NO20G02160, NO20G02160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02160 vs. NCBI_GenBank
Match: EWM22015.1 (calcium-binding protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 424.5 bits (1090), Expect = 4.700e-115 Identity = 203/264 (76.89%), Postives = 229/264 (86.74%), Query Frame = 0 Query: 31 LPLTSAFLRPSLVPPTHRSFNPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHK 295 L +SAFLR + P R+F PSPLEAM+ R+TSAN+LAPIFKR+DSNGTRES+F+++YL RH+++ID L+G + G+D +LPDVLCVQEFW QG +R+LY RLCEE+GYKLVEVERTN RGDGVACFVSPRVELVD RPI FLDCGDRVGLLCRVRV+DEE G EG E+EQCD+LVVNTHLLFPHN YSSRIRLREVQKILGFIDKYKHDE+LGPLPI+F GDLNGSPKGQV EYLRHKGFVSAFEAYNRPRAPHK Sbjct: 121 LTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLG-----SRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAG-EGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNRPRAPHK 378
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_005852620.1 (hypothetical protein NGA_0713500, partial [Nannochloropsis gaditana CCMP526] >EKU23210.1 hypothetical protein NGA_0713500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 396.7 bits (1018), Expect = 1.100e-106 Identity = 189/248 (76.21%), Postives = 215/248 (86.69%), Query Frame = 0 Query: 34 TSAFLRPSLVPPTHRSFNPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVS 282 +SAFLR + P R+F PSPLEAM+ R+TSAN+LAPIFKR+DSNGTRES+FE++YL RH+++ID L+G + G+D +LPDVLCVQEFW QG +R+LY RLCEE+GYKLVEVERTN RGDGVACFVSPRVELVD RPI FLDCGDRVGLLCRVR++DEE G EG E+EQCD+LVVNTHLLFPHN YSSRIRLREVQKILGFIDKYKHDE+LGPLPI+F GDLNGSPKGQV EYLRHKGFVS Sbjct: 67 SSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFEEQYLRRHSRVIDRLLG-----SRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRLRDEEAG-EGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVS 308
BLAST of NO20G02160 vs. NCBI_GenBank
Match: GAQ86146.1 (calcium-binding endonuclease [Klebsormidium nitens]) HSP 1 Score: 264.2 bits (674), Expect = 8.200e-67 Identity = 178/503 (35.39%), Postives = 259/503 (51.49%), Query Frame = 0 Query: 48 RSF---NPSPLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFV-SPRVELVDSRPILFLDCGDRVGLLCRVRVKD-EEGGREGEE---------EEQC--DVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSA---VRAAFKVF----DSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFV------DRFWELDLYQKEDGNFV-PYILNNQDGTPEIEAGASSFA--PYPRREEDFFFYRKSTPLDNVR----------------TMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTA 503 RSF +P + +L +TS NILAPI+ R G RES + + R+ +I+D L ++ H ++C+QEFW+ P LYT L + GY+ ++ RTN RGDG+ + S ++ ++D + I F DCGDRV L RV+ K GG E E C + L+VNTHLLFPHN S+ IRLR+V KIL +++YK +++L P+PIV GD NGS +GQV +++R +GF S+F+ R ++QWISH +HR GVD+I+ L P Q PL ADW+ VF I +L A R AF F ++ + + +F + LG TGE LT EE+ L +S D D N ++D+ EF +L ++ G P T ++ A+ F P PRR Y ++ + ++ + V DAF+EP EME G WPDD++LSDH +T+ Sbjct: 146 RSFGGCSPVDEDEFTLSLTSFNILAPIYYR-KWEGKRESEEREAWWERNKKIVDML-----------EEKH--SSIICLQEFWLGNPELCALYTSHL-HKMGYETFQLARTNNRGDGLLTAIDSSKLRVLDQQDIEFRDCGDRVAQLLRVQCKHLTRGGDHPSEATGDCIVGTEPSCPMEFLLVNTHLLFPHNSNSTLIRLRQVCKILEHLERYKAEQKLPPMPIVLCGDWNGSKRGQVYKFMRSQGFSSSFDT-ARNFEDETLQQWISHRNHRGNLCGVDFIWLLNPSGQMAPLTADWKAAVFGMIKAKLTKAGLRERDAFHFFQAGSEAREQDVVTLEDFILAMDQLGLTGEDSVGLTKEEVGELLASADADGNGVLDYDEFKSILKTRSMAETYELIKRATGIVEDPATDPPPSPTADVPVHAALFGELPSPRRPAIPLQYMYTSAAETLKPCGQSAPGGEQRLPHLDLVVRDAFLEPEEMEHGTWPDDWNLSDHAPVTS 632
BLAST of NO20G02160 vs. NCBI_GenBank
Match: ABR16038.1 (unknown [Picea sitchensis]) HSP 1 Score: 243.0 bits (619), Expect = 1.900e-60 Identity = 161/483 (33.33%), Postives = 243/483 (50.31%), Query Frame = 0 Query: 59 SLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFV-SPRVELVDSRPILFLDCGDRVGLLCRVR-----VKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSA---VRAAFKVFDSDD--NKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFV-------PYILNN--------QDGTPEIE----------AGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505 S+ T+ NILAPI+KR++ +RES F D +++R+ I+D L+ E V+C+QEFWV+ ++Y ++ + GY++ ++ RTN RGDG+ V ++V+ R +LF D GDRV L +R ++ E GG E LVVNTHLLFPHN IRLR+V KIL +++ +K D L P+P++ GD NGS +GQV ++LR +GFVS+++ A+N +WISH +HR GVD+I+ L P L W + VF + +L A AF F S ++ +F + LQ LG T + LT EEIE L + D D N +ID +EF + + +G V PY N Q+G+ +E G+ S P + + D + V A + P E+E+G WP+++ +SDH L+A + Sbjct: 131 SVSCTTFNILAPIYKRINGEDSRESQFRDYWVSRNESILDMLLLER-------------SSVICLQEFWVRNEELVEMYEQKF-HDAGYEIYKLGRTNNRGDGLFTAVRKDHFKVVNQRELLFHDFGDRVAQLLHLRSVIPSLQSEMGGVPFE------ALVVNTHLLFPHNSNYCLIRLRQVYKILEYLEAFKADYNLPPIPVILCGDWNGSKRGQVYKFLRSQGFVSSYDAAHNYSDNDKDAHKWISHRNHRGNICGVDFIWLLNPNKHRKLLRTSWMEAVFGIVKSKLKEAGLNDLDAFCFFKSAKRFEDYVTLKDFGQGLQQLGLTEQFSEGLTTEEIEDLMVAADLDGNGIIDSREFQKLMVAQSIDRSLEGKNVAEVKLSAPYFPGNSERPLKQCQNGSTTVEPNKHSLLMQTIGSESGTPLMKFDADSNMQDPCCLQETEIGFDVKRASLFPSEVEQGIWPENYLMSDHALLSAVF 593
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_020176110.1 (uncharacterized calcium-binding protein At1g02270 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 242.3 bits (617), Expect = 3.300e-60 Identity = 153/454 (33.70%), Postives = 228/454 (50.22%), Query Frame = 0 Query: 59 SLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELV-DSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIH------KELPSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505 S+ T+ NILAPI+KR+DS RES + +R+ +IID L+G+ ++C+QE W+ +Y +RL + Y+L ++ RTN RGDG+ V V + R +LF D GDRV L V Q L+VNTHL+FPH+ S +RL++V KIL +I+ Y+ + +LGP+PI+ GD NGS +GQV ++LR +GFVS+++ A+ + +W+SH +HR GVD+I+ L P PL W + VF + LP A DS D++ I + F + L LG R + EE+E L+S D D N +D+KEF W Y +E+ +D T EI+ S + +E F F V +A + P E+E+G WP+++ LSDH LT + Sbjct: 34 SVSCTTFNILAPIYKRMDSENGRESQNRANWFSRNEKIIDRLLGDR-------------SSIICLQEVWLGNDELVNMYEKRL-GDANYRLFKLARTNNRGDGLLTAVHRNYFCVLNHRELLFNDFGDRVAQLLHVESAIPFLQNRSSSYVQQQSLIVNTHLVFPHDHSLSIVRLKQVYKILQYIEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDSEEDAHKWVSHRNHRGNICGVDFIWLLNPDKCRKPLKTSWNEAVFGIMKYLLLQVASLPEENAFALLKADSSDDR-ITYSSFCQALCQLGMVHPDR--VNSEEMEDLWSEVDHDGNGAVDYKEFQRCIWSPKCYNQEE----------EDDT-EIDVAEGSIVTFEPNDETFGF-------------TVKEAVLFPPEVEKGMWPENYSLSDHAPLTVVF 446
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_024629078.1 (uncharacterized calcium-binding protein At1g02270 isoform X1 [Medicago truncatula]) HSP 1 Score: 241.9 bits (616), Expect = 4.300e-60 Identity = 148/452 (32.74%), Postives = 235/452 (51.99%), Query Frame = 0 Query: 63 TSANILAPIFKRLD--SNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPR-VELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFEAYNRPRAPH--KIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAVRAAFKVF-----DSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505 T+ NILAPI+KR+D + G RES F ++LAR+ +I+D+L+ E+ ++C+QEFWV Q++ RL + GY+L ++ RTN RGDG+ + + +V+ + +LF DCGDRV L VR + + + Q + L+VNTHLLFPH+ +RL +V +IL ++++Y+ + L P+PI+ GD NGS +G V ++LR +GFVS+++ N+ + KQW+SH +HR GVD+I+ P PL W + VFS + +L A + F D+ + + F + L+ + G L ++++ L++ D D N +IDF+EF + W + N Y+ +D E E F KV +A + PRE+E+G WP+D+ LSDH LTA + Sbjct: 50 TTFNILAPIYKRIDPQNQGLRESDFRSRWLARNQRILDSLLSES-------------SSIMCLQEFWVGNEELVQMFEERL-GDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLHVRSVNPILQNQKDSVHQ-EFLIVNTHLLFPHDSSLCIVRLDQVYQILKYVEQYQKENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYTDSYADAHKQWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWSEAVFSILKFQLRKASLSEDDAFTFLKGDNYADSSVTYFSFSEALRQVKLFGVPY-GLRFQQLQDLWNQADVDGNGVIDFEEFKQKIWNSTCSEHVYENVNVYV---KDSNTEQEQETIGF-------------------------KVKNAMLFPREVEKGLWPEDYSLSDHARLTAVF 457
BLAST of NO20G02160 vs. NCBI_GenBank
Match: BAJ95678.1 (predicted protein [Hordeum vulgare subsp. vulgare] >BAJ88965.1 predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 241.5 bits (615), Expect = 5.700e-60 Identity = 155/465 (33.33%), Postives = 228/465 (49.03%), Query Frame = 0 Query: 52 PSPL----EAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFVSPRVELV-DSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIH------KELPSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505 P PL + S+ T+ NILAPI+KR+DS RES + +R+ +IID L+G+ ++C+QE W+ +Y +RL + YKL ++ RTN RGDG+ V V + R +LF D GDRV L V Q L+VNTHL+FPH+ S +RL++V KIL +++ Y+ + +LGP+PI+ GD NGS +GQV ++LR +GFVS+++ A+ + +W+SH +HR GVD+I+ L P PL W + VF I LP A DS D+ I + F + L LG R + +E+E L+S D D N +D+KEF W P N ++ EIE S + +E F F V +A + P E+E+G WP+++ LSDH LT + Sbjct: 17 PPPLLQARDERSVSCTTFNILAPIYKRMDSENGRESQNRANWFSRNEKIIDRLLGDR-------------SSIICLQEVWLGNDELVNMYEKRL-GDANYKLFKLARTNNRGDGLLTAVHMNYFCVLNHRELLFNDFGDRVAQLLHVESVIPFLQNRSSSYVQQQSLIVNTHLVFPHDHSLSIVRLKQVYKILQYVEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDSEEDAHKWVSHRNHRGNICGVDFIWLLNPDKCRKPLKTSWNEAVFGIIKYLLLQVASLPEENAFALLKADSSDD-CITYSSFCQALCQLGMVHPDR--VNSKEMEDLWSEVDHDGNGAVDYKEFQRCIWS------------PKCYNQEEDDTEIEVAEESIVTFEPSDETFGF-------------TVKEAVLFPPEVEKGMWPENYSLSDHAPLTVVF 439
BLAST of NO20G02160 vs. NCBI_GenBank
Match: OAE30108.1 (hypothetical protein AXG93_1112s1250 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 240.7 bits (613), Expect = 9.700e-60 Identity = 156/482 (32.37%), Postives = 240/482 (49.79%), Query Frame = 0 Query: 56 EAMSLRVTSANILAPIFKRLDSNGTR-ESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGV-ACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKEL-------PSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREE--------DFFFYRKSTPLDNVRTMKVIDAFIE---------------PREMEEGHWPDDFHLSDHGFLTAQY 505 E+ L T+ NILAPI+KRL+ G+ ES + +L R+ +I++ LV E ++C+QEFW+ +LY L GY + ++ RTN RGDG+ + + +E++D ILF DCGDRV ++ +E +LVVNTHLLFPHN IRLR+V KIL +++KY +L P+PI+ GD NGS +GQV ++LR +GFVS+++ A+ + +W+SH +HR GVD+I+ L P PL+ W++ VF + +L F+ D+ ++ + +F+ L LG E LT EIE L ST A + F + + L+L+Q E + + + D + + +P P + D + RK P++ + TMK+ D +E P E+E+G WPD + LSDH FLTA + Sbjct: 141 ESSFLSCTTLNILAPIYKRLNQEGSSLESHCRESWLIRNERILELLVREK-------------SSIICLQEFWLGNEELVRLYEDGL-SAAGYGMFKLARTNNRGDGLFTAYRTDGLEVMDYSEILFYDCGDRVAQFLHMKSDHRSSLQE--------LLVVNTHLLFPHNSNFCLIRLRQVYKILDYLEKYIEKLQLSPMPIILCGDWNGSKRGQVYKFLRARGFVSSYDMAHQYTDSDADSHRWVSHRNHRGNICGVDFIWLLNPSKHQRPLSECWKEAVFMIMKAKLLEMGIKDEKDTIEFFECEDATEDDLVPFEKFQHALNRLGLMDEDSEGLTTPEIEDLLQST---APENTGFMTYGELKTLLNLHQAEPMSSC-LLKDKLDDSTYLCKDTIPASPIPAKANSNNGLSSGDCLYSRKVVPVEGMTTMKIADDIVEKHPCSDFDVKDAHLFPPEVEQGFWPDSYSLSDHAFLTAVF 596
BLAST of NO20G02160 vs. NCBI_GenBank
Match: PTQ31981.1 (hypothetical protein MARPO_0104s0017 [Marchantia polymorpha]) HSP 1 Score: 240.7 bits (613), Expect = 9.700e-60 Identity = 156/482 (32.37%), Postives = 240/482 (49.79%), Query Frame = 0 Query: 56 EAMSLRVTSANILAPIFKRLDSNGTR-ESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGV-ACFVSPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKEL-------PSAVRAAFKVFDSDDNKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREE--------DFFFYRKSTPLDNVRTMKVIDAFIE---------------PREMEEGHWPDDFHLSDHGFLTAQY 505 E+ L T+ NILAPI+KRL+ G+ ES + +L R+ +I++ LV E ++C+QEFW+ +LY L GY + ++ RTN RGDG+ + + +E++D ILF DCGDRV ++ +E +LVVNTHLLFPHN IRLR+V KIL +++KY +L P+PI+ GD NGS +GQV ++LR +GFVS+++ A+ + +W+SH +HR GVD+I+ L P PL+ W++ VF + +L F+ D+ ++ + +F+ L LG E LT EIE L ST A + F + + L+L+Q E + + + D + + +P P + D + RK P++ + TMK+ D +E P E+E+G WPD + LSDH FLTA + Sbjct: 42 ESSFLSCTTLNILAPIYKRLNQEGSSLESHCRESWLIRNERILELLVREK-------------SSIICLQEFWLGNEELVRLYEDGL-SAAGYGMFKLARTNNRGDGLFTAYRTDGLEVMDYSEILFYDCGDRVAQFLHMKSDHRSSLQE--------LLVVNTHLLFPHNSNFCLIRLRQVYKILDYLEKYIEKLQLSPMPIILCGDWNGSKRGQVYKFLRARGFVSSYDMAHQYTDSDADSHRWVSHRNHRGNICGVDFIWLLNPSKHQRPLSECWKEAVFMIMKAKLLEMGIKDEKDTIEFFECEDATEDDLVPFEKFQHALNRLGLMDEDSEGLTTPEIEDLLQST---APENTGFMTYGELKTLLNLHQAEPMSSC-LLKDKLDDSTYLCKDTIPASPIPAKANSNNGLSSGDCLYSRKVVPVEGMTTMKIADDIVEKHPCSDFDVKDAHLFPPEVEQGFWPDSYSLSDHAFLTAVF 497
BLAST of NO20G02160 vs. NCBI_GenBank
Match: XP_004983284.1 (uncharacterized calcium-binding protein At1g02270 isoform X1 [Setaria italica] >KQK89362.1 hypothetical protein SETIT_035629mg [Setaria italica]) HSP 1 Score: 240.0 bits (611), Expect = 1.600e-59 Identity = 151/458 (32.97%), Postives = 226/458 (49.34%), Query Frame = 0 Query: 54 PLEAMSLRVTSANILAPIFKRLDSNGTRESSFEDKYLARHTQIIDNLVGETVGKGKGGKDAHVLPDVLCVQEFWVQGPLFRQLYTRRLCEERGYKLVEVERTNQRGDGVACFV-SPRVELVDSRPILFLDCGDRVGLLCRVRVKDEEGGREGEEEEQCDVLVVNTHLLFPHNPYSSRIRLREVQKILGFIDKYKHDEELGPLPIVFVGDLNGSPKGQVAEYLRHKGFVSAFE-AYNRPRAPHKIKQWISHFSHRKEFVGVDYIFHLQPQNQSLPLAADWRKLVFSEIHKELPSAV----RAAFKVFDSDD-NKFIDPAEFKKTLQNLGFTGEGRPALTDEEIEFLFSSTDKDANQMIDFKEFVDRFWELDLYQKEDGNFVPYILNNQDGTPEIEAGASSFAPYPRREEDFFFYRKSTPLDNVRTMKVIDAFIEPREMEEGHWPDDFHLSDHGFLTAQY 505 P + + T+ NILAPI+KR+DS RES + + +R+ +IID L+ ++ ++C+QE W+ +Y +RL + Y L ++ RTN RGDG+ V S +++ R +LF D GDRV L V Q L+VNTHLLFPH+ S +RLR+V KIL +I+ Y+ + +LGP+PI+ GD NGS +GQV ++LR +GFVS+++ A+ +W+SH +HR GVD+I+ L P PL W + VF I L AF + +D + I + F + L LG R L EEIE L+ D+D + +ID+KEF W + +E+ + I + + T E GA F V +A + P E+E G WP+++ LSDH LT + Sbjct: 24 PRDERCVSCTTFNILAPIYKRMDSENCRESQYRAYWFSRNEKIIDRLLADS-------------SSIICLQEVWLGNDELVDMYQKRL-GDANYTLFKLARTNNRGDGLLTAVHSSYFNVLNYRELLFNDFGDRVAQLLHVESAMPVLQNRSTRCVQQQSLIVNTHLLFPHDHSLSVVRLRQVYKILQYIEAYQEENKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDGEEDAHKWVSHRNHRGNICGVDFIWLLNPDKCRKPLKTSWNEAVFGIIKYLLLQVAFLSEENAFALLKADSPDDHITYSSFYQALSQLGMVHADR--LNSEEIEDLWGEADRDGDGVIDYKEFQQCIWSPNCCSQEEDDTEIDITDERIDTFEANDGAFGFT-------------------------VKEAVLFPPEVERGMWPENYSLSDHAPLTVVF 440 The following BLAST results are available for this feature:
BLAST of NO20G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02160 ID=NO20G02160|Name=NO20G02160|organism=Nannochloropsis oceanica|type=gene|length=3858bpback to top protein sequence of NO20G02160.3 >NO20G02160.3-protein ID=NO20G02160.3-protein|Name=NO20G02160.3|organism=Nannochloropsis oceanica|type=polypeptide|length=419bpback to top protein sequence of NO20G02160.2 >NO20G02160.2-protein ID=NO20G02160.2-protein|Name=NO20G02160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=419bpback to top protein sequence of NO20G02160.1 >NO20G02160.1-protein ID=NO20G02160.1-protein|Name=NO20G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bpback to top Synonyms
Publications
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