NO20G02520, NO20G02520 (gene) Nannochloropsis oceanica

Overview
NameNO20G02520
Unique NameNO20G02520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3817
Alignment locationchr20:792530..796346 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:792530..796346 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO20G02520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR113ngnoR113Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02520.3NO20G02520.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02520.2NO20G02520.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02520.1NO20G02520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02520.3NO20G02520.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02520.2NO20G02520.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02520.1NO20G02520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02520 ID=NO20G02520|Name=NO20G02520|organism=Nannochloropsis oceanica|type=gene|length=3817bp
ACAGATAAAGACTGTATACAAGGAGAATAAGCAAAGAAACATGAAGAGAA
GTACCGCATCTATTGTCGTGGCCGCCAAAATGCCCAGCTCGCCAAGCTCC
CCTCAGATAATCACCAGgtatctgacataccttgcctgccgctctcaaca
cctcccttccgccctaacccgggtgccagcattagtacattcacagcatg
ccaccactggtgggcatcacaacatacactatttcattctagcccgtaaa
ctttactcttcacttgccacgtacccacgactgtcccaatcgctattatc
gtctgtctgatccctgcgcacaattatatattatatccctccctccttcc
ctccctccctcccttcatcttaaccctatagGCGCTCCAGCTGTGACTCC
CAAGTAGAAGCCGCCCGTCGCCATGCCACGGCCGCGGGTTTATTGGAGAG
TATCGTGGAGGGAATGCAAATCAAGGTCTCGGCCTTGCTTCTCGAGAATG
AGGAATCCCAAGAAGCGGCGCTGACGGCCGAGGTGCACATTGACGACCTC
AAGgtgaggagggaggaagaaaggaaggaagacaggaagtaagggagaga
gggagacggggagacccatgtgatatgctggttatcaaggtgggcgtgta
ctaggatacgacaggcgcattcactatccacccaccctccctccctccct
ccctccctccccccctccctccctcccttcatctcttcctcccaccttcc
ctccctagTCCTTCGTCGCCCAGCGTCAGTTCCGTATTAAGGAACTGAAG
AAGAGCAAGGAAGCTCTAGAGAAGGAATTAGAAGAGGCGATGgtaagaga
ggaggaggaagggagggatggcaattagggggtagagaggtggttccggg
acaagctggaagacggatgtatccacgccctcattcttctcccccccact
ccctctttccttcagGCCACAGTCACGACCAGGGGAACCGAGCTTCAACT
TCTAACGAAGGAGTATGCAGCCCTGCAGAATGTTCTGGAGACGGAGAAGg
tgagggagtgaaagagaaagaaaaagagggaggagagagagaagggaaga
ggaggaaaagagaggggaaagggggatggagaaggggggaggatgaaacg
gaaatacttataaatgagtacaactcacaacgtgaaattgtcgggtatgt
gtcgcttccctaaacctttttgtgcagatgacactccctccctccctccc
tccctccctcccgtagACCAGTGCCACGACCGCCCAAGCCCAGCTGGAGG
AGATGCTGGCAGCAGCGGAGAGCAGTAGAAATGAAGAGGTGGAAAAAATG
AAGAAGCAGGAACAGGAACGACGCCTGCTTCAGACGCGTTTGGCGGCAGT
GGAGGAGGAGATGAGGGGGAGGGAGGAGGAGGTGGTGAGGGGAGAGGAGG
AAAGGAGGAGGCTACAGGAGCGCATCGCGGAGATGGAGGAAGgtagataa
gagaggaaggggcggagggagggagggagagagggcaggcgggagggaaa
cgatggagaagcatgtcttctcctctttgcagacagctggctcactaact
cccctccatctcttccttctccttcccccccgtctctcccttcctcctta
aattcctagCTACTCAAGCGCTGCAAGAACGACTTACCACCACCACCGCC
CGCCTGAGTCACGTCGAGGCCGgtaggtggtgggaaagaaacctagagaa
agaaaaggagggaggaagggaggggggaagggggggagggagggagggag
gaagagaaagaggtttgactgccctccacacgctcttcactcaattgttt
cattgtccaacgccagAGGCCCTCTGTCTCCAGGAGAAGCTTACCTCTGC
CCTTATCGCGCGCCAAGACACCTCCATCCGCATTCTATCCCTGGAGGAGG
AAGCCGCAGCAACAGCAGTAATGGCAGCAACGGCAGCAGCAGAGACCATA
CGGCGACAGGAAGGGGAGGTGCAAAGCTTGGAGACAGCCAACAAAAAGGT
AAGCTCGGAGCTGTCAAAAATGAAGAAGATAACCGGCGCGGAAGACAAGC
ATGACCTCTCCCTCCTTCCTCTCCCATTCGTCGCCCAATTGCTTGTCTCT
CATTTCTCTTCTCCTTTCTTTTTTCGTCCCTCCCTCCCTCCTTTCCTCGT
CTACAGAGGGAGGGAGTATATATTACCAAACTCTGTGTCCTCAAGAGGAA
GACTGGGGTCTTGTCCTTTTCATGTCACGACGAACTTTCCCTCCCTCCCT
CTTTCTATGCTTCGTTCCATCTTTAGGGGGGCAACAGACATGCGCCTCTT
GCTGAGGCCAACTCCCTCATTCAGCGCCTCGAAGCTTCCCTCAAGAGCAA
GATGGAGACAGAGACCGCTCAGACGCAGCAGATTACAGCTGTCACTGGCA
TTGCCAAGgtatgccttgccctccttccctccctccctcgctcgctcccc
cctccatacaccaatccgtaatctgtctacccttcgctcctcctccccct
ttctccttccctatccctcagGCCCTCGAGGCACAGCTCAACGAAGAGAT
TGCCTTTCGCGTCATGCTTGAAGATCGTTACCGTGAGCTTTTTGGCCGTG
TCTCGTCCCTTAAGCACGTTGCGCCTATCTCTTCCTCTTTGACTACCTTG
TCTTCGTCCTCGCTCTCCCTTCTTCCCTCCTCCTCATCCTTGGCGAGGAT
CCCCCCTCCCCCCATGGCCCCCTCCTCTTGCCCTCGGCCTTGATCTTTCC
ATTCAACAAGAGAGCAATGGGGACAAAAATGACGCAGCCTGTGGCGCACG
GATGACGACCGGGACCCAACGAAAGGGGGATGGGAGTCAAAAAGGGAGGA
AGGAGAGAGAGGGTGTTGTGCTCTTCTTTCTCTCCTGCCAAAAAGGGAGG
AGTATATTCAAAAGAGCGGGGCACCACAATACCCTCCCAAGTCCCTACAA
TCATCATTCCATGCAACACATCGGCCCCCGAACTGAGCCCCCTCCCCCTT
CCGACCGAGAAGCACAATGAGAACAAAGAATATGGGAAAAAATCTCCGCT
GAAGAAAAGCCACTATTGCTGATACCGCAAGGAGAAATGTTGGGGTTAAG
TTCGGCAGGTGATGCGGACGCAGAGGAGCTTGCCTACCCTGTGATCTCCT
CTATGATTCCCCTCCTCCTGACCCTGTATGCGCCATCCGAGGGCTTTGCT
GGTGAAAAACCTGCCACAGCCATTTAAAACTCGGCAAAAATAAGGGAAGA
ATGTACAACAATTTATTGTTGAAGGCGTTCTCTCGTTTGTAATCCTGAGA
GGAGGCACGCTTGTGTAAACACTTGCGTTTGCATTTGTCTGCAGATAGGT
TGCACGCGATAATTTTAGGATTGTAGGAAACTACAGGAAAAACTATCGCT
ACCTCTACCCTAACATCTCCCCGGTTGAGGCAAAGCTGTAACTATGGGGT
TACCACGTACACCACACCAAACGATATCCTATCAAAGCAAGGGGTTCGAG
AAAATGGGGAAACACTTCATTATTCTGGGGTTTCAGCCCAAGTAGAAGCC
CAAATAATTACGTCTCTTTTTGATGGGCCAGACTTGGACCCTAGGATTGT
ACGCATACATGCATACATACGGCTCGATCTAATGACAGCGCTACCGCCAG
CCAGTGCAGTGATCAAGGTGACATCCTGAAGGTTTGGATGCAGTGCTCAC
AAGTACACCGTACATTATGGACGCCTTTCGCTTCTTTCGGTATTTAATGT
ACGTGTATTTATACACC
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protein sequence of NO20G02520.3

>NO20G02520.3-protein ID=NO20G02520.3-protein|Name=NO20G02520.3|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MKRSTASIVVAAKMPSSPSSPQIITRRSSCDSQVEAARRHATAAGLLESI
VEGMQIKVSALLLENEESQEAALTAEVHIDDLKSFVAQRQFRIKELKKSK
EALEKELEEAMATVTTRGTELQLLTKEYAALQNVLETEKTSATTAQAQLE
EMLAAAESSRNEEVEKMKKQEQERRLLQTRLAAVEEEMRGREEEVVRGEE
ERRRLQERIAEMEEATQALQERLTTTTARLSHVEAEALCLQEKLTSALIA
RQDTSIRILSLEEEAAATAVMAATAAAETIRRQEGEVQSLETANKKVSSE
LSKMKKITGAEDKHDLSLLPLPFVAQLLVSHFSSPFFFRPSLPPFLVYRG
REYILPNSVSSRGRLGSCPFHVTTNFPSLPLSMLRSIFRGATDMRLLLRP
TPSFSASKLPSRARWRQRPLRRSRLQLSLALPRPSRHSSTKRLPFASCLK
IVTVSFLAVSRPLSTLRLSLPL*
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protein sequence of NO20G02520.2

>NO20G02520.2-protein ID=NO20G02520.2-protein|Name=NO20G02520.2|organism=Nannochloropsis oceanica|type=polypeptide|length=336bp
MKRSTASIVVAAKMPSSPSSPQIITRRSSCDSQVEAARRHATAAGLLESI
VEGMQIKVSALLLENEESQEAALTAEVHIDDLKSFVAQRQFRIKELKKSK
EALEKELEEAMATVTTRGTELQLLTKEYAALQNVLETEKTSATTAQAQLE
EMLAAAESSRNEEVEKMKKQEQERRLLQTRLAAVEEEMRGREEEVVRGEE
ERRRLQERIAEMEEATQALQERLTTTTARLSHVEAEALCLQEKLTSALIA
RQDTSIRILSLEEEAAATAVMAATAAAETIRRQEGEVQSLETANKKREGV
YITKLCVLKRKTGVLSFSCHDELSLPPSFYASFHL*
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protein sequence of NO20G02520.1

>NO20G02520.1-protein ID=NO20G02520.1-protein|Name=NO20G02520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bp
MKRSTASIVVAAKMPSSPSSPQIITRRSSCDSQVEAARRHATAAGLLESI
VEGMQIKVSALLLENEESQEAALTAEVHIDDLKSFVAQRQFRIKELKKSK
EALEKELEEAMATVTTRGTELQLLTKEYAALQNVLETEKTSATTAQAQLE
EMLAAAESSRNEEVEKMKKQEQERRLLQTRLAAVEEEMRGREEEVVRGEE
ERRRLQERIAEMEEATQALQERLTTTTARLSHVEAEALCLQEKLTSALIA
RQDTSIRILSLEEEAAATAVMAATAAAETIRRQEGEVQSLETANKKGGNR
HAPLAEANSLIQRLEASLKSKMETETAQTQQITAVTGIAKALEAQLNEEI
AFRVMLEDRYRELFGRVSSLKHVAPISSSLTTLSSSSLSLLPSSSSLARI
PPPPMAPSSCPRP*
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Synonyms
Publications