NO20G02450, NO20G02450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_014874259.1 (PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X1 [Poecilia latipinna] >XP_014874260.1 PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X1 [Poecilia latipinna]) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-9 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 140 VVVMIPVAPQSKEARDIIRSTWGRENWVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 319
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_014874261.1 (PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X2 [Poecilia latipinna]) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-9 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 130 VVVMIPVAPQSKEARDIIRSTWGRENWVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 309
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_014874262.1 (PREDICTED: beta-1,3-galactosyltransferase 2-like isoform X3 [Poecilia latipinna] >XP_014874263.1 PREDICTED: beta-1,3-galactosyltransferase 2-like isoform X3 [Poecilia latipinna]) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-9 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 94 VVVMIPVAPQSKEARDIIRSTWGRENWVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 273
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_014874264.1 (PREDICTED: beta-1,3-galactosyltransferase 2-like isoform X4 [Poecilia latipinna]) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-9 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 94 VVVMIPVAPQSKEARDIIRSTWGRENWVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 273
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_022254990.1 (beta-1,3-galactosyltransferase 5-like [Limulus polyphemus]) HSP 1 Score: 71.6 bits (174), Expect = 8.800e-9 Identity = 56/192 (29.17%), Postives = 80/192 (41.67%), Query Frame = 0 Query: 148 IASRPRAVEARRSMRETWLKDLGD-SISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPS----FSSPSSSSPPPRCQL-IIKVDDDAQA----------PVRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEA 324 + SRP +EAR ++RETW KDL D F +G P +D++Q +F+D Y+NLS+KT A+LRW S R L ++K +D + P RN SKWY+P +P +P + GP Y++S D A SL Y E+ Sbjct: 97 VVSRPLNMEARNAIRETWGKDLKDKGAKLGFVLGFP---------------------TVDSLQRKLLQENSVHKDLIQGNFLDTYFNLSIKTLALLRWASLFCSKVKFVLKSDDDMFINSRALLKVVKTRNDTRTILGLLAHKWPPHRNKKSKWYVPPEIYPYEYYPDFLAGPAYLISGD-ATSLLYAARES 266
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_007542913.1 (PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X1 [Poecilia formosa] >XP_016522010.1 PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X1 [Poecilia formosa]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 140 VVLMIPVAPQSKEARDIIRSTWGRENRVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 319
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_007542914.1 (PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X2 [Poecilia formosa]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 130 VVLMIPVAPQSKEARDIIRSTWGRENRVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 309
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_007542915.1 (PREDICTED: beta-1,3-galactosyltransferase 2-like isoform X4 [Poecilia formosa]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 94 VVLMIPVAPQSKEARDIIRSTWGRENRVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 273
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_014827300.1 (PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X1 [Poecilia mexicana] >XP_014827301.1 PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X1 [Poecilia mexicana]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 140 VVLMIPVAPQSKEARDIIRSTWGRENRVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 319
BLAST of NO20G02450 vs. NCBI_GenBank
Match: XP_014827302.1 (PREDICTED: beta-1,3-galactosyltransferase 5-like isoform X2 [Poecilia mexicana]) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-8 Identity = 56/201 (27.86%), Postives = 84/201 (41.79%), Query Frame = 0 Query: 144 VFIGIASRPRAVEARRSMRETWLKD---LGDSISYRFFIGRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEDVVQLSFVDAYYNLSVKTAAMLRWPEQELPSFSSPSSSSPPPRCQLIIKVDDDAQAP---------------VRNPASKWYLPASSFPPSLFPPYAEGPLYILSADVARSLPYTLLEAKRE 327 V + I P++ EAR +R TW ++ LG ISY F +G+ + D++Q +F+D+Y NL++KT ML W P+ S + VD +AP +R+P SKW+L + FP +PPYA G Y+LS D LP +LEA ++ Sbjct: 130 VVLMIPVAPQSKEARDIIRSTWGRENRVLGQLISYYFLLGK-----------------SRIGNDAEPPDEQILNESKKHHDILQSNFLDSYKNLTIKTMVMLEWLTSHCPNTSYAMKIDSDTFLNVHNLVDMLLKAPRHDYMTGLVARGAAVLRDPTSKWFLSPNVFPEDSYPPYALGVGYVLSLD----LPKRILEASKK 309 The following BLAST results are available for this feature:
BLAST of NO20G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02450 ID=NO20G02450|Name=NO20G02450|organism=Nannochloropsis oceanica|type=gene|length=3305bpback to top protein sequence of NO20G02450.1 >NO20G02450.1-protein ID=NO20G02450.1-protein|Name=NO20G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=578bpback to top Synonyms
Publications
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