT V + GL V L+D + +FA +C + KG CK+ GAR ++R +K PK K HN T Y+ +SG FRR + V PLT VGTL+ T T C+ K G K+ + C PG
Sbjct: 1 MRRGLSLLALGLTLALTTGQ-MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSIR-ASKPPK----GVGKSHNSTGG---YFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 178
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana]) HSP 1 Score: 102.8 bits (255), Expect = 1.200e-18 Identity = 65/175 (37.14%), Postives = 101/175 (57.71%), Query Frame = 0
Query: 1 MRSAFSLLALGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKINKLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTA-TVATPLTVIFAAGNVGTLAVTNTDCTEK 175
MR SLLALG T V+TA Q TL ++K + ++ +DQWS+KG +D+P VP + +GL V L+D + +++ FA + C L N +G CK GAR ++++ + PK A + K + ++S YY SG+FRR +F V TP+TV G+ A+ +T C+E+
Sbjct: 37 MRRILSLLALGVTLVMTAGQEF-TLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKV----KSSNSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKVGSTTLPAIVST-CSER 204
BLAST of NO21G00170 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 99.0 bits (245), Expect = 1.800e-17 Identity = 75/205 (36.59%), Postives = 105/205 (51.22%), Query Frame = 0
Query: 1 MRSAFSLLA----LGTTFVLTAAQPMVTLTSIKAVDVARENKDQWSLKGYVDDPTGTYVPLVDDIGLNVRLVDSNNVNISAVNFAPSECNPLLNDKGTVCKVTGARYTLRKIN----KLPKSAMISAQKKHNKTSSESFYYKLSGVFRRQEFTAT-VATPLTVIFAAGNVGTLAVTNTDCTE--KDGAKSTRYLCTPGASTPAPT 195
MRS SLLA LG+T V TA Q + L SI+AVD + NKD W +KG ++DP+ T+VP + GL V L D+ ++ V FA S+C + + CK+ GAR ++++ K PK+ K +N T YY ++G FR F V +PLT N L+ T C + + A+ST C PG P PT
Sbjct: 1 MRSPLSLLALGITLGSTLVTTAGQDL-NLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRRPKIKTPKTV---HAKSYNSTGG---YYSVTGTFRGLTFLENPVVSPLTAALRV-NGSVLSDTLISCYDLARKSARSTISQCEPGPPVPTPT 197 The following BLAST results are available for this feature:
BLAST of NO21G00170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 16
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00170 ID=NO21G00170|Name=NO21G00170|organism=Nannochloropsis oceanica|type=gene|length=2340bpback to top protein sequence of NO21G00170.1 >NO21G00170.1-protein ID=NO21G00170.1-protein|Name=NO21G00170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
|