NO20G02150, NO20G02150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02150 vs. NCBI_GenBank
Match: EWM22022.1 (heat shock protein hsp20 [Nannochloropsis gaditana]) HSP 1 Score: 194.5 bits (493), Expect = 2.500e-46 Identity = 106/161 (65.84%), Postives = 115/161 (71.43%), Query Frame = 0 Query: 1 MALSRF---DPFGSMLTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAIVPNLSLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRKAIRV 159 MALSR+ DP GS L ER Q +VP+L+LDVKEKNNEF+VAIDAPGMKKEDFDVTF+NNVLRVACERKEEKEEEDARWHISERRWGS SRSVRLPR A + I AEYD+GVLKIHVPKTQ+SETRK IRV Sbjct: 1 MALSRYWRDDPLGSNLIER---DPFADFFSTGGGWLTPSVGGALSTGTSRGQPVVPSLNLDVKEKNNEFQVAIDAPGMKKEDFDVTFDNNVLRVACERKEEKEEEDARWHISERRWGSSSRSVRLPRTANGDGITAEYDSGVLKIHVPKTQESETRKTIRV 158
BLAST of NO20G02150 vs. NCBI_GenBank
Match: EWM28800.1 (heat shock protein hsp20 [Nannochloropsis gaditana]) HSP 1 Score: 96.3 bits (238), Expect = 9.300e-17 Identity = 42/106 (39.62%), Postives = 71/106 (66.98%), Query Frame = 0 Query: 53 PNLSLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRKAIRV 159 P++ +D+ E + EF + +D PG KKED D++ ++++L V ER+EE E+ +H+ ERR G RS+RLPR+A ++++A+Y GVL+I V K + K+I++ Sbjct: 33 PSMQMDISETDREFRIQVDLPGHKKEDIDISVDDDILTVQTERREEHSEDTENFHVKERRVGKAKRSIRLPRSADTDSVRAQYADGVLRICVEKKAEKGQSKSIKI 138
BLAST of NO20G02150 vs. NCBI_GenBank
Match: OQY88376.1 (hypothetical protein B6D39_11330 [Anaerolineae bacterium UTCFX2]) HSP 1 Score: 94.7 bits (234), Expect = 2.700e-16 Identity = 41/106 (38.68%), Postives = 75/106 (70.75%), Query Frame = 0 Query: 49 QAIVPNLSLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRK 155 Q + NL+LDV E ++E+ V+ PG+ +D ++T+++NVL + E +E++E ++ R+H+ ERR+GS SRS+ LP + + IKA+Y GVL +H+PK++++ ++ Sbjct: 36 QPMTWNLALDVAETDDEYRVSASLPGIDPDDLEITYDSNVLTIKGEMREDQEVKEERYHMRERRYGSFSRSISLPTSVKADKIKADYSKGVLTLHLPKSEEARPKR 141
BLAST of NO20G02150 vs. NCBI_GenBank
Match: OGO72027.1 (heat-shock protein Hsp20 [Chloroflexi bacterium RBG_19FT_COMBO_56_12]) HSP 1 Score: 92.8 bits (229), Expect = 1.000e-15 Identity = 46/105 (43.81%), Postives = 69/105 (65.71%), Query Frame = 0 Query: 54 NLSLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRK-AIR 158 +L+LDV E +EF V PG+ +D ++TF NN L + E KEEK+ E A +H+ ERR+GS +RS+ LP + I+A Y+ GVLK+ +PK ++ + +K AIR Sbjct: 39 DLALDVTESEDEFTVKASLPGINPDDLEITFTNNTLTIKGETKEEKDVEKAHYHLRERRYGSFARSITLPAGIETDKIQANYEVGVLKLRLPKAEEVKPKKIAIR 143
BLAST of NO20G02150 vs. NCBI_GenBank
Match: PKL36239.1 (hypothetical protein CVV44_18670 [Spirochaetae bacterium HGW-Spirochaetae-1]) HSP 1 Score: 91.3 bits (225), Expect = 3.000e-15 Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 0 Query: 57 LDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRK 155 LDV+E V + PG+ ++D DVT ENNVL +A E+K EKEE+D R+ ISERR+GS SRS+ LP + IKA + GVL + +P+ + ++ RK Sbjct: 47 LDVQEDAKAITVKAEIPGIDEKDLDVTLENNVLTIAGEKKLEKEEKDKRYTISERRFGSFSRSISLPEGVSPDRIKAAFKNGVLSVTIPRDESAQPRK 144
BLAST of NO20G02150 vs. NCBI_GenBank
Match: EPZ32380.1 (Alpha crystallin/Hsp20 domain-containing protein [Rozella allomycis CSF55]) HSP 1 Score: 90.9 bits (224), Expect = 3.900e-15 Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 51 IVPNLSLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRKAIRV 159 I P L+LD+ E +N + + D PG+ KED V E+NVL V ER+++++E + H++ER +G RSVRLP E +A D GVLK+ V K++ +E RK I + Sbjct: 40 IKPQLALDISELDNAYVIQADLPGIAKEDISVNLEDNVLTVETERRDQRDENNGTIHLTERFYGKMKRSVRLPAQVDPEKTEATLDNGVLKLRVAKSEAAEKRKCIAI 147
BLAST of NO20G02150 vs. NCBI_GenBank
Match: WP_068874861.1 (MULTISPECIES: Hsp20/alpha crystallin family protein [Phenylobacterium]) HSP 1 Score: 90.9 bits (224), Expect = 3.900e-15 Identity = 41/102 (40.20%), Postives = 72/102 (70.59%), Query Frame = 0 Query: 57 LDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRKAIRV 159 LDVKE + E+ V+++ PG+ +ED +V ++++L V E+KEE+E E A H++ERR+G RS+RLP++ + +KA D GVL+I +PK+++ +++ + V Sbjct: 52 LDVKETDKEYRVSVELPGVAEEDIEVDVDDDLLTVRAEKKEEREVERADQHVTERRFGVLQRSIRLPQSVEAQAVKATLDNGVLRIAIPKSERQASKRRVPV 153
BLAST of NO20G02150 vs. NCBI_GenBank
Match: WP_015947104.1 (Hsp20/alpha crystallin family protein [Desulfatibacillum alkenivorans] >ACL04030.1 heat shock protein Hsp20 [Desulfatibacillum alkenivorans AK-01]) HSP 1 Score: 89.7 bits (221), Expect = 8.700e-15 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 56 SLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRK 155 SLDV E E+ V + PG+ KED D++ +L + E+K+EK+EE +H+ ER +GS SRS+R+P +KAE GVLKI +PKT++ +TRK Sbjct: 42 SLDVAENEGEYVVTAEIPGLAKEDIDISLSEGLLTIKGEKKQEKKEETDTYHVVERSYGSFSRSLRVPNGVDLGGVKAETADGVLKIVLPKTEEEKTRK 140
BLAST of NO20G02150 vs. NCBI_GenBank
Match: WP_028313452.1 (Hsp20/alpha crystallin family protein [Desulfatibacillum aliphaticivorans]) HSP 1 Score: 89.7 bits (221), Expect = 8.700e-15 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 56 SLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRK 155 SLDV E E+ V + PG+ KED D++ +L + E+K+EK+EE +H+ ER +GS SRS+R+P +KAE GVLKI +PKT++ +TRK Sbjct: 42 SLDVAENEGEYVVTAEIPGLAKEDIDISLSEGLLTIKGEKKQEKKEETDTYHVVERSYGSFSRSLRVPNGVDLGGVKAETADGVLKIVLPKTEEEKTRK 140
BLAST of NO20G02150 vs. NCBI_GenBank
Match: OGP94089.1 (molecular chaperone [Deltaproteobacteria bacterium RBG_16_47_11]) HSP 1 Score: 89.7 bits (221), Expect = 8.700e-15 Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 0 Query: 56 SLDVKEKNNEFEVAIDAPGMKKEDFDVTFENNVLRVACERKEEKEEEDARWHISERRWGSCSRSVRLPRAAGCENIKAEYDAGVLKIHVPKTQKSETRKAIRVE 160 SLDV E + V + PGM + D++F + +L V E K+EKEE+D +H+ ERR+GS SRSVRLP + IKA Y GVLKI +PK+++++ +K I+++ Sbjct: 45 SLDVSETKDNIMVKAELPGMDPKKIDISFADGILTVKGENKQEKEEKDENYHMVERRYGSFSRSVRLPHEVKSDKIKANYKEGVLKITLPKSEEAK-KKEIKIK 147 The following BLAST results are available for this feature:
BLAST of NO20G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02150 ID=NO20G02150|Name=NO20G02150|organism=Nannochloropsis oceanica|type=gene|length=2432bpback to top protein sequence of NO20G02150.1 >NO20G02150.1-protein ID=NO20G02150.1-protein|Name=NO20G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=160bpback to top Synonyms
Publications
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