NO20G02160, NO20G02160 (gene) Nannochloropsis oceanica

Overview
NameNO20G02160
Unique NameNO20G02160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3858
Alignment locationchr20:644819..648676 -

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Properties
Property NameValue
DescriptionCalcium-binding protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:644819..648676 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO20G02160 vs. NCBI_GenBank
Match: EWM22015.1 (calcium-binding protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 424.5 bits (1090), Expect = 4.700e-115
Identity = 203/264 (76.89%), Postives = 229/264 (86.74%), Query Frame = 0
Query:   31 LPLTSAFLRPSLVPPTHRSFNPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHK 295
            L  +SAFLR +   P  R+F PSPLEAM+ R+TSAN+LAPIFKR+DSNGTRES+F+++YL RH+++ID L+G      + G+D  +LPDVLCVQEFW QG  +R+LY  RLCEE+GYKLVEVERTN RGDGVACFVSPRVELVD RPI FLDCGDRVGLLCRVRV+DEE G EG E+EQCD+LVVNTHLLFPHN YSSRIRLREVQKILGFIDKYKHDE+LGPLPI+F GDLNGSPKGQV EYLRHKGFVSAFEAYNRPRAPHK
Sbjct:  121 LTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLG-----SRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAG-EGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNRPRAPHK 378          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_005852620.1 (hypothetical protein NGA_0713500, partial [Nannochloropsis gaditana CCMP526] >EKU23210.1 hypothetical protein NGA_0713500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 396.7 bits (1018), Expect = 1.100e-106
Identity = 189/248 (76.21%), Postives = 215/248 (86.69%), Query Frame = 0
Query:   34 TSAFLRPSLVPPTHRSFNPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVS 282
            +SAFLR +   P  R+F PSPLEAM+ R+TSAN+LAPIFKR+DSNGTRES+FE++YL RH+++ID L+G      + G+D  +LPDVLCVQEFW QG  +R+LY  RLCEE+GYKLVEVERTN RGDGVACFVSPRVELVD RPI FLDCGDRVGLLCRVR++DEE G EG E+EQCD+LVVNTHLLFPHN YSSRIRLREVQKILGFIDKYKHDE+LGPLPI+F GDLNGSPKGQV EYLRHKGFVS
Sbjct:   67 SSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFEEQYLRRHSRVIDRLLG-----SRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRLRDEEAG-EGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVS 308          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: GAQ86146.1 (calcium-binding endonuclease [Klebsormidium nitens])

HSP 1 Score: 264.2 bits (674), Expect = 8.200e-67
Identity = 178/503 (35.39%), Postives = 259/503 (51.49%), Query Frame = 0
Query:   48 RSF---NPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFV-SPRVELVDSRPILFLDCGDRVGLLCRVRVKD-EEGGREGEE---------EEQC--DVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSA---VRAAFKVF----DSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFV------DRFWELDLYQKEDGNFV-PYILNNQDGTPEIEAGASSFA--PYPRREEDFFFYRKSTPLDNVR----------------TMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTA 503
            RSF   +P   +  +L +TS NILAPI+ R    G RES   + +  R+ +I+D L           ++ H    ++C+QEFW+  P    LYT  L  + GY+  ++ RTN RGDG+   + S ++ ++D + I F DCGDRV  L RV+ K    GG    E         E  C  + L+VNTHLLFPHN  S+ IRLR+V KIL  +++YK +++L P+PIV  GD NGS +GQV +++R +GF S+F+   R      ++QWISH +HR    GVD+I+ L P  Q  PL ADW+  VF  I  +L  A    R AF  F    ++ +   +   +F   +  LG TGE    LT EE+  L +S D D N ++D+ EF             +L ++  G    P        T ++   A+ F   P PRR      Y  ++  + ++                 + V DAF+EP EME G WPDD++LSDH  +T+
Sbjct:  146 RSFGGCSPVDEDEFTLSLTSFNILAPIYYR-KWEGKRESEEREAWWERNKKIVDML-----------EEKH--SSIICLQEFWLGNPELCALYTSHL-HKMGYETFQLARTNNRGDGLLTAIDSSKLRVLDQQDIEFRDCGDRVAQLLRVQCKHLTRGGDHPSEATGDCIVGTEPSCPMEFLLVNTHLLFPHNSNSTLIRLRQVCKILEHLERYKAEQKLPPMPIVLCGDWNGSKRGQVYKFMRSQGFSSSFDT-ARNFEDETLQQWISHRNHRGNLCGVDFIWLLNPSGQMAPLTADWKAAVFGMIKAKLTKAGLRERDAFHFFQAGSEAREQDVVTLEDFILAMDQLGLTGEDSVGLTKEEVGELLASADADGNGVLDYDEFKSILKTRSMAETYELIKRATGIVEDPATDPPPSPTADVPVHAALFGELPSPRRPAIPLQYMYTSAAETLKPCGQSAPGGEQRLPHLDLVVRDAFLEPEEMEHGTWPDDWNLSDHAPVTS 632          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: ABR16038.1 (unknown [Picea sitchensis])

HSP 1 Score: 243.0 bits (619), Expect = 1.900e-60
Identity = 161/483 (33.33%), Postives = 243/483 (50.31%), Query Frame = 0
Query:   59 SLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFV-SPRVELVDSRPILFLDCGDRVGLLCRVR-----VKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSA---VRAAFKVFDSDD--NKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFV-------PYILNN--------QDGTPEIE----------AGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505
            S+  T+ NILAPI+KR++   +RES F D +++R+  I+D L+ E                V+C+QEFWV+     ++Y ++   + GY++ ++ RTN RGDG+   V     ++V+ R +LF D GDRV  L  +R     ++ E GG   E       LVVNTHLLFPHN     IRLR+V KIL +++ +K D  L P+P++  GD NGS +GQV ++LR +GFVS+++ A+N         +WISH +HR    GVD+I+ L P      L   W + VF  +  +L  A      AF  F S      ++   +F + LQ LG T +    LT EEIE L  + D D N +ID +EF        + +  +G  V       PY   N        Q+G+  +E           G+ S  P  + + D          +      V  A + P E+E+G WP+++ +SDH  L+A +
Sbjct:  131 SVSCTTFNILAPIYKRINGEDSRESQFRDYWVSRNESILDMLLLER-------------SSVICLQEFWVRNEELVEMYEQKF-HDAGYEIYKLGRTNNRGDGLFTAVRKDHFKVVNQRELLFHDFGDRVAQLLHLRSVIPSLQSEMGGVPFE------ALVVNTHLLFPHNSNYCLIRLRQVYKILEYLEAFKADYNLPPIPVILCGDWNGSKRGQVYKFLRSQGFVSSYDAAHNYSDNDKDAHKWISHRNHRGNICGVDFIWLLNPNKHRKLLRTSWMEAVFGIVKSKLKEAGLNDLDAFCFFKSAKRFEDYVTLKDFGQGLQQLGLTEQFSEGLTTEEIEDLMVAADLDGNGIIDSREFQKLMVAQSIDRSLEGKNVAEVKLSAPYFPGNSERPLKQCQNGSTTVEPNKHSLLMQTIGSESGTPLMKFDADSNMQDPCCLQETEIGFDVKRASLFPSEVEQGIWPENYLMSDHALLSAVF 593          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_020176110.1 (uncharacterized calcium-binding protein At1g02270 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 242.3 bits (617), Expect = 3.300e-60
Identity = 153/454 (33.70%), Postives = 228/454 (50.22%), Query Frame = 0
Query:   59 SLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELV-DSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIH------KELPSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505
            S+  T+ NILAPI+KR+DS   RES     + +R+ +IID L+G+                ++C+QE W+       +Y +RL  +  Y+L ++ RTN RGDG+   V      V + R +LF D GDRV  L  V               Q   L+VNTHL+FPH+   S +RL++V KIL +I+ Y+ + +LGP+PI+  GD NGS +GQV ++LR +GFVS+++ A+    +     +W+SH +HR    GVD+I+ L P     PL   W + VF  +         LP     A    DS D++ I  + F + L  LG     R  +  EE+E L+S  D D N  +D+KEF    W    Y +E+          +D T EI+    S   +   +E F F              V +A + P E+E+G WP+++ LSDH  LT  +
Sbjct:   34 SVSCTTFNILAPIYKRMDSENGRESQNRANWFSRNEKIIDRLLGDR-------------SSIICLQEVWLGNDELVNMYEKRL-GDANYRLFKLARTNNRGDGLLTAVHRNYFCVLNHRELLFNDFGDRVAQLLHVESAIPFLQNRSSSYVQQQSLIVNTHLVFPHDHSLSIVRLKQVYKILQYIEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDSEEDAHKWVSHRNHRGNICGVDFIWLLNPDKCRKPLKTSWNEAVFGIMKYLLLQVASLPEENAFALLKADSSDDR-ITYSSFCQALCQLGMVHPDR--VNSEEMEDLWSEVDHDGNGAVDYKEFQRCIWSPKCYNQEE----------EDDT-EIDVAEGSIVTFEPNDETFGF-------------TVKEAVLFPPEVEKGMWPENYSLSDHAPLTVVF 446          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_024629078.1 (uncharacterized calcium-binding protein At1g02270 isoform X1 [Medicago truncatula])

HSP 1 Score: 241.9 bits (616), Expect = 4.300e-60
Identity = 148/452 (32.74%), Postives = 235/452 (51.99%), Query Frame = 0
Query:   63 TSANILAPIFKRLD--SNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPR-VELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPH--KIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAVRAAFKVF-----DSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505
            T+ NILAPI+KR+D  + G RES F  ++LAR+ +I+D+L+ E+               ++C+QEFWV      Q++  RL  + GY+L ++ RTN RGDG+   +    + +V+ + +LF DCGDRV  L  VR  +     + +   Q + L+VNTHLLFPH+     +RL +V +IL ++++Y+ +  L P+PI+  GD NGS +G V ++LR +GFVS+++  N+    +    KQW+SH +HR    GVD+I+   P     PL   W + VFS +  +L  A  +    F     D+  +  +    F + L+ +   G     L  ++++ L++  D D N +IDF+EF  + W     +    N   Y+   +D   E E     F                         KV +A + PRE+E+G WP+D+ LSDH  LTA +
Sbjct:   50 TTFNILAPIYKRIDPQNQGLRESDFRSRWLARNQRILDSLLSES-------------SSIMCLQEFWVGNEELVQMFEERL-GDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLHVRSVNPILQNQKDSVHQ-EFLIVNTHLLFPHDSSLCIVRLDQVYQILKYVEQYQKENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYTDSYADAHKQWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWSEAVFSILKFQLRKASLSEDDAFTFLKGDNYADSSVTYFSFSEALRQVKLFGVPY-GLRFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCSEHVYENVNVYV---KDSNTEQEQETIGF-------------------------KVKNAMLFPREVEKGLWPEDYSLSDHARLTAVF 457          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: BAJ95678.1 (predicted protein [Hordeum vulgare subsp. vulgare] >BAJ88965.1 predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 241.5 bits (615), Expect = 5.700e-60
Identity = 155/465 (33.33%), Postives = 228/465 (49.03%), Query Frame = 0
Query:   52 PSPL----EAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELV-DSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIH------KELPSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505
            P PL    +  S+  T+ NILAPI+KR+DS   RES     + +R+ +IID L+G+                ++C+QE W+       +Y +RL  +  YKL ++ RTN RGDG+   V      V + R +LF D GDRV  L  V               Q   L+VNTHL+FPH+   S +RL++V KIL +++ Y+ + +LGP+PI+  GD NGS +GQV ++LR +GFVS+++ A+    +     +W+SH +HR    GVD+I+ L P     PL   W + VF  I         LP     A    DS D+  I  + F + L  LG     R  +  +E+E L+S  D D N  +D+KEF    W             P   N ++   EIE    S   +   +E F F              V +A + P E+E+G WP+++ LSDH  LT  +
Sbjct:   17 PPPLLQARDERSVSCTTFNILAPIYKRMDSENGRESQNRANWFSRNEKIIDRLLGDR-------------SSIICLQEVWLGNDELVNMYEKRL-GDANYKLFKLARTNNRGDGLLTAVHMNYFCVLNHRELLFNDFGDRVAQLLHVESVIPFLQNRSSSYVQQQSLIVNTHLVFPHDHSLSIVRLKQVYKILQYVEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDSEEDAHKWVSHRNHRGNICGVDFIWLLNPDKCRKPLKTSWNEAVFGIIKYLLLQVASLPEENAFALLKADSSDD-CITYSSFCQALCQLGMVHPDR--VNSKEMEDLWSEVDHDGNGAVDYKEFQRCIWS------------PKCYNQEEDDTEIEVAEESIVTFEPSDETFGF-------------TVKEAVLFPPEVEKGMWPENYSLSDHAPLTVVF 439          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: OAE30108.1 (hypothetical protein AXG93_1112s1250 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 240.7 bits (613), Expect = 9.700e-60
Identity = 156/482 (32.37%), Postives = 240/482 (49.79%), Query Frame = 0
Query:   56 EAMSLRVTSANILAPIFKRLDSNGTR-ESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGV-ACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKEL-------PSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREE--------DFFFYRKSTPLDNVRTMKVIDAFIE---------------PREMEEGHWPDDFHLSDHGFLTAQY 505
            E+  L  T+ NILAPI+KRL+  G+  ES   + +L R+ +I++ LV E                ++C+QEFW+      +LY   L    GY + ++ RTN RGDG+   + +  +E++D   ILF DCGDRV     ++       +E        +LVVNTHLLFPHN     IRLR+V KIL +++KY    +L P+PI+  GD NGS +GQV ++LR +GFVS+++ A+    +     +W+SH +HR    GVD+I+ L P     PL+  W++ VF  +  +L              F+  D+ ++  +   +F+  L  LG   E    LT  EIE L  ST   A +   F  + +    L+L+Q E  +    + +  D +  +       +P P +          D  + RK  P++ + TMK+ D  +E               P E+E+G WPD + LSDH FLTA +
Sbjct:  141 ESSFLSCTTLNILAPIYKRLNQEGSSLESHCRESWLIRNERILELLVREK-------------SSIICLQEFWLGNEELVRLYEDGL-SAAGYGMFKLARTNNRGDGLFTAYRTDGLEVMDYSEILFYDCGDRVAQFLHMKSDHRSSLQE--------LLVVNTHLLFPHNSNFCLIRLRQVYKILDYLEKYIEKLQLSPMPIILCGDWNGSKRGQVYKFLRARGFVSSYDMAHQYTDSDADSHRWVSHRNHRGNICGVDFIWLLNPSKHQRPLSECWKEAVFMIMKAKLLEMGIKDEKDTIEFFECEDATEDDLVPFEKFQHALNRLGLMDEDSEGLTTPEIEDLLQST---APENTGFMTYGELKTLLNLHQAEPMSSC-LLKDKLDDSTYLCKDTIPASPIPAKANSNNGLSSGDCLYSRKVVPVEGMTTMKIADDIVEKHPCSDFDVKDAHLFPPEVEQGFWPDSYSLSDHAFLTAVF 596          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: PTQ31981.1 (hypothetical protein MARPO_0104s0017 [Marchantia polymorpha])

HSP 1 Score: 240.7 bits (613), Expect = 9.700e-60
Identity = 156/482 (32.37%), Postives = 240/482 (49.79%), Query Frame = 0
Query:   56 EAMSLRVTSANILAPIFKRLDSNGTR-ESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGV-ACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKEL-------PSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREE--------DFFFYRKSTPLDNVRTMKVIDAFIE---------------PREMEEGHWPDDFHLSDHGFLTAQY 505
            E+  L  T+ NILAPI+KRL+  G+  ES   + +L R+ +I++ LV E                ++C+QEFW+      +LY   L    GY + ++ RTN RGDG+   + +  +E++D   ILF DCGDRV     ++       +E        +LVVNTHLLFPHN     IRLR+V KIL +++KY    +L P+PI+  GD NGS +GQV ++LR +GFVS+++ A+    +     +W+SH +HR    GVD+I+ L P     PL+  W++ VF  +  +L              F+  D+ ++  +   +F+  L  LG   E    LT  EIE L  ST   A +   F  + +    L+L+Q E  +    + +  D +  +       +P P +          D  + RK  P++ + TMK+ D  +E               P E+E+G WPD + LSDH FLTA +
Sbjct:   42 ESSFLSCTTLNILAPIYKRLNQEGSSLESHCRESWLIRNERILELLVREK-------------SSIICLQEFWLGNEELVRLYEDGL-SAAGYGMFKLARTNNRGDGLFTAYRTDGLEVMDYSEILFYDCGDRVAQFLHMKSDHRSSLQE--------LLVVNTHLLFPHNSNFCLIRLRQVYKILDYLEKYIEKLQLSPMPIILCGDWNGSKRGQVYKFLRARGFVSSYDMAHQYTDSDADSHRWVSHRNHRGNICGVDFIWLLNPSKHQRPLSECWKEAVFMIMKAKLLEMGIKDEKDTIEFFECEDATEDDLVPFEKFQHALNRLGLMDEDSEGLTTPEIEDLLQST---APENTGFMTYGELKTLLNLHQAEPMSSC-LLKDKLDDSTYLCKDTIPASPIPAKANSNNGLSSGDCLYSRKVVPVEGMTTMKIADDIVEKHPCSDFDVKDAHLFPPEVEQGFWPDSYSLSDHAFLTAVF 497          
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_004983284.1 (uncharacterized calcium-binding protein At1g02270 isoform X1 [Setaria italica] >KQK89362.1 hypothetical protein SETIT_035629mg [Setaria italica])

HSP 1 Score: 240.0 bits (611), Expect = 1.600e-59
Identity = 151/458 (32.97%), Postives = 226/458 (49.34%), Query Frame = 0
Query:   54 PLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFV-SPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAV----RAAFKVFDSDD-NKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505
            P +   +  T+ NILAPI+KR+DS   RES +   + +R+ +IID L+ ++               ++C+QE W+       +Y +RL  +  Y L ++ RTN RGDG+   V S    +++ R +LF D GDRV  L  V               Q   L+VNTHLLFPH+   S +RLR+V KIL +I+ Y+ + +LGP+PI+  GD NGS +GQV ++LR +GFVS+++ A+          +W+SH +HR    GVD+I+ L P     PL   W + VF  I   L          AF +  +D  +  I  + F + L  LG     R  L  EEIE L+   D+D + +ID+KEF    W  +   +E+ +    I + +  T E   GA  F                          V +A + P E+E G WP+++ LSDH  LT  +
Sbjct:   24 PRDERCVSCTTFNILAPIYKRMDSENCRESQYRAYWFSRNEKIIDRLLADS-------------SSIICLQEVWLGNDELVDMYQKRL-GDANYTLFKLARTNNRGDGLLTAVHSSYFNVLNYRELLFNDFGDRVAQLLHVESAMPVLQNRSTRCVQQQSLIVNTHLLFPHDHSLSVVRLRQVYKILQYIEAYQEENKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDGEEDAHKWVSHRNHRGNICGVDFIWLLNPDKCRKPLKTSWNEAVFGIIKYLLLQVAFLSEENAFALLKADSPDDHITYSSFYQALSQLGMVHADR--LNSEEIEDLWGEADRDGDGVIDYKEFQQCIWSPNCCSQEEDDTEIDITDERIDTFEANDGAFGFT-------------------------VKEAVLFPPEVERGMWPENYSLSDHAPLTVVF 440          
The following BLAST results are available for this feature:
BLAST of NO20G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22015.14.700e-11576.89calcium-binding protein, partial [Nannochloropsis ... [more]
XP_005852620.11.100e-10676.21hypothetical protein NGA_0713500, partial [Nannoch... [more]
GAQ86146.18.200e-6735.39calcium-binding endonuclease [Klebsormidium nitens... [more]
ABR16038.11.900e-6033.33unknown [Picea sitchensis][more]
XP_020176110.13.300e-6033.70uncharacterized calcium-binding protein At1g02270 ... [more]
XP_024629078.14.300e-6032.74uncharacterized calcium-binding protein At1g02270 ... [more]
BAJ95678.15.700e-6033.33predicted protein [Hordeum vulgare subsp. vulgare]... [more]
OAE30108.19.700e-6032.37hypothetical protein AXG93_1112s1250 [Marchantia p... [more]
PTQ31981.19.700e-6032.37hypothetical protein MARPO_0104s0017 [Marchantia p... [more]
XP_004983284.11.600e-5932.97uncharacterized calcium-binding protein At1g02270 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002759NSK002759Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02160.3NO20G02160.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02160.2NO20G02160.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02160.1NO20G02160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|94467gene_6439Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100959g1gene8414Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02160.3NO20G02160.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02160.2NO20G02160.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02160.1NO20G02160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02160 ID=NO20G02160|Name=NO20G02160|organism=Nannochloropsis oceanica|type=gene|length=3858bp
AGGGGGGCTGCTCCTTGCTTGATTTTCTTTCGTTCCCGCATTTCCTCTCC
ATTCTTGTTCCCTTCCCTCCCTCCGTGCTTTTTTCCAAAGCATTTAGACA
AGCTCAGATTATTTGGGGAACATCGACTGGTCATTCTCCGGGTGACACTG
ATGGCAAGCGATGCGAGGATTCCATCGTTGAGAGTGTCGCCCCAAGGCCA
CCTTTTCTGATAGTTGGCTGGGCGGGTTTGTGAGATTCCACGAAGGGGAG
GGGGGGTATCGAGGCTTGTCTTGTTTTTTGGCGGGTGTGCGCGACACTAT
TTTAAAAGCCGCTTAATTGCCTCCTTTCCCTTGTCTCATCCTTCTTCACG
TATTGCTCACGAAGCCCTTGGATATGGGGCGGCCGTGGTAGTGTTGGGTG
CGTTCATCAGGACGCGGACCGCGCTTCCGCTTCGCGCAACGACATTGCCT
CGTCGTATGCACAGGCCAGGGTGTCCATCCTTCCGCTCGAGCTGTCACTA
CAGTAGCTAATTTAGGACGTAGGAGAATACATGATACGGCCTGTAGCTGC
ATGGGTGCCTCTGTGGGGACGAGAGTTGAATTGATTTTGCTGCTCGAGGG
GTAGGTAGCGACTCCCAAGGGAGTCAGGAAGAGATGCGGCCGGATAGTCG
GTGGAGTACAGGCAGTGGAGTAAAAGCCGCAGTATCATTGCACGTACTTC
TGCCTCCCTTGTCAAGGTGTCCATGGGCTCTTTCCTGTGCATTAATGTGT
TGGAATATGTGCCATGAGGAGGTGCCACTGCTTGTTGAAGGCGCTGTGAC
GTAAATAGGGAGACCCAGTCACCTTACTGTGAAATTCTCTCTCACCATCA
CCAACCAACCTCACCACAGGCCCCGGCAGAACACCTCGGTTGCAACGTCG
TTTTTGCACGTGGTCGTGTGCATCCAGTACGGGACGCACGGTCGTGGTAA
ACTCGACGCTTGCGCAAGAAAGCCTCATCGCCTAGTCAGATACTGGGGCC
CCCAACCCCGTGCGCACACACGGACAGCCTTCCCGCGCAAGGGGGACGGC
CTACTCATGACATTCAGCACCAGGAGAAGAATACCTCACTTCTCCTCCTT
TCCTTTGCCCCTTCTCCTCCTCTCTCTCTTGGCTCCACACGTCTCCCTCC
CCTTGACTTCCGCCTTCCTGCGGCCCTCCCTCGTTCCTCCCACGCACCGT
TCATTCAATCCCTCCCCTCTTGAAGCTATGTCTCTCCGGGTGACCAGTGC
GAATATCCTGGCACCTATCTTCAAGCGGCTCGACAGCAACGGCACCCGCG
AAAGCTCTTTCGAAGACAAGTATCTCGCACGACATACCCAAATTATTGAT
AACCTCGTGGGGGAGACTGTAGGGAAAGGGAAAGGAGGGAAGGATGCACA
TGTGTTGCCTGATGTGTTGTGTGTACAGGAGTTCTGGGTGCAGGGTCCTT
TATTTCGCCAGCTGTATACACGGAGACTGTGTGAGGAACGAGGGTATAAG
CTGGTCGAAGTGGAGCGGACCAATCAGCGAGGGGATGGTGTGGCGTGCTT
CGTCTCTCCGAGGGTCGAGCTGGTGGATTCAAGGCCCATCCTTTTCCTGG
ATTGTGGGGATCGCGTGGGCTTGTTGTGTCGGGTCAGGGTGAAGGACGAG
GAAGGCGGGAGGGAGGGCGAGGAGGAGGAGCAGTGCGACGTGCTGGTGGT
AAATACGCATCTCCTTTTCCCCCACAATCCGTATTCGAGTCGAATTCGTT
TGAGAGAAGTGCAGAAAATTCTGGGCTTTATTGACAAATACAAGCATGgt
aaggagtgagggaaggagggagggagggaaggagggagggaagagggagg
gagggagatgtggctttttcgaagcaagagtgtatgttgctctctctgct
ttccctccctgcctgttttgcgtgcgtggagagacggcaacttacccact
tcagaagcccagaaaatcatgctgccaagcaactaaccaccccttccttc
ctccctccctccctccctcaagACGAAGAGCTGGGCCCCCTTCCTATTGT
CTTTGTCGGGGATTTGAATGGCTCGCCAAAAGGGCAAGTAGCCGAATATC
TCCGTCATAAAGGCTTCGTTTCGGCCTTTGAAGCCTACAACCGACCTCGG
GCTCCGCACAAGgtacctctctccctccctctctccctttcttcctctct
tcctccctcccttcctccctccactcctcatagtttgcccgctgcccctc
agtacgaagttatcaggcgtcatcccgtatgcaagcaagatcctgagcgc
atttcaaatcaaaccgaactcctccctccctccctccctccccccccagA
TTAAACAGTGGATCTCTCATTTTTCCCACCGGAAGGAATTCGTAGGCGTC
GACTACATTTTCCACTTACAGCCTCAGAACCAATCGCTGCCTCTGGCCGC
CGACTGGCGCAAGCTCGTCTTCAGTGAAATTCACAAAGAGCTACCCTCTG
CCGTGAGGGCGGCGTTCAAGgtaggtaggtagtgagggagggagcgaggg
agggcgtagaggttatgttttggcttaatcggtgcgtgttttccccttga
tgacctcagttcacttaccttctctctcatcccttcctccctcccttccc
ctttccccttcgtcagGTCTTCGACTCCGACGACAACAAGTTCATCGACC
CGGCCGAATTCAAAAAGACGTTACAAAACCTGGGCTTCACCGGAGAGGGG
CGACCAGCGCTCACAGgtacataggccgtccttccctccctccctccttc
cctccctccttccctccctccctccctccctccctccctccctccctccc
ttctcctttcctttttcgtcgtcgcctttctcctcaagcaagcaattgag
cgtcccctccttccctccctccctccctcccacagACGAAGAGATCGAGT
TTCTCTTCTCATCGACCGACAAGGACGCCAACCAGATGATTGACTTCAAG
GAGGTGAGGAGGGAGGGAGGGAGGGAGGAAGGCTTTTGAATGGGAAGGGA
TAGGAAGGCCGGCCTTTGCGGGGGCAATGGCTATTCTTGGATTGCTCGTA
AATCTCGACCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCCTCCCTC
CCTCCTCAGTTTGTGGACCGCTTCTGGGAGCTCGACTTGTACCAGAAGGA
AGACGGGAATTTCGTGCCCTACATCCTCAACAACCAAGACGGCACTCCTG
AGATAGAGGCAGGCGCCTCGTCTTTCGCTCCCTACCCACGGCGGGAGGAA
GATTTTTTTTTCTACCGGAAAAGCACGCCCTTGGACAACGTTCGCACGAT
GAAGGTACGTATGCCCGCCTTCCCTCCTTCCTTTCCTCCCTCCCGCCCTC
CGTATCTGCGAGGACGGTGGCGAGATTTACCCCTTTCTTGAACGAGCACG
CCGTTGGAAGATGATCCACGGGCGACGATGGCTCACTACCCCTCCTTCCC
TCCCGCCCTCCCCTTCCTCCCTCCAACCCTAGGTGATCGACGCGTTCATC
GAGCCCCGGGAGATGGAAGAAGGCCACTGGCCAGACGATTTCCACCTCTC
CGATCACGGTTTCCTCACAGCCCAATACCTTCTTAAAGGATAGGGAGGAA
GGAAGGGAGGGAGGGAGAGGATAGAAGAGGTTGTACACTGGAGAAGGGGG
GAAACATAGAGCATGCCGCAATGGTACGACGCAAGCGCAGTAGACCAAAT
GATCTCTCGTGGACGGGTTGACAAGACAATAACAAAGAAGGAAAAAAAAC
AAAGTAGTAATCAAAGGCAAAGGAAGGGAAGCGAGGGAACAAATCCGAGT
CGATCCCT
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protein sequence of NO20G02160.3

>NO20G02160.3-protein ID=NO20G02160.3-protein|Name=NO20G02160.3|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MTFSTRRRIPHFSSFPLPLLLLSLLAPHVSLPLTSAFLRPSLVPPTHRSF
NPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNL
VGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLV
EVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEG
GREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEE
LGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHKIKQWIS
HFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAVRAAF
KVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDAN
QMIDFKEVRREGGREEGF*
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protein sequence of NO20G02160.2

>NO20G02160.2-protein ID=NO20G02160.2-protein|Name=NO20G02160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MTFSTRRRIPHFSSFPLPLLLLSLLAPHVSLPLTSAFLRPSLVPPTHRSF
NPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNL
VGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLV
EVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEG
GREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEE
LGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHKIKQWIS
HFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAVRAAF
KVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDAN
QMIDFKEVRREGGREEGF*
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protein sequence of NO20G02160.1

>NO20G02160.1-protein ID=NO20G02160.1-protein|Name=NO20G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bp
MTFSTRRRIPHFSSFPLPLLLLSLLAPHVSLPLTSAFLRPSLVPPTHRSF
NPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNL
VGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLV
EVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEG
GREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEE
LGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHKIKQWIS
HFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAVRAAF
KVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDAN
QMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYP
RREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFL
TAQYLLKG*
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Synonyms
Publications