NO20G02300, NO20G02300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02300 vs. NCBI_GenBank
Match: CBJ33137.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.9 bits (307), Expect = 1.400e-24 Identity = 67/176 (38.07%), Postives = 98/176 (55.68%), Query Frame = 0 Query: 26 LVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPRIMAEIN 202 ++A + AL+TEA S+Y +Y KPEYQR+K+++ K +E+++ R EKDL E +D+Q + M L+V V+ V +N+ F G VVAKLPF P LV +SHR L G+DPTDCS+ F+F + G+KG++ KL+G P+ M E N Sbjct: 9 IMALSALIALLTEAYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVERKV---------KNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEAN 175
BLAST of NO20G02300 vs. NCBI_GenBank
Match: NP_001275630.1 (uncharacterized protein LOC102597373 [Solanum tuberosum] >XP_004249187.1 PREDICTED: calcium load-activated calcium channel [Solanum lycopersicum] >XP_015089238.1 PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Solanum pennellii] >XP_019071730.1 PREDICTED: calcium load-activated calcium channel [Solanum lycopersicum] >AFW90618.1 transmembrane and coiled-coil domains protein [Solanum tuberosum]) HSP 1 Score: 111.3 bits (277), Expect = 4.300e-21 Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPR 196 ++L LV ++ A+V EA+SY IY Y+ +K + K +K LE + R E LKE+ RD+ + + +V V VF LN F G VVAKLPF P++LV +SHRGLPGDD TDCSM FL+ + ++ ++ +L K LG PR Sbjct: 14 DSLTLVGISICTAIVCEAISYLLIYRTTSYKSLKSTIDKASKKLETMK---------TQEPVPSVLTKKSKTKKIDRVETSLKESTRDLSLFKFKSGFVVAVVLFMVFGFLNSLFEGKVVAKLPFIPFRLVQKMSHRGLPGDDMTDCSMAFLYFLCSISIRTNLQKFLGFSPPR 178
BLAST of NO20G02300 vs. NCBI_GenBank
Match: OWM78980.1 (hypothetical protein CDL15_Pgr003151 [Punica granatum]) HSP 1 Score: 110.9 bits (276), Expect = 5.700e-21 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPR 196 ++L +VA + A+V EA+S+ IY Y+ ++ ++ K AK LE + + R E LKE++RD+ + + +V + VF LLN F G VVAKLPF P+ +VM +SHRGLPGDD TDCSM FL+ + ++ ++ +L K LG PR Sbjct: 63 DSLTVVAISFCTAIVCEAISWLLIYRTASYKTLRSSIDKAAKKLESMK---------TDSNPAKISVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGIVMKMSHRGLPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPR 227
BLAST of NO20G02300 vs. NCBI_GenBank
Match: PKI42905.1 (hypothetical protein CRG98_036703 [Punica granatum]) HSP 1 Score: 110.9 bits (276), Expect = 5.700e-21 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPR 196 ++L +VA + A+V EA+S+ IY Y+ ++ ++ K AK LE + + R E LKE++RD+ + + +V + VF LLN F G VVAKLPF P+ +VM +SHRGLPGDD TDCSM FL+ + ++ ++ +L K LG PR Sbjct: 14 DSLTVVAISFCTAIVCEAISWLLIYRTASYKTLRSSIDKAAKKLESMK---------TDSNPAKISVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGIVMKMSHRGLPGDDATDCSMAFLYFLCSISIRTNLQKFLGFSPPR 178
BLAST of NO20G02300 vs. NCBI_GenBank
Match: XP_012751664.1 (hypothetical protein SAMD00019534_083190 [Acytostelium subglobosum LB1] >GAM25144.1 hypothetical protein SAMD00019534_083190 [Acytostelium subglobosum LB1]) HSP 1 Score: 110.5 bits (275), Expect = 7.400e-21 Identity = 60/177 (33.90%), Postives = 97/177 (54.80%), Query Frame = 0 Query: 25 WLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPRIMAEIN 202 ++VA ++++AL++E +S+ IY Y+ +K N+ K LE+ ++ S ++ E+ LK RD+ M + VGVS A+F LN F G VV KLPF P + N+SHR LPG+DPTDC+MTFL+++ +M ++ +L +LG + P ++ N Sbjct: 7 YIVAISLASALLSEGISWLLIYRTDSYKTLKANIDKMQSQLEKLKEEEASESTLKIK-------SKAKDRKAEKIEESLKTANRDLSMSNMKSMFAVGVSMIALFSYLNTVFDGKVVCKLPFEPIGFIQNISHRNLPGNDPTDCAMTFLYVLCSMFVRPNLQLILGTKPPAAKSQSN 176
BLAST of NO20G02300 vs. NCBI_GenBank
Match: XP_020888316.1 (calcium load-activated calcium channel [Arabidopsis lyrata subsp. lyrata] >EFH61137.1 hypothetical protein ARALYDRAFT_478555 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 110.2 bits (274), Expect = 9.700e-21 Identity = 64/174 (36.78%), Postives = 93/174 (53.45%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPR 196 ++L +V ++ ALV EA+S+ IY Y+ +K ++ K AK LE + + R E LKE++RD+ + + +V + VF LLN F G VVAKLPF P +V +SHRGL GDDPTDCSM FL+L+ ++ ++ +L K LG PR Sbjct: 15 DSLTVVGISICTALVCEAISWILIYRTSSYKSLKYSIDKAAKKLETMK---------TENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPR 179
BLAST of NO20G02300 vs. NCBI_GenBank
Match: XP_009615844.1 (PREDICTED: calcium load-activated calcium channel [Nicotiana tomentosiformis]) HSP 1 Score: 110.2 bits (274), Expect = 9.700e-21 Identity = 60/174 (34.48%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPR 196 + L +V ++ A++ EA+S+ IY Y +K N+ K +K LE + RFE LK+++RD+ + + +V + VF LN F G VVAKLPF P++++ +SHRGLPG+D TDCSM FL+L+ +M ++ +L K LG PR Sbjct: 13 DGLTIVGISICTAVICEAISWVLIYRTTSYNSLKSNIDKASKKLETMKTLESK--------------KPNKSKKIDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIIQKMSHRGLPGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPR 172
BLAST of NO20G02300 vs. NCBI_GenBank
Match: XP_019227625.1 (PREDICTED: calcium load-activated calcium channel-like [Nicotiana attenuata] >OIT31258.1 hypothetical protein A4A49_33328 [Nicotiana attenuata]) HSP 1 Score: 110.2 bits (274), Expect = 9.700e-21 Identity = 61/174 (35.06%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPR 196 + L +V ++ A++ EA+S+ IY Y +K N+ K +K LE + RFE LK+++RD+ + + +V + VF LN F G VVAKLPF P+++V +SHRGLPG+D TDCSM FL+L+ +M ++ +L K LG PR Sbjct: 13 DGLTIVGVSICTAVICEAISWVLIYRTTSYNSLKSNIDKASKKLETMKTLESK--------------KPNKSKKIDRFETSLKDSSRDLSLFKFKSGFVVAIVLFMVFAFLNSLFEGKVVAKLPFVPFRIVQKMSHRGLPGNDMTDCSMAFLYLLCSMSIRTNLQKFLGFSPPR 172
BLAST of NO20G02300 vs. NCBI_GenBank
Match: PAV80470.1 (hypothetical protein WR25_15973 [Diploscapter pachys]) HSP 1 Score: 110.2 bits (274), Expect = 9.700e-21 Identity = 65/189 (34.39%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPRIMAEINQQQVAETWG 211 + L +++ A AL E ++Y +Y +Y+++K M + K LE+++Q +R E+ LK RDM +M + +G++ A+ N F G VVAKLPF+P L+ LSHR L GDD TDCS FL+L+ M ++ +L KLLG R M N+QQ A +WG Sbjct: 570 DCLLIISIAFFTALAGEGITYLLVYRSDQYKKLKTEMERKTKKLEKKKQ------------ETGDATDKTARKRLERDEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFDGKVVAKLPFTPISLIQGLSHRSLIGDDMTDCSFIFLYLLCTMTIRQNLQKLLGFAPSRAM---NRQQGANSWG 743
BLAST of NO20G02300 vs. NCBI_GenBank
Match: PAV83073.1 (hypothetical protein WR25_02601 [Diploscapter pachys]) HSP 1 Score: 110.2 bits (274), Expect = 9.700e-21 Identity = 65/189 (34.39%), Postives = 97/189 (51.32%), Query Frame = 0 Query: 22 EALWLVAFAVSAALVTEALSYYFIYSKPEYQRVKKNMIKTAKALERRRQXXXXXXXXXXXXXXXXXLSNXXXXXCQRFEKDLKENARDMQKMQMLTTLLVGVSSAAVFYLLNRRFTGHVVAKLPFSPWKLVMNLSHRGLPGDDPTDCSMTFLFLMVNMGLKGSLSKLLGNEQPRIMAEINQQQVAETWG 211 + L +++ A AL E ++Y +Y +Y+++K M + K LE+++Q +R E+ LK RDM +M + +G++ A+ N F G VVAKLPF+P L+ LSHR L GDD TDCS FL+L+ M ++ +L KLLG R M N+QQ A +WG Sbjct: 4 DCLLIISIAFFTALAGEGITYLLVYRSDQYKKLKTEMERKTKRLEKKKQ------------ETGDATDKTARKRLERDEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFDGKVVAKLPFTPISLIQGLSHRSLIGDDMTDCSFIFLYLLCTMTIRQNLQKLLGFAPSRAM---NRQQGANSWG 177 The following BLAST results are available for this feature:
BLAST of NO20G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02300 ID=NO20G02300|Name=NO20G02300|organism=Nannochloropsis oceanica|type=gene|length=3680bpback to top protein sequence of NO20G02300.1 >NO20G02300.1-protein ID=NO20G02300.1-protein|Name=NO20G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=250bpback to top Synonyms
Publications
|