NO20G02290, NO20G02290 (gene) Nannochloropsis oceanica

Overview
NameNO20G02290
Unique NameNO20G02290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6791
Alignment locationchr20:688846..695636 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:688846..695636 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0035658Mon1-Ccz1 complex
Vocabulary: Biological Process
TermDefinition
GO:0010506regulation of autophagy
Homology
BLAST of NO20G02290 vs. NCBI_GenBank
Match: XP_009041149.1 (hypothetical protein AURANDRAFT_67453 [Aureococcus anophagefferens] >EGB04163.1 hypothetical protein AURANDRAFT_67453 [Aureococcus anophagefferens])

HSP 1 Score: 151.0 bits (380), Expect = 2.100e-32
Identity = 103/284 (36.27%), Postives = 140/284 (49.30%), Query Frame = 0
Query:   68 CLLAVFSLDQTLLAIQRNRYWVEVIDIHHSGREWWIDTRHGGSIAASPPPSLLAPAEVGRGKRLEGGKGDVPCSILPGGLIWSDHGGNSQDLLILTERGLDMYKVSLKRQQCRLSRAFPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDL--------------XXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFLPGGPVRLHALDNLLLLHSVEGKVTMVYDI 338
            C LAV SLD +LLA+Q +   V V +     R W ++ R G        P + A  E  R              ++PGG++WSDHGG SQDL+++T RG D+YKVS  R QC+L R   H  TR F Y PA RLL+LATGP G EL+ YFLR D    +P+FELPPP+R+P   L                                 L+P D+ L   YG          A +L +F + ++  +  RT     P GP  + A D+LLL+H  + + T V+D+
Sbjct:   95 CRLAVSSLDGSLLAVQVSETLVLVAEA-DGPRRWRVEVRGGA-------PGVGAFLE--RLAXXXXXXXXXXXRVVPGGVLWSDHGGTSQDLIVVTTRGADLYKVSSARGQCKLVRTLGHA-TRCFRYAPAHRLLVLATGPDGSELRCYFLRRDV-GDLPRFELPPPERVPPLALAGYGAGRGGTRERHAQLQRLLSRPFSTRAGGPALDPRDLLLAAAYGEPLLLHRRPGARALDVFAVRRDGCAPLRTLEPGFP-GPYGVSATDDLLLVHGAKARATAVFDV 365          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: OWZ23596.1 (hypothetical protein PHMEG_0001504 [Phytophthora megakarya])

HSP 1 Score: 95.1 bits (235), Expect = 1.400e-15
Identity = 97/387 (25.06%), Postives = 158/387 (40.83%), Query Frame = 0
Query:   29 WYDAAQDHFLILKGQMYRILPLQAEKPSQPL--------------YYDSSERDC----------------LLAVFSLDQTLLAIQRNRYWVEVIDIHHSGR-EWWIDTRHGGSIAASPPPSLLAPAEVGRGKRLEGGKGDVPCSILPGGLIWSDHG---GNSQDLLILTERGLDMYKVSLKRQQCRLSRA---FPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFL-PGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPSPSPSSSPGDPFCGGGPLAFAPSPPSEGGKEGEFE 378
            WYDA     L+L     ++  LQ +    P+               YD SE +                 +L   S+D+  LAIQR+   +EV  +H + R  +W+                L  ++ G               IL GG+IW+ H     +SQDL ++T+ GL+ ++VSLKR+ C L +    + H     F Y  +  +LL+++G R  E+  + L   +   +PK                                 ++  D+ L  LYG ++A   DT +  L L+L+ + +V+  R+ +  L PG  +    +DNLL+ HS++  V+M++DI           S GDPF    PL  +  PP     E + E
Sbjct:   24 WYDATHQSVLLLSPASLQLQQLQLDASLDPVSAATATFSPKNISTLYDFSEPEASGDRGDAIKQRNLTLIMLLQLSVDRQFLAIQRSD--IEVQVLHRTTRASYWV----------------LCKSKAGN-------------RILHGGVIWNTHSIKVTSSQDLFLVTKLGLEHHRVSLKRRNCILHKTVGLYVHE----FWYAASHGVLLVSSGSRANEIVPFLLHGTNVEKLPKL---------------------------VFSTAVSKQDLRLVTLYGDIYAVYSDTRSTKLLLYLVGRSKVACVRSLNLMLPPGTALEYSVVDNLLVCHSLDFNVSMLFDI-------KCDGSIGDPF--SAPLPISSRPPGYLSSESKHE 339          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: GAX98382.1 (Hypothetical protein PINS_006240 [Pythium insidiosum])

HSP 1 Score: 93.6 bits (231), Expect = 4.000e-15
Identity = 99/365 (27.12%), Postives = 149/365 (40.82%), Query Frame = 0
Query:   29 WYDAAQDHFLILK--GQMYRILPLQAEKP----------SQPLYYDSSERDCL-LAVFSLDQTLLAIQRNRYWVEVIDIHHSGREWWIDTRHGGSIAASPPPSLLAPAEVGRGKRLEGGKGDVPCSILPGGLIWSDH---GGNSQDLLILTERGLDMYKVSLKRQQCRLSR---AFPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFL-PGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPSPSPSSSPGDPFCGGGPLAFAPSPPSEGGKE 374
            W+DAA D  L+     Q    LPL    P             LY  ++  + L L   S+D+  LA+Q++   V+V+ +  +G   WI            P S         G R           I+  G++WS H      SQDL +LT+ G++ Y+VS KR  C L R    F H     F Y  A  +L+++TG R  EL  + L   +   +P+     P R                           P ++ L  LYG +FA   D  +  L L+L+ + +VS  R+    L PG  +    +DNLL+ H VE  V++ +D+          S   +PF    P++ AP P  +G  E
Sbjct:   44 WHDAAHDSLLVFSPTTQTVEELPLTPRAPXTTTRATAASPAALYRGAAVHEPLALLRLSVDRGFLAVQKSDIEVQVLSL-ATGESHWI---------VCKPTS---------GNR-----------IVSDGVVWSTHATGSQRSQDLFLLTKLGIEQYRVSRKRGDCALHRTIAVFVHT----FWYSAAHSVLIVSTGARANELVPFQLCASNVEKLPRLVFSTPVR---------------------------PRELFLASLYGELFAVYSDARSMRLLLYLIGRSKVSCVRSLHVELPPGTALEFSVVDNLLVCHGVEFNVSLFFDV-------KCESELHEPFSHPLPISLAP-PERDGPSE 339          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: POM58211.1 (Hypothetical protein PHPALM_37174 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 83.6 bits (205), Expect = 4.200e-12
Identity = 71/250 (28.40%), Postives = 110/250 (44.00%), Query Frame = 0
Query:  135 KGDVPCSILPGGLIWSDH---GGNSQDLLILTERGLDMYKVSLKRQQCRLSRA---FPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFL-PGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPSPSPSSSPGDPFCGGGPLAFAPSPPSEGGKEGEFE 378
            K  V   IL GG+IW+ H     +SQDL ++T+ GL+ Y+VS KR+ C L R    + H     F Y  +  +LL++ G R  E+  + L   +   +PK                                 +   D+ L  LYG M+A   DT +  L L+L+ + +V+  R+ +  L PG  +    +DNLL+ HS++  V+M +DI           +  DPF    PL  +  PP     E + E
Sbjct:  130 KSKVGNRILHGGIIWNTHSVKAMSSQDLFLVTKLGLEHYRVSSKRRNCTLHRTVGLYVHE----FWYAASHGVLLVSCGSRANEILPFLLHGTNVEKLPKL---------------------------VFSTSVTKHDLHLVTLYGDMYAVYSDTRSTKLLLYLVGRTKVTCVRSLNLMLPPGTALEYSVVDNLLVCHSLDFNVSMFFDI-------KCDGNISDPF--SAPLPISSRPPGLSPPETKHE 339          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: XP_009516112.1 (hypothetical protein PHYSODRAFT_468325 [Phytophthora sojae] >EGZ28837.1 hypothetical protein PHYSODRAFT_468325 [Phytophthora sojae])

HSP 1 Score: 83.2 bits (204), Expect = 5.500e-12
Identity = 65/227 (28.63%), Postives = 106/227 (46.70%), Query Frame = 0
Query:  142 ILPGGLIWSDHG---GNSQDLLILTERGLDMYKVSLKRQQCRLSRA---FPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFL-PGGPVRLHALDNLLLLHSVEGKVTMVYDI-----LSSP---PSPSPSSSPGDP 354
            IL GG+IW+ H     +SQDL ++T+ GL+ Y+VS KR+ C L ++   + H     F Y  +  +LLL++G R  E+  + L       +PK                                 ++  D+ L  LYG M+    DT +  L L+L+ + +V+  R+ +  L PG  +    +DNLL+ HS++  V++ +DI     +S P   P P  +  PG P
Sbjct:  138 ILHGGVIWNTHSVKPTSSQDLFLVTKMGLEHYRVSSKRRSCALHKSVGLYVHE----FWYAASHGVLLLSSGSRANEIVPFLLHGAYVEKLPKL---------------------------LFSTAVSKQDLHLVSLYGDMYVVYSDTRSTKLLLYLVGRTKVTCVRSLNLLLPPGTALEYSVVDNLLVCHSLDFNVSLFFDIKCDGNISDPFSAPLPISARPPGHP 333          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: XP_008895580.1 (hypothetical protein PPTG_04966 [Phytophthora parasitica INRA-310] >ETN19762.1 hypothetical protein PPTG_04966 [Phytophthora parasitica INRA-310])

HSP 1 Score: 82.4 bits (202), Expect = 9.300e-12
Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 0
Query:  142 ILPGGLIWSDH---GGNSQDLLILTERGLDMYKVSLKRQQCRLSRA---FPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFL-PGGPVRLHALDNLLLLHSVEGKVTMVYDI-----LSSP---PSPSPSSSPGDPFCGGGP 360
            IL GG+IW+ H     +SQDL ++T+ GL+ ++VS KR+ C L R    + H     F Y  +  +LL+++G R  E+  + L   +   +P+                                 ++  D+ L  LYG ++    DT +  L L+L+ + +V+  R+ +  L PG  +    +DNLL+ HS+E  V+M +DI     +S P   P P  S  PG    G  P
Sbjct:  135 ILHGGIIWNTHSLKATSSQDLFLVTKLGLEHHRVSSKRRSCALHRTVGLYVHE----FWYAASHGVLLVSSGSRANEVVSFLLHGTNAEKLPEL---------------------------VFSTSVSKQDLHLVTLYGDLYVVYSDTRSTKLLLYLVGRAKVTCVRSLNVMLPPGTALEYSVVDNLLVCHSMEFNVSMFFDIKCDRSISDPFSAPLPISSRPPGQKHDGAVP 336          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: KUF79250.1 (hypothetical protein AM587_10009503 [Phytophthora nicotianae] >KUG00321.1 hypothetical protein AM587_10009412 [Phytophthora nicotianae])

HSP 1 Score: 82.4 bits (202), Expect = 9.300e-12
Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 0
Query:  142 ILPGGLIWSDH---GGNSQDLLILTERGLDMYKVSLKRQQCRLSRA---FPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFL-PGGPVRLHALDNLLLLHSVEGKVTMVYDI-----LSSP---PSPSPSSSPGDPFCGGGP 360
            IL GG+IW+ H     +SQDL ++T+ GL+ ++VS KR+ C L R    + H     F Y  +  +LL+++G R  E+  + L   +   +P+                                 ++  D+ L  LYG ++    DT +  L L+L+ + +V+  R+ +  L PG  +    +DNLL+ HS+E  V+M +DI     +S P   P P  S  PG    G  P
Sbjct:  135 ILHGGIIWNTHSLKATSSQDLFLVTKLGLEHHRVSSKRRSCALHRTVGLYVHE----FWYAASHGVLLVSSGSRANEVVSFLLHGTNAEKLPEL---------------------------VFSTSVSKQDLHLVTLYGDLYVVYSDTRSTKLLLYLVGRAKVTCVRSLNVMLPPGTALEYSVVDNLLVCHSMEFNVSMFFDIKCDRSISDPFSAPLPISSRPPGQKHDGAVP 336          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: OAE18579.1 (hypothetical protein AXG93_1923s1350 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 82.4 bits (202), Expect = 9.300e-12
Identity = 90/345 (26.09%), Postives = 137/345 (39.71%), Query Frame = 0
Query:  146 GLIWSDHGGNSQDLLILTERGLDMYKVSLKRQQCRLSRAFPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQV---SLFRTYSYFLPGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPS----PSPSSSPGDPFCGGGPLAFAPSPPSEGGKEGEFEGTSACPPIEDFYDPRHCIFPSADGGWMLHMGGGGGREGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVGIRLWRLRINLKAVAASRTKVPSLFPFLLRR 484
            GL W+D    + DL+++T  GL++Y + L R   +L  A    +  +++Y   SRL+LLA+G + + L GY           +F      RLP+FD+                   L P DI +  +YG ++   VD  A  L L+   ++ V        YS       V L  +DN+LL+H ++ KV ++YDILS P S    P P    G P  G     F  +  S G    E +        ED    +  +F + D                                                   V   LW++R++L+A+AAS + +PSL  FL RR
Sbjct:  128 GLFWTD--CPTCDLVLVTSSGLELYSLYLGRNGLKLLEA-KRSNVSWYVYTHESRLVLLASGMQCKTLSGY-----------QFSAGGIVRLPKFDV-------LMTKAEVNRKPVLAPEDIRIATMYGRLYCLQVDRVAMQLNLYRFYRDAVVPQGCLPIYS-----RNVALSVVDNVLLIHEIDSKVVLLYDILSEPKSTISAPLPLLLRGAPLHGSSSRGFETANTS-GNTSSEPDLLGNLTSAEDQIYDKGWVFVNPD----------------------------------------------IVLDHVHGLLWKIRLDLEAIAASSSDIPSLLSFLQRR 399          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: PTQ48531.1 (hypothetical protein MARPO_0005s0167 [Marchantia polymorpha])

HSP 1 Score: 82.4 bits (202), Expect = 9.300e-12
Identity = 90/345 (26.09%), Postives = 137/345 (39.71%), Query Frame = 0
Query:  146 GLIWSDHGGNSQDLLILTERGLDMYKVSLKRQQCRLSRAFPHPDTRFFLYHPASRLLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQV---SLFRTYSYFLPGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPS----PSPSSSPGDPFCGGGPLAFAPSPPSEGGKEGEFEGTSACPPIEDFYDPRHCIFPSADGGWMLHMGGGGGREGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVGIRLWRLRINLKAVAASRTKVPSLFPFLLRR 484
            GL W+D    + DL+++T  GL++Y + L R   +L  A    +  +++Y   SRL+LLA+G + + L GY           +F      RLP+FD+                   L P DI +  +YG ++   VD  A  L L+   ++ V        YS       V L  +DN+LL+H ++ KV ++YDILS P S    P P    G P  G     F  +  S G    E +        ED    +  +F + D                                                   V   LW++R++L+A+AAS + +PSL  FL RR
Sbjct:  128 GLFWTD--CPTCDLVLVTSSGLELYSLYLGRNGLKLLEA-KRSNVSWYVYTHESRLVLLASGMQCKTLSGY-----------QFSAGGIVRLPKFDV-------LMTKAEVNRKPVLAPEDIRIATMYGRLYCLQVDRVAMQLNLYRFYRDAVVPQGCLPIYS-----RNVALSVVDNVLLIHEIDSKVVLLYDILSEPKSTISAPLPLLLRGAPLHGSSSRGFETANTS-GNTSSEPDLLGNLTSAEDQIYDKGWVFVNPD----------------------------------------------IVLDHVHGLLWKIRLDLEAIAASSSDIPSLLSFLQRR 399          
BLAST of NO20G02290 vs. NCBI_GenBank
Match: GBG28667.1 (Mic1 domain-containing protein DDB_G0286707 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 82.0 bits (201), Expect = 1.200e-11
Identity = 87/319 (27.27%), Postives = 132/319 (41.38%), Query Frame = 0
Query:   29 WYDAAQDHFLILKGQMYRILPLQ-AEKPSQPLYYDSSERDCLLAVFSLDQTLLAIQRNRYWVEVID-IHHSGREWWIDTRHGGSIAASPPPSLLAPAEVGRGKRLEGGKGDVPCSILPGGLIWSDHGGNSQDLLILTERGLDMYKVSLKRQQCRLSRAFPHPDTRFFLYHPASRLLLLATGPRGRELKGY-FLRYDSRASMPKFELPPPDRLPRFDLXXXXXXXXXXXXXXXXXXXLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSLFRTYSYFLPGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPSP 345
            WYD+A +  +++K  +Y  L LQ   K S PL +  +    L   FS  +  LAIQRN   +EV+D +  +        + G  +       L   A+V +  RL+    D+PC  +          G     L  TERG D          C+L     H     F + P  +LL+LATG  G E++ Y F        + KF LP   +LP                           ++ L +LYG+M+A      +  L ++ L +E  S  R        G V L  +DNL+ +H++E + T +YDIL+    P
Sbjct:   31 WYDSANEQLVLMKKNVYYTLALQFGAKVSPPLNFVHA-GPVLDVKFSPCKRFLAIQRNDTTIEVVDLVLATETRLTCRPKRGNLVLRGGVLWLQREAQVSKSTRLDAEAEDLPCLCIVA------RSGLEVHRLPNTERGED---------SCKLLGTIKH-TIHCFWHLPEQQLLVLATG-NGTEMRPYQFQSGHLPIKLAKFFLP---KLPA------------------------ARNLLLTKLYGSMYAIETLNASRRLNVYRLGRESSSRVRELE-LSSSGSVYLSIVDNLICVHNMEARFTSIYDILAETSLP 303          
The following BLAST results are available for this feature:
BLAST of NO20G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009041149.12.100e-3236.27hypothetical protein AURANDRAFT_67453 [Aureococcus... [more]
OWZ23596.11.400e-1525.06hypothetical protein PHMEG_0001504 [Phytophthora m... [more]
GAX98382.14.000e-1527.12Hypothetical protein PINS_006240 [Pythium insidios... [more]
POM58211.14.200e-1228.40Hypothetical protein PHPALM_37174 [Phytophthora pa... [more]
XP_009516112.15.500e-1228.63hypothetical protein PHYSODRAFT_468325 [Phytophtho... [more]
XP_008895580.19.300e-1228.33hypothetical protein PPTG_04966 [Phytophthora para... [more]
KUF79250.19.300e-1228.33hypothetical protein AM587_10009503 [Phytophthora ... [more]
OAE18579.19.300e-1226.09hypothetical protein AXG93_1923s1350 [Marchantia p... [more]
PTQ48531.19.300e-1226.09hypothetical protein MARPO_0005s0167 [Marchantia p... [more]
GBG28667.11.200e-1127.27Mic1 domain-containing protein DDB_G0286707 [Auran... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02290.1NO20G02290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595096gene_6456Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02290.1NO20G02290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02290 ID=NO20G02290|Name=NO20G02290|organism=Nannochloropsis oceanica|type=gene|length=6791bp
ATGTCTTCACCTCCCCTCCATCATCACTTCCTTGAGCTCGTGGACCCGCC
CCATCCGTTGCCTTTACGGGAATATGACCAGgtaaggcagcggtgaggat
ggggaggggagctgtcagagggatgaccgagcttgcatgcgcttaggacc
gttcaaccaccccctcactccctccttttcctcccttcccccctctcctc
ctgtcgccctgcagTTCTGGTATGATGCCGCGCAAGACCACTTCCTTATC
CTCAAAGGGCAAATGTACCGAATTTTGCCGCTTCAGGCCGAAAAGCCTTC
GCAGCgtacgtataaggaggggggggggggggagaatgccgatgatgatg
tggatgtggttgttgatgactgcgaagtgtgggcctgtggggctctgttt
gtgtgcatatgtatatacatggcggagtatcgaaggctgcatgtgagcac
gggtgtgtagatgctccagatgccccgtgatctgtcacatgtagtcctca
acacccagacggctggctcgaagcatatctttaaaccctccctccctccc
tccctccctccctccgtcctcctttacctcccctcagCCCTTTATTACGA
CAGCAGCGAGCGCGATTGCTTGCTGGCTGTCTTTTCCCTGGACCAGACAT
TGCTCGCCATCCAGCGGAACCGTTACTGGGTGGAGgtcaggaaggaggga
gggagggagggagggaggggagatctgatgggcgggaaggaaggaaatgt
tcttgcacgttatctgcgaacttgttctcaccggggctcccttctctccc
cccctctctccatccgcccgtccctagGTCATTGACATCCACCACAGCGG
GCGGGAATGGTGGATCGACACCCGGCACGGCGGCAGCATCGCCGCCTCCC
CCCCTCCCTCCCTCCTTGCCCCCGCTGAAGTAGGGAGGGGTAAAAGGCTG
GAAGGGGGGAAGGGAGACGTGCCCTGCTCCATCCTTCCTGGTGgtaagta
cacttaatgcttttcctacaccagtccgatttcccctttctcgactctcc
ttgtctcttcccacccctaattcttcttccctccctccctccgtctctcc
ctccgtccctccctccgtccctccctccgtccctccctccctacagGCCT
TATCTGGAGCGACCACGGCGGGAACTCTCAGGACCTTCTGATATTAACAG
AGAGAGGCTTGGATATGTACAAGgtagggagggcgggcgccagagagggc
aggagggcgggcgccagagagggcgggagggcgggagggcgggagggtgg
gagaggacacaatggaatcggatggattgtttcagactttcgtgtttttt
taaacctctcccgtcctccctccctccctccctccctcccgtcctcagGT
CTCCCTGAAGCGTCAGCAATGCCGACTCTCTCGGGCTTTTCCCCACCCCG
ACACACGCTTCTTCCTCTACCACCCGGCCTCCCGCCTCCTCCTCCTGGCC
ACTGGTCCTCGCGGGAGGGAGCTCAAAGGCTACTTCCTTCGgtaccctcc
ctccctccctccctccctccctccttccctcccttcctccctccgtctgc
ccccccatatcctccctccctctgtctatccctccctcaccttccattac
cttctttatctccctccctccctccctccctcaccctcctatgccctccc
caaccttccgggatcctccctccctccctccctccctccctccctctctg
gggtccacagGTACGACAGTAGAGCCTCCATGCCAAAGTTCGAGCTGCCT
CCGCCCGACCGGCTGCCACGgtgagaaggagggagggagggctggctggc
tggctgaaagctgcgagtcgacgatggcatatgattatagcatataatac
ttcctccttccttccttccttccttccttccctccctccttccctccctc
ctcccctccttccctccttccattcccttcagGTTCGATCTTCTTCCCCC
ACCCTCCTCCTCTTCCTCCCCCTCTTCCTCCCCCTCTTCCTCCTCCTCCC
TCAATCCCCTGGACATTTCCCTCCACCGGCTGTACGGTGCCATGTTCGCC
GCTGTCGTCGACACGACCGCGGGGTCCCTCGCTCTCTTTCTATTAGAGAA
GGAGCAGgtcgggagggagggagagagggagggagggagggagggcaggc
gggtttgaaagtgcgtttcctccaggttaatcacgtatcctctcatgagt
aaatgccatgacctcctctttttccctccccccattcctccctccccgcc
cagGTCTCCCTCTTTCGTACCTACTCCTACTTCCTACCCGGCGGGCCTGT
CCGCCTTCATGCCCTTGACAACCTCCTGCTGCTGCACAGCGTAGAGGGGA
AGgtagggagggagggatggagggaggaaaaagaggcaagggaacgaggg
taaggagagcgcaaaggaatctctgaacaaagaaggactcggatccctcc
ctcactcactccgtccctcactcgctggttctcgctccaatgcccgcctc
agGTAACCATGGTCTACGACATCCTCTCCTCCCCTCCTTCCCCCTCGCCC
TCCTCCTCGCCCGGAGATCCTTTTTGTGGTGGCGGCCCTTTGGCGTTTGC
CCCCTCCCCCCCGTCTGAGGGAGGGAAGGAGGGCGAATTTGAAGGCACCT
CTGCTTGTCCTCCTATTGAAGACTTCTACGATCCTCGgtaactcttctct
tccccccctccctcccttcatccctcttttccctcattcccttcttctct
tcctttccatcctttccgtcctctccctccattttttccttttcttccct
tttctcgatggtctttcatagcctccctcccccactcctttccaccacgg
tttccctccattcatttcttcctttgccttaactcgatgggcttgggttg
tgtattgagtatgggtattgacttccaaccctcgactcaccctccgtagt
ggcggtgatggaattaaccctcaaaatttcctctgtagtggcgatgatgg
aatataacctcaaccctcgctctgtagtggcggtgatggaattaaccctc
aaccctccctctttccttcctcttcagGCATTGCATTTTCCCGTCCGCGG
ATGGCGGGTGGATGCTGCATATGGGGGGAGGAGGAGGGAGGGAAGGAGAG
AGGGGGCTGCAGGGGATAGAGGAAGAAGGAGGACAAAATGGAGGAGGAGG
ACAAAGAGGAGGAGGAGGAGGACAAGGTGGAGGAGGAGGACGAGGAGGAA
GGGAAGTAGGGATCCGACTGTGGCGGCTTCGCATCAACCTGAAAGCAGTT
GCAGCCAGTCGAACAAAGgcaagtatacactgttgactgaaaggggagaa
tcgaggaggggcttcacgggtgtgttcgtgtgtgtttagggggagggttt
gaatgcaggatgttgatgattgtttgtgccatgttctttctaaccatctt
cagctcttccctcttactcaccccactcgcccttatgtgtgccattgctg
tttctccacccacatgcacttcctcttcctttccagGTGCCTTCGCTCTT
TCCTTTCCTCCTCCGCCGCGGTCGTGTCTACCCCTCCCTTGTGCGACCTT
CATCAAATACGGGGGAGGAAACAGCAAGGCTGGTGGAAAATGACACAGgc
aagagtttatatgcatatatatatgtgtgtatatatacatgtttgtgtat
atgtgtgtgtatgtatgctctttcccttccgcactcatcaccccctcttc
gtcactccctcttctcctcttccccttgattcttgatccgatccgtcttg
tgggaaaagcagGCACACTGGCCCATGCCGTCCTTCTCCACGAATACTAC
CGTCGCATCGCCGAAAGTCTTCCTCTTTTCTCGCCCTCCCGCCCGCCCTC
CCTCCTCCCCTCCCTCCGTCTCCCCCTGGACTTTGATGACGTTTCGACCA
TGATGCgtctctgtctttcttcctcccttgctgccccccccctctctctc
ggtctgcgtatggcagcgacggtggagggagggagggaccgaagatgggg
gggagggaaggagagaaggaaatttgtcggctggcgcctgaagGAGACAT
TTGTATAGGGGAAGAGGAACTACTCCGTCAGgtacagagggagtgaaaga
gaggggaagaaggccagggaggagggagaggaagatacataatatcagaa
gggaagatgttatattagggggagagagggttataaacttgattaggagg
agagtgaggtcacgtattatataagagggggtaattgtatcatattagat
cacggggagatggtttggtaatatatattattaggagcagaggattccgt
caaatgtgagttgctcacgactgaccttctacaacagATTTTTCTACCCC
TTGTCACGACAGCCCTTTCCCCCCTTTCCTCCCCCCGATCCACGTCTGCA
CCCTCCCTGGTCTACCTTTCCCACGTAATCCTCCACCATATCGGCCTGCT
GCAGACCGCCGTGCCTCCCTCCCTCCCTCCGTCCCTCCATTCTTTTCAAG
GCGGAGGAGAAGCGAGAGACAAAGCTACAAATGTTGTCCCTCCGGCACTG
GTCGTCCTCGTCTTGCGCCTGCTCTTTCACCTGgtaaagctcgctttctt
tctttcaaagagggagatgagagacaggagagggctcgatggggaaagac
agtataaggattggatgcagagagaggaccctgcgcccccttaatatttt
gccaccatcatcgccaccactcatatcacacctttcgtatgccctctagc
aaccccatgacttttgcggccactcacaattttttcatgcctttctcccc
gcccacactccagCAACGAATCGACCGCGTCGTCAGCTTTTTGCGCACAC
AGCAGgtaaggaaggcttgcgggtgtgtctgcccatccccccttctcctc
ctcctcctcctcctcctcctccccctcctccttctcctcctccttctcct
cctcctcctcctcctcctcttccttctcctcctccttctctttctcaacc
tcctcctcctccttctcctctccctccttcatctcctcctctttctcctc
ctcctattaatctgcttcccttttttgcgtgccttgcatccttttcctcc
cttttctctttttcgcccgacttttgcgcttgtcaactccttcctcccta
ccttgtctgagccttctattccacccttcctttcctcttccctccctctc
cgcacttcaatcaacaccgcctgcccccggctgcccgattgatcattcat
attaacagGGAGCGGTGGACTCCCATGAAGTAGTCAACCTGCTTCTCGCG
TTTCTGGCCCAAGAGGGAGAAGGAAGGAAGACCGAAGAATTGGAATACGA
GACAAAGGAGCTTAGACAACTCGTCCGGGACATGCTTTTCCGTCTGCGGC
GGATGGATCTACTCGTGCTGCAGCTGCTCCAGgtacggtctgcctgcatt
ttccaacctcccctccccgcttcttttccctgttctcttttcccttgtcc
gacagctactcgtagtaattgtttcatttaaccaaacactgttattcgtc
gtggcttacataaccccctccctccccgccctctccagGAGGGTCGGCTG
GTCGAAGCCTTAAGGACCCTTCGGACCATGTCACAAGAAGTCAAGAGCAG
GAGTACAATGGCATCACCTTTTCCTTTGCTCGCGGAGGTATGTCTATTTT
TATATGATAAAATATGCAGCATATATACGCCCTCGTCGAAATTTCCTGCC
CCTCTTTGTCTTCCCCTCTGTGCCGGTCGTTCCCCTCGCGCATTTTTTTG
GGGCCTAATTCTTGTGTCTGGGATATCTCACGCAGTCGCTTCTACCTTCA
CCTATTCTCCTCTCCCAGGGACCTCTAATACAGGCCCTGGTCAACGCCAC
CAATATCCGTCTACGCGAACTCTCCTCGTCCCCTACCTCCGCCGTGTCAT
CCACTCCATCCTTCCCTCCCTCCTCCATGCCCACGGCTGGCGCCTCGCAT
CGCGCCGCCATTTGCTACCTCCTGCACGAGTGGCTCCGGTAAGCTCCAAT
TTCGAAAAAAATCGATCTCGCGCACAAAAATTATCAGAGGAGGAGCTACG
AAAATATATACAGAGAGAATATAGACATCTTCTTCTTTCCCTTCGCCTTT
CCTCCTTCCTTCGTGACCTTATATCGTGGCGGCCTTCGTCCTCATCGTTA
TTTCCCGCTCTTAATTTTTATTTATTTATTCTTACTTCCTCTCCCCCTCC
CTCCTTCCCTCCCTCCTTTCCTCCAGGTCTCTTCAGCCGAAGCTATTTCC
CATTCCACAGGCCGCGTCCGACTCGGCGAATGAGGAAAGGAATGAGGGCG
AGGGGGAGGAGAAGAAGGAACGTTTCGTGGACGTTATCCCTGCTTTCCCC
TTTGACACCTCTCACTTCTCGCCTCCGTCCGTGGCTAGCACGCTGGCAGA
GCAGATTTATGGGTATGCCCGTAGTAGCAACGAAGAAGATGGATAATGCT
GTGTGCAAGAGGGAGTCAGTCCACAGGGGTAATATTTATCTCACATTTAA
AGTGTTGGGTGGATTTCGCACAAGAAGATCGGAGGAACGGGCGATAATTG
GGGAAGTGTCCCGCATTACAATCAAATCAACAAGACCAAGGGAAAAGGGT
TGAGATGAAAGAAAAAGAAGAAGAAACTTGTTGTTGACTTA
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protein sequence of NO20G02290.1

>NO20G02290.1-protein ID=NO20G02290.1-protein|Name=NO20G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1079bp
MSSPPLHHHFLELVDPPHPLPLREYDQFWYDAAQDHFLILKGQMYRILPL
QAEKPSQPLYYDSSERDCLLAVFSLDQTLLAIQRNRYWVEVIDIHHSGRE
WWIDTRHGGSIAASPPPSLLAPAEVGRGKRLEGGKGDVPCSILPGGLIWS
DHGGNSQDLLILTERGLDMYKVSLKRQQCRLSRAFPHPDTRFFLYHPASR
LLLLATGPRGRELKGYFLRYDSRASMPKFELPPPDRLPRFDLLPPPSSSS
SPSSSPSSSSSLNPLDISLHRLYGAMFAAVVDTTAGSLALFLLEKEQVSL
FRTYSYFLPGGPVRLHALDNLLLLHSVEGKVTMVYDILSSPPSPSPSSSP
GDPFCGGGPLAFAPSPPSEGGKEGEFEGTSACPPIEDFYDPRHCIFPSAD
GGWMLHMGGGGGREGERGLQGIEEEGGQNGGGGQRGGGGGQGGGGGRGGR
EVGIRLWRLRINLKAVAASRTKVPSLFPFLLRRGRVYPSLVRPSSNTGEE
TARLVENDTGTLAHAVLLHEYYRRIAESLPLFSPSRPPSLLPSLRLPLDF
DDVSTMMRDICIGEEELLRQIFLPLVTTALSPLSSPRSTSAPSLVYLSHV
ILHHIGLLQTAVPPSLPPSLHSFQGGGEARDKATNVVPPALVVLVLRLLF
HLQRIDRVVSFLRTQQGAVDSHEVVNLLLAFLAQEGEGRKTEELEYETKE
LRQLVRDMLFRLRRMDLLVLQLLQEGRLVEALRTLRTMSQEVKSRSTMAS
PFPLLAEVCLFLYDKICSIYTPSSKFPAPLCLPLCAGRSPRAFFWGLILV
SGISHAVASTFTYSPLPGTSNTGPGQRHQYPSTRTLLVPYLRRVIHSILP
SLLHAHGWRLASRRHLLPPARVAPVSSNFEKNRSRAQKLSEEELRKYIQR
EYRHLLLSLRLSSFLRDLISWRPSSSSLFPALNFYLFILTSSPPPSFPPS
FPPGLFSRSYFPFHRPRPTRRMRKGMRARGRRRRNVSWTLSLLSPLTPLT
SRLRPWLARWQSRFMGMPVVATKKMDNAVCKRESVHRGNIYLTFKVLGGF
RTRRSEERAIIGEVSRITIKSTRPREKG*
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Synonyms
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