NO20G02590, NO20G02590 (gene) Nannochloropsis oceanica

Overview
NameNO20G02590
Unique NameNO20G02590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4050
Alignment locationchr20:820952..825001 +

Link to JBrowse

Properties
Property NameValue
DescriptionProlyl 4-hydroxylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:820952..825001 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0031418L-ascorbic acid binding
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506iron ion binding
GO:0030246carbohydrate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR006620Pro_4_hyd_alph
Homology
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: EWM20493.1 (prolyl 4-hydroxylase [Nannochloropsis gaditana])

HSP 1 Score: 187.2 bits (474), Expect = 1.000e-43
Identity = 92/122 (75.41%), Postives = 105/122 (86.07%), Query Frame = 0 
Query:  247 MREEAVGLYRAGVFYPSFAFRGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFP----PSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDNNCGDSRKVNWV 365
            MR+EA GL++AGVFYPSFA+RG+ERL+KKNV+N+EL+GHEWDYAPSLLMYTR++LLHLPPLLNSL+LPL  P    PS PPSLLRL    Y NKIAVSTG GSHFL+HTDNN GDSRKV  V
Sbjct:    1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLV 122
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: XP_005853645.1 (hypothetical protein NGA_0470500 [Nannochloropsis gaditana CCMP526] >EKU22712.1 hypothetical protein NGA_0470500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 184.5 bits (467), Expect = 6.700e-43
Identity = 90/118 (76.27%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:  247 MREEAVGLYRAGVFYPSFAFRGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPP----SHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDNNCGDSRK 361
            MR+EA GL++AGVFYPSFA+RG+ERL+KKNV+N+EL+GHEWDYAPSLLMYTR++LLHLPPLLNSL+LPL  PP    S PPSLLRL    Y NKIAVSTG GSHFL+HTDNN GDSRK
Sbjct:    1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRPLSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK 118
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: XP_008873066.1 (hypothetical protein H310_08919 [Aphanomyces invadans] >ETV98191.1 hypothetical protein H310_08919 [Aphanomyces invadans])

HSP 1 Score: 77.8 bits (190), Expect = 8.800e-11
Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = 0 
Query:  247 MREEAVGLYRAGVFYPSFAFRGE-ERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDN-NCGDSRKVNWV-----------GGREEEETREGG 377
            MR EA  LY+ G  + S +   + +   K NV+  EL+GHEWD AP++L YTR ++L  P +LN L     FP       L++   AY +K+AVS G G+ + KH D     D RKV  V           GG  +  T++GG
Sbjct:   74 MRHEAERLYKEGYMFQSMSVDEQGKSFPKNNVFASELDGHEWDVAPTILHYTRSIMLQAPSMLNEL-----FPE------LQISSRAYASKLAVSLGDGASYPKHCDTAGLPDQRKVTMVYYLNPHWEPAHGGELQVYTKDGG 205
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: GAY06266.1 (prolyl 4-hydroxylase [Pythium insidiosum])

HSP 1 Score: 77.0 bits (188), Expect = 1.500e-10
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 0 
Query:  243 LCRDMREEAVGLYRAGVFYPSFAF--RGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDNN-CGDSRKVNWV 365
            + R MR EA  L+  G  +PS +    G+E + K NV+  EL+GHEW+ AP++L YTR ++L  P +LN L     FP       L++    Y  K+AVS G GS + KH DN+   D RKV  V
Sbjct:   74 VARQMRAEAERLFEEGYMFPSKSTDEHGQEMV-KPNVFATELDGHEWELAPTILDYTRSVVLQAPIVLNYL-----FPH------LKMSQRTYGTKLAVSLGGGSKYPKHCDNSGLPDQRKVTMV 186
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: GAX98777.1 (prolyl 4-hydroxylase [Pythium insidiosum])

HSP 1 Score: 77.0 bits (188), Expect = 1.500e-10
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 0 
Query:  243 LCRDMREEAVGLYRAGVFYPSFAF--RGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDNN-CGDSRKVNWV 365
            + R MR EA  L+  G  +PS +    G+E + K NV+  EL+GHEW+ AP++L YTR ++L  P +LN L     FP       L++    Y  K+AVS G GS + KH DN+   D RKV  V
Sbjct:   74 VARQMRAEAERLFEEGYMFPSKSTDEHGQEMV-KPNVFATELDGHEWELAPTILDYTRSVVLQAPIVLNYL-----FPH------LKMSQRTYGTKLAVSLGGGSKYPKHCDNSGLPDQRKVTMV 186
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: XP_009842363.1 (hypothetical protein H257_15826 [Aphanomyces astaci] >ETV68065.1 hypothetical protein H257_15826 [Aphanomyces astaci])

HSP 1 Score: 75.9 bits (185), Expect = 3.300e-10
Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 0 
Query:  247 MREEAVGLYRAGVFYPSFAF-RGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDN-NCGDSRKVNWV-----------GGREEEETREGG 377
            MR EA  L++ G  + S +         K NV+  EL+GHEWD AP++L YTR ++L  P +LN+L     FP       L++   AY +K+AVS G G+ + KH D     D RKV  V           GG+ +  T++GG
Sbjct:   75 MRREAERLFKDGYMFQSMSVDEHGNSFPKHNVFASELDGHEWDIAPTILQYTRSIMLQAPDMLNTL-----FPE------LQISSRAYASKLAVSLGDGASYPKHCDTAGMPDQRKVTMVYYLNPHWEPAHGGQLQVYTKDGG 206
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: OQS00509.1 (hypothetical protein ACHHYP_03435 [Achlya hypogyna])

HSP 1 Score: 72.8 bits (177), Expect = 2.800e-9
Identity = 49/124 (39.52%), Postives = 66/124 (53.23%), Query Frame = 0 
Query:  243 LCRDMREEAVGLYRAGVFYPSFAFRGEER-LDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDN-NCGDSRKVNWV 365
            + + MR EA  LY  G  + S +   E R   K NV+  EL G+EWD AP++L YTR ++L  P +LN L     FP       L++   AY +K+AVS G G+ + KH D     D RKV  V
Sbjct:   62 IAQAMRTEAERLYAEGHMFQSNSVDAEGRSYPKPNVFASELNGNEWDLAPTILHYTRSVMLQAPAMLNKL-----FPG------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMV 174
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: XP_012204913.1 (hypothetical protein SPRG_10391 [Saprolegnia parasitica CBS 223.65] >KDO24316.1 hypothetical protein SPRG_10391 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 71.6 bits (174), Expect = 6.300e-9
Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 0 
Query:  247 MREEAVGLYRAG-VFYPSFAFRGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDN-NCGDSRKVNWV 365
            MR EA  LY  G +F  +          K NV+  EL GHEWD AP++L YTR ++L  P +LN+L     FP       L++   AY +K+AVS G G+ + KH D     D RKV  V
Sbjct:   67 MRAEAEKLYAEGHMFQSNSVDANGNAYPKHNVFASELNGHEWDLAPTILHYTRSVMLQAPEMLNTL-----FPG------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMV 175
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: OQS04453.1 (hypothetical protein THRCLA_03317 [Thraustotheca clavata])

HSP 1 Score: 71.6 bits (174), Expect = 6.300e-9
Identity = 48/120 (40.00%), Postives = 64/120 (53.33%), Query Frame = 0 
Query:  247 MREEAVGLYRAGVFYPSFAFRGE-ERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDN-NCGDSRKVNWV 365
            MR E+  LY  G  + S +   E +   K NVY  EL G+EWD AP++L YTR ++L  P +LN L     FP       L++   AY +K+AVS G G+ + KH D     D RKV  V
Sbjct:   71 MRRESERLYAEGHMFQSNSVDAEGKSYPKLNVYASELNGNEWDIAPTILHYTRSIMLQAPEMLNKL-----FPG------LQISSRAYASKLAVSLGEGASYPKHCDTAGLPDKRKVTMV 179
[Close]
BLAST of NO20G02590 vs. NCBI_GenBank
Match: XP_008606573.1 (hypothetical protein SDRG_02753 [Saprolegnia diclina VS20] >EQC40099.1 hypothetical protein SDRG_02753 [Saprolegnia diclina VS20])

HSP 1 Score: 68.9 bits (167), Expect = 4.100e-8
Identity = 47/120 (39.17%), Postives = 63/120 (52.50%), Query Frame = 0 
Query:  247 MREEAVGLYRAG-VFYPSFAFRGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQMLLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKHTDN-NCGDSRKVNWV 365
            MR EA  LY  G +F  +          K NV+  EL G+EWD AP++L YTR ++L  P +LN+L     FP       L++   AY +K+AVS G G+ + KH D     D RKV  V
Sbjct:   67 MRAEAEKLYAEGHMFQSNSVDANGNAYPKHNVFASELNGNEWDLAPTILHYTRSVMLQAPEMLNTL-----FPG------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMV 175
The following BLAST results are available for this feature:
BLAST of NO20G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 10
Match NameE-valueIdentityDescription
EWM20493.11.000e-4375.41prolyl 4-hydroxylase [Nannochloropsis gaditana][more]
XP_005853645.16.700e-4376.27hypothetical protein NGA_0470500 [Nannochloropsis ... [more]
XP_008873066.18.800e-1137.06hypothetical protein H310_08919 [Aphanomyces invad... [more]
GAY06266.11.500e-1040.80prolyl 4-hydroxylase [Pythium insidiosum][more]
GAX98777.11.500e-1040.80prolyl 4-hydroxylase [Pythium insidiosum][more]
XP_009842363.13.300e-1036.36hypothetical protein H257_15826 [Aphanomyces astac... [more]
OQS00509.12.800e-939.52hypothetical protein ACHHYP_03435 [Achlya hypogyna... [more]
XP_012204913.16.300e-940.00hypothetical protein SPRG_10391 [Saprolegnia paras... [more]
OQS04453.16.300e-940.00hypothetical protein THRCLA_03317 [Thraustotheca c... [more]
XP_008606573.14.100e-839.17hypothetical protein SDRG_02753 [Saprolegnia dicli... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR113ngnoR113Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02590.1NO20G02590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02590.2NO20G02590.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100371g2gene9913Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02590.1NO20G02590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02590.2NO20G02590.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02590 ID=NO20G02590|Name=NO20G02590|organism=Nannochloropsis oceanica|type=gene|length=4050bp
TTTTCCAGCCTCCCCCACCCCCTCCCTGCTTTCAACCTGGCTGTGGCCAC
CCTTCCCCTTGACTTGACGCCTCTACATGCGTGTAGCAGCCACTAGCACA
GTGACAGGGACAGCCAACGCAGTGTCGACCATGTTGGGTCGCTCGCGTCC
GGTGATTGCTTTTAAATCCTCGACAAGAAGAAAAAGTAGCAGTGGTACGA
GCAGGAGCAGCACCAATAACAACACCAACAACAACAGCCGCAACAACAAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAACAACAACCT
CAGCAGCAACGGTACCAGCAGCAGTAAGAGATGGAATTCTGGCCAGGCAT
TATCCTCCTCGTCCTTGCCCGGAAGTAGCCGCAGCAGCAGCAGCAGCAGT
GACAGCCGCCTGTCTTCCTCCATTCTTTCAGGGCCCACAACGAACAGTCT
TCGCTGGCGGCTTTCCTCGTCTTCCACCTCCTTTTTCTCCTCCTCTTCCT
TCCCCTCTTCACAAGAAGCATCGGCCGAGAAGGCCAGGAAGCTCTTCTTC
GAGCAGTTGGGCTTCGGCAACGTGGTGGAGGAACGGCTCAAGGCGGAGAA
GGAGGCAATCAAGgtagggaagcaagggcggagagggaggaaagatagaa
acatggggaagtgttcgacgaggaagagataatagagacagcgtagcctc
tttatggtctccttttcctaagttagttggtagatacttacaccctgaca
aaatgatttccccccaccctgcctatctttggctctttaattcacagCTT
GGTCTCGGTCCTGACGGGCCTGGATTCGTCGTCTTTCCCCGCTTCCTCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCACCTCCTCCTCCTCCTCCCTTTCTCCCTCCCCCTCACCTTCC
TCCTCCTCCTCCTCTGCCCAGGAGGAAGATCGGCGTCTATGCCGAGACAT
GAGAGAAGAGGCGGTGGGCCTGTACAGGGCTGGGGTCTTCTATCCCTCTT
TTGCCTTTCGAGGGGAGGAAAGGTTGGACAAGAAGAATGTCTACAATTAT
GAGCTCGAAGgtacgcttaagtgggcctttcctcccgtcctccctctctg
cttgtcagttttcttcttctttacctctttcgttcctgaacgttgcgtct
gcctccctgtctctctttattctcccgaccttatacgcttctcttttctc
atcttgtttttaatttaactaaaggcgacgactgcgctctttccactcaa
acctacctacctacctacctaccttccttccttccttcctcagGTCATGA
GTGGGACTATGCTCCCTCCCTGCTCATGTATACACGGCAGATGCTCCTCC
ACCTCCCACCCCTCCTTAACAGCCTCGCCCTCCCGCTCTTCTTTCCTCCG
TCCCACCCTCCATCCCTCCTCCGCCTGCACCTCGGGGCGTACATGAACAA
GATTGCGGTCTCGACCGGTGCTGGTTCTCATTTTCTGAAGCACACGGACA
ATAACTGTGGGGATTCACGAAAGgttaattgggtgggagggagggaggaa
gaggagacgagggagggcgggaggtttggatggagggagttgtgtttgga
aaagaggcctacttaccctccttctctcccttcctcctcccccccccctt
cttctggcagCTTACTTTGGTTTACTACATGAATCCCGACTGGCGTAAAG
GCAACGGTGGCGAGCTTCGGCTGTACCCCCGGCAAACGAAAGGAGGAAGG
CCTGAAGGGGGGGAAGAGAGGGAGACAAAGTGGGTGGATGTGGCCCCGGA
GGGAGATACCTTGGTCATGTTTTTTAGCGACGAACTAGCTCATGAGGTGC
TGCCGAACGAGAGCGAGGAGGAAAGTGACCACCGTTGGACGTACACGCTG
TGGCTGGTTGAGGCAGAAAGGGAAGAGTTGGGGCGAAGGCAACGGCAAGG
GGAAAATGAGAAATGACTGTACTCGTCGAGAGAGATGGAACTAGAAATAG
ATGCAGAGATGATGGGATAATATGTTCGCTAATTTGCTTTTGATGACAGT
GAATTGTGGTCGTCTGTTTTTCATTTATGATACTGGCTATATATTCGACG
CGCCCAGGCCCCATCATCATATATGGGAGAAATGAGACGGATCTCAAAGG
AAGGTGGTGCCCACCTATAAATTCTTATGCGAGGCCCAAAAGTTCTCTTT
AGTGATTGCTGGGCTCCATGATTTATAGCATCCCTCTGACTTGTGTTATA
AGTTGAACATCAGGGAGCGTATTTGTTGCGTTTAGAGGGTTGGGAGGAGG
TAGGGTGGTATTTTTTCCCCAACTTACAATCACACACGTACACCCCTGAA
TCTCAATTGTTGCCTATATAAACGTTCACATACAATTCCCAAGTGAATAG
GCTATGAGCGGAAAGCATGACTTGTCGAGTATCAAACCAGCAGCCGTGCA
CCAACTATCACTCTGCCGCGCCCCTTTTTCCACCGCGCTTCTCCATCCTC
CCGGTTCAGGTGATGCTTACCAAGGCCTATCTAAGACCCCGATGCACGCG
CTGCGCACGACGTATTGGTATATGACGGTGTGTGCGGTAGCGACATACGG
GACAGCTAAGCACGTCATACAGCCGTCCGCCAGCTGTCGCTGCCGCCCGG
TCATCAAGTCTTGCATACAGTCAAAAACTATATATTTTGTGCCAATTCTT
GAATAATGCCCCAGCAAGGTAAGAAAGTCCCTGTTCTCTATCGCCGACCA
AACTTGATTTACCAGGTAGCCCCTGAGATGAGCGAGATGCAAAGAAATAT
AGAAACAATTCAAGTAACATGGCCACAGTGGTGGGCTATAAGAAAGGCCA
CTGAGAGGACCAAAAGAAACCAAATGGTAACGCGCATAGCAAACACTCAA
TTGTCGCTCACACGACTCGGAGCAGTCACTCGTTACTCGGTCGGAGATGA
GTGTCCAAATGTCTCCACGCCGGAGATACACGCACGAGCGGTCGGCCGAC
AAAAGGCCTATCCTATCCCCATTGATTCGTATAAGTGCTCCTCATCGCCC
TCTTGATTGTCATCTCTCCCGTACAAGCAGGCACACGAAGCTGTCGATGT
GAAAGGCGACAACTATCGATAAAAAGGGCCAATGCATTGATATGAGCCGC
TGGCCCACCCTTCCAAGAGTCGTCTGCTCTCCAGAGAGGAAGGGGTTCTC
TGCCTATTACCTGCCTCTAATGCCCCCGTCCTCTTTCAGGTGTTACCCAT
CCTCGACCTTTCTTTCAGCCTTTACCTTTCCTCCGCCACCCTCACAACGC
ATAAGCTCCCTGGGTTTGCTCTCTCGATCCTATTTCCTACTATATTGTAG
GCATATGATGAACTTGGCCATATCAGTATTCTTAGGCTGGTCTATTGATC
TATTTCTCTGCCTCCCTCTCCCTCCCCCTCTACTTCTTACCTCTTCCCCT
CCGTCGTCCCGTGGCGGCCTCGGACGCCTCCATCTTGCGCGCAAGAGTGT
CTAGATCATATGTCTACTTATATACATATATATAAGTGGAAGGGAAATGA
GTGTCGCATCAGCACCTTCTCGAAGACAGGCTCTCAGGTCGCAATTTCAG
GGAAGTCTACGTTCAAGGCGTATGGGCCCATCACCACATAGTATAATTAT
CACGGGCCCACGGCCCAGTTTAAACCCTTGATTGCGCAGACCTGGGCAAA
GGAAAAAAGTCCACGTGAAGCAGAAAGGGATTGTGGTGGTGGTTATTGCA
ATCTCTGTTGGCCATGCGTTGCATAGCATAGCATATACGTATGTAACATG
ACTTGAGAAAGATGACACGAATCCCCTGCAAGGAGTCGAGGCAAACGTCG
GGAATACAGAGATTCAAAAGCACTCTCGATACACTTGAGCGATATTTATC
AATTTGACTCGATATCGCACACAAAAGGTTATGGGGAGAGGCGTCTCTGA
TTAAGAGTGTAGCTGTATGAGGCGCTGGGGAGCCGTTTCGCCCCCTGCCG
back to top

protein sequence of NO20G02590.1

>NO20G02590.1-protein ID=NO20G02590.1-protein|Name=NO20G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MRVAATSTVTGTANAVSTMLGRSRPVIAFKSSTRRKSSSGTSRSSTNNNT
NNNSRNNNSSSSSSSSSNSNNNNNLSSNGTSSSKRWNSGQALSSSSLPGS
SRSSSSSSDSRLSSSILSGPTTNSLRWRLSSSSTSFFSSSSFPSSQEASA
EKARKLFFEQLGFGNVVEERLKAEKEAIKLGLGPDGPGFVVFPRFLSSSS
SSSSSSSSSSSSSSSSTSSSSSLSPSPSPSSSSSSAQEEDRRLCRDMREE
AVGLYRAGVFYPSFAFRGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQM
LLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKH
TDNNCGDSRKLTLVYYMNPDWRKGNGGELRLYPRQTKGGRPEGGEERETK
WVDVAPEGDTLVMFFSDELAHEVLPNESEEESDHRWTYTLWLVEAEREEL
GRRQRQGENEK*
back to top

protein sequence of NO20G02590.2

>NO20G02590.2-protein ID=NO20G02590.2-protein|Name=NO20G02590.2|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MRVAATSTVTGTANAVSTMLGRSRPVIAFKSSTRRKSSSGTSRSSTNNNT
NNNSRNNNSSSSSSSSSNSNNNNNLSSNGTSSSKRWNSGQALSSSSLPGS
SRSSSSSSDSRLSSSILSGPTTNSLRWRLSSSSTSFFSSSSFPSSQEASA
EKARKLFFEQLGFGNVVEERLKAEKEAIKLGLGPDGPGFVVFPRFLSSSS
SSSSSSSSSSSSSSSSTSSSSSLSPSPSPSSSSSSAQEEDRRLCRDMREE
AVGLYRAGVFYPSFAFRGEERLDKKNVYNYELEGHEWDYAPSLLMYTRQM
LLHLPPLLNSLALPLFFPPSHPPSLLRLHLGAYMNKIAVSTGAGSHFLKH
TDNNCGDSRKVNWVGGREEEETREGGRFGWRELCLEKRPTYPPSLPSSSP
PPSSGSLLWFTT*
back to top
Synonyms
Publications