NO20G02110, NO20G02110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02110 vs. NCBI_GenBank
Match: EWM22025.1 (retinoblastoma binding protein 9 [Nannochloropsis gaditana]) HSP 1 Score: 313.5 bits (802), Expect = 4.600e-82 Identity = 142/189 (75.13%), Postives = 165/189 (87.30%), Query Frame = 0 Query: 2 PSTSTAAHRLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKLSGD 191 P + + RLVIVPGNGGG+VT+ANWYGWAQR+LA LPGIEEV L+NMPDPYTARES+WLPFMK++LKCDAST++IGHSSGAEAAMRFAE++RVAGLVLVSACVTDLG+ANERASGYY+RPW W IK NAGF++QFGS+DDPFIPW E QAVHEG GS L+A SEGH+MT FP L++ L A+L D Sbjct: 27 PKMALSTRRLVIVPGNGGGEVTRANWYGWAQRALADLPGIEEVQLENMPDPYTARESVWLPFMKDRLKCDASTVVIGHSSGAEAAMRFAESHRVAGLVLVSACVTDLGDANERASGYYNRPWRWTEIKANAGFVLQFGSADDPFIPWEEQQAVHEGIGSTLFAYKSEGHFMTPTFPRLREALRAQLLAD 215
BLAST of NO20G02110 vs. NCBI_GenBank
Match: OWF46054.1 (hydrolase RBBP9 [Mizuhopecten yessoensis]) HSP 1 Score: 240.0 bits (611), Expect = 6.400e-60 Identity = 109/178 (61.24%), Postives = 133/178 (74.72%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKL 188 ++ I+PGNG GDV ANWYGWA + +PG+ L+NMPDP TARESIW+PFM+ ++ CD STIIIGHSSGAEAAMRFAE +V G++LVSAC+TDLG+ NER SGYYSRPW WE+IK N FI+QFGS+DDPFI W EHQ V +G S L+ GH+M FP L V+ +KL Sbjct: 74 KVAIIPGNGAGDVFSANWYGWAYEKINDIPGV-TADLRNMPDPITARESIWIPFMRGEMSCDESTIIIGHSSGAEAAMRFAEKYKVKGIILVSACITDLGDENERESGYYSRPWEWEKIKANTEFIVQFGSTDDPFIQWEEHQQVADGLQSALHKFSDRGHFMNSVFPELINVVKSKL 250
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_021362478.1 (putative hydrolase RBBP9 [Mizuhopecten yessoensis] >XP_021362479.1 putative hydrolase RBBP9 [Mizuhopecten yessoensis]) HSP 1 Score: 240.0 bits (611), Expect = 6.400e-60 Identity = 109/178 (61.24%), Postives = 133/178 (74.72%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKL 188 ++ I+PGNG GDV ANWYGWA + +PG+ L+NMPDP TARESIW+PFM+ ++ CD STIIIGHSSGAEAAMRFAE +V G++LVSAC+TDLG+ NER SGYYSRPW WE+IK N FI+QFGS+DDPFI W EHQ V +G S L+ GH+M FP L V+ +KL Sbjct: 2 KVAIIPGNGAGDVFSANWYGWAYEKINDIPGV-TADLRNMPDPITARESIWIPFMRGEMSCDESTIIIGHSSGAEAAMRFAEKYKVKGIILVSACITDLGDENERESGYYSRPWEWEKIKANTEFIVQFGSTDDPFIQWEEHQQVADGLQSALHKFSDRGHFMNSVFPELINVVKSKL 178
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_011421963.1 (PREDICTED: putative hydrolase RBBP9 isoform X3 [Crassostrea gigas] >EKC17187.1 Putative hydrolase RBBP9 [Crassostrea gigas]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 105/178 (58.99%), Postives = 135/178 (75.84%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKL 188 ++ I+PGNG GDV ANWYGWA + + + + L+NMPDP TA+ESIW+PFM+E+++CD +T+IIGHSSGAEAAMRFAE +V G++LVSACVTDLG+ NERASGYYSRPW W IK N F++QFGS+DDPFIPW E QAV +G S+L +GH+M FP L +V+ K+ Sbjct: 2 KVAIIPGNGAGDVFHANWYGWAHKQINKMENV-SCDLRNMPDPITAKESIWIPFMREQMECDENTVIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDLGDDNERASGYYSRPWDWTSIKANTDFVVQFGSTDDPFIPWEEQQAVADGLSSDLRKFSDKGHFMNSSFPQLMEVVKEKI 178
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_011421961.1 (PREDICTED: putative hydrolase RBBP9 isoform X2 [Crassostrea gigas]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 105/178 (58.99%), Postives = 135/178 (75.84%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKL 188 ++ I+PGNG GDV ANWYGWA + + + + L+NMPDP TA+ESIW+PFM+E+++CD +T+IIGHSSGAEAAMRFAE +V G++LVSACVTDLG+ NERASGYYSRPW W IK N F++QFGS+DDPFIPW E QAV +G S+L +GH+M FP L +V+ K+ Sbjct: 14 KVAIIPGNGAGDVFHANWYGWAHKQINKMENV-SCDLRNMPDPITAKESIWIPFMREQMECDENTVIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDLGDDNERASGYYSRPWDWTSIKANTDFVVQFGSTDDPFIPWEEQQAVADGLSSDLRKFSDKGHFMNSSFPQLMEVVKEKI 190
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_011421960.2 (PREDICTED: putative hydrolase RBBP9 isoform X1 [Crassostrea gigas]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 105/178 (58.99%), Postives = 135/178 (75.84%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKL 188 ++ I+PGNG GDV ANWYGWA + + + + L+NMPDP TA+ESIW+PFM+E+++CD +T+IIGHSSGAEAAMRFAE +V G++LVSACVTDLG+ NERASGYYSRPW W IK N F++QFGS+DDPFIPW E QAV +G S+L +GH+M FP L +V+ K+ Sbjct: 24 KVAIIPGNGAGDVFHANWYGWAHKQINKMENV-SCDLRNMPDPITAKESIWIPFMREQMECDENTVIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDLGDDNERASGYYSRPWDWTSIKANTDFVVQFGSTDDPFIPWEEQQAVADGLSSDLRKFSDKGHFMNSSFPQLMEVVKEKI 200
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_013381212.1 (putative hydrolase RBBP9 [Lingula anatina] >XP_013381213.1 putative hydrolase RBBP9 [Lingula anatina]) HSP 1 Score: 237.7 bits (605), Expect = 3.200e-59 Identity = 105/168 (62.50%), Postives = 130/168 (77.38%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFP 178 R+VI+PGNG GDV ANWYGW L + I L+NMPDP TARES+W+PFMKE LKCD STII+GHSSGA+AAMR+AE +V G+++VS CVTDLG+ NERASGYY+RPW WE+I+ NA F++QFGS+DDPFIPW E Q VH+G S+L+ + +GH M FP Sbjct: 4 RVVIIPGNGAGDVYHANWYGWLHNKLNTKENI-PCALENMPDPVTARESVWIPFMKETLKCDESTIIVGHSSGAQAAMRYAEKYKVLGIIVVSGCVTDLGDENERASGYYNRPWEWEKIRANATFVLQFGSTDDPFIPWEEQQQVHQGLQSKLHKYEDKGHCMNSTFP 170
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_022321898.1 (LOW QUALITY PROTEIN: putative hydrolase RBBP9 [Crassostrea virginica]) HSP 1 Score: 236.5 bits (602), Expect = 7.100e-59 Identity = 105/178 (58.99%), Postives = 132/178 (74.16%), Query Frame = 0 Query: 10 RLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVLGAKL 188 ++ I+PGNG GDV ANWYGWA + + + I LQNMPDP TARESIW+PFM++ + CD TIIIGHSSGAEAAMRFAE +V G++LVSACVTD G+ NE+ASGYYSRPW W IK+N F++QFGS+DDPF+PW E QAV +G S+L +GH+M FP L +++ KL Sbjct: 2 KITIIPGNGAGDVFHANWYGWAHKQINKMENI-SCDLQNMPDPITARESIWIPFMRDHMGCDEDTIIIGHSSGAEAAMRFAEKYKVKGIILVSACVTDXGDDNEKASGYYSRPWDWAAIKSNTDFVVQFGSTDDPFMPWEEQQAVADGLNSDLQKFSDKGHFMNSSFPQLLQIVKEKL 178
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_002606619.1 (hypothetical protein BRAFLDRAFT_277797 [Branchiostoma floridae] >EEN62629.1 hypothetical protein BRAFLDRAFT_277797 [Branchiostoma floridae]) HSP 1 Score: 234.6 bits (597), Expect = 2.700e-58 Identity = 104/176 (59.09%), Postives = 135/176 (76.70%), Query Frame = 0 Query: 8 AHRLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVL 184 A R VIVPGNG GDV +NWY W + +L +P + L+NMPDP ARE+IW+PFM+E+L+CD TI+IGHSSGAEAA+R+AE +V G+VLVSACVTDLG+ NERASGYYSRPW W+++K N +++QFGS DDPFIPW E Q V +G +EL+ + GH+M+ DFP L +V+ Sbjct: 5 AERAVIVPGNGAGDVYNSNWYDWVKSNLDDIPNF-QCTLKNMPDPVMARENIWIPFMREELQCDERTIVIGHSSGAEAAIRYAEQYQVFGIVLVSACVTDLGDENERASGYYSRPWQWDKVKANTRWVVQFGSRDDPFIPWEEQQQVAQGLSTELHKFANRGHFMSYDFPELVEVV 179
BLAST of NO20G02110 vs. NCBI_GenBank
Match: XP_005111078.1 (PREDICTED: putative hydrolase RBBP9 isoform X1 [Aplysia californica]) HSP 1 Score: 233.8 bits (595), Expect = 4.600e-58 Identity = 109/183 (59.56%), Postives = 133/183 (72.68%), Query Frame = 0 Query: 1 MPSTSTAAHRLVIVPGNGGGDVTQANWYGWAQRSLASLPGIEEVLLQNMPDPYTARESIWLPFMKEKLKCDASTIIIGHSSGAEAAMRFAETNRVAGLVLVSACVTDLGNANERASGYYSRPWGWERIKNNAGFIIQFGSSDDPFIPWNEHQAVHEGTGSELYASDSEGHYMTVDFPLLKKVL 184 +P S R VIVPGNG GDV +ANWYGW R L E L+NMPDP TARES+WLPFM+++L+CD +T+I+GHSSGAEAAMR+AE+++V +VLVSACVTDLG+ NE ASGYY+RPW WE IK N I QFGS+DD FIPW+E Q V EG S+L+ +GH+M FP L K L Sbjct: 41 VPMASCNKVRFVIVPGNGAGDVHRANWYGWLFRKLCDAG--MECCLENMPDPITARESVWLPFMEKELRCDENTVIVGHSSGAEAAMRYAESHKVYSIVLVSACVTDLGDPNEAASGYYNRPWDWESIKGNVKVIAQFGSTDDSFIPWSEQQQVVEGLSSKLFEFSDKGHFMNSQFPQLLKYL 221 The following BLAST results are available for this feature:
BLAST of NO20G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02110 ID=NO20G02110|Name=NO20G02110|organism=Nannochloropsis oceanica|type=gene|length=597bpback to top protein sequence of NO20G02110.1 >NO20G02110.1-protein ID=NO20G02110.1-protein|Name=NO20G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=199bpback to top Synonyms
Publications
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