NO20G02100, NO20G02100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02100 vs. NCBI_GenBank
Match: XP_018120603.1 (PREDICTED: anaphase-promoting complex subunit 1-like isoform X1 [Xenopus laevis] >OCT77769.1 hypothetical protein XELAEV_18028864mg [Xenopus laevis]) HSP 1 Score: 72.0 bits (175), Expect = 1.100e-8 Identity = 65/279 (23.30%), Postives = 104/279 (37.28%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLW---RPLGGPNVYKQWTFSTPVLQALWAYFSL----------DGGKARCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W + VYK +T +PV+QALW F++ +G +C+CVL+ S + V+ +G Y LP Q +W K GLL +R + E P R EP+P++FS+ HPL+E+ P+ G G S+V + + D R++FT ++++TY++ G H VW EE+ Sbjct: 89 YDEELYVAGN--MVIWSKGSKIQASTVYKAFTVDSPVVQALWCDFTISNDTNDNESDEGKLEKCVCVLQ-SSCINVHNTDGKDYIAPLPFQVANVWPT-KYGLLFERS---------------------------------------SNSTLHEVPQSPPR---------------EPLPTIFSMLHPLDEITPLVSRSGGIFGSSRVHY----------VSDPTLRIVFTH------------------SDPSMVMTYDNVQGSHTVWALRKVKAEEQ 281
BLAST of NO20G02100 vs. NCBI_GenBank
Match: NP_001072866.1 (anaphase-promoting complex subunit 1 [Xenopus tropicalis] >AAI23938.1 anaphase promoting complex subunit 1 [Xenopus tropicalis] >OCA33348.1 hypothetical protein XENTR_v90013268mg [Xenopus tropicalis]) HSP 1 Score: 71.6 bits (174), Expect = 1.400e-8 Identity = 66/279 (23.66%), Postives = 103/279 (36.92%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLW---RPLGGPNVYKQWTFSTPVLQALWAYFSL----------DGGKARCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W + VYK +T +PV+QALW F++ +G +C+CVL+ S + V+ +G Y LP Q +W K GLL +R + E P R EP+P++FS+ HPL+E+ P+ G G S+V + + D R++FT +I++TY+ G H VW EE+ Sbjct: 89 YDEELYVAGN--VVIWSKGSKIQASTVYKAFTVDSPVVQALWCDFTIFNDKNDNETDEGKLEKCVCVLQ-SSCINVHNTDGKDYIAPLPFQVANVWPT-KYGLLFERN---------------------------------------SNSTLHEVPQSPPR---------------EPLPTIFSMLHPLDEITPLVSRSGGIFGSSRVHY----------VSDPTLRIVFTH------------------SDPSIVMTYDTVQGSHTVWALRKVKAEEQ 281
BLAST of NO20G02100 vs. NCBI_GenBank
Match: XP_023350593.1 (anaphase-promoting complex subunit 1 [Sarcophilus harrisii]) HSP 1 Score: 70.5 bits (171), Expect = 3.100e-8 Identity = 68/279 (24.37%), Postives = 105/279 (37.63%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLW---RPLGGPNVYKQWTFSTPVLQALWAYFSLDGGKA----------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W VYK +T +PVLQALW F + K+ +C+C+L+ S + V+ EG Y +LP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ PV G G S+V + + D+ +++F PS II+TY+ G H +W+ EE+ Sbjct: 89 YDEELYVAGN--MVIWSKGSKSQASTVYKAFTVDSPVLQALWCDFIISQDKSEKYDNSNEVEKCICILQ-SSCINVHSMEGKDYIASLPFQVANVWPT-KYGLLFERSSSAHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPVVCKSGGLFGTSRVQY----------VADSAMKIVFLN--AEPS----------------IIMTYDAIQGLHSLWILRRVKPEEQ 279
BLAST of NO20G02100 vs. NCBI_GenBank
Match: KFV87446.1 (Anaphase-promoting complex subunit 1, partial [Struthio camelus australis]) HSP 1 Score: 70.1 bits (170), Expect = 4.100e-8 Identity = 70/283 (24.73%), Postives = 106/283 (37.46%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLWRPLGGPN----VYKQWTFSTPVLQALWAYFSLDGGKA-------------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W G N VYK +T +PVLQALW F++ K+ +C+C+L++S + V+ EG Y ALP Q +W K GLL +R + EM P R EP+P++FS+ HPL+E+ P+ G G ++V + + D R++F PS I++TY+ H VW EE+ Sbjct: 19 YDEELYVASN--MVIWSK-GSKNQASTVYKAFTVDSPVLQALWCDFTIPQEKSEKPEVSGSDEIVEKCICILQNS-CINVHSIEGKDYIAALPFQVANVWPT-KYGLLFERSSSSHEM-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGVFGSARVQY----------VADYTMRIVFLN--AEPS----------------IVMTYDTVQSLHTVWSLRRVKPEEQ 212
BLAST of NO20G02100 vs. NCBI_GenBank
Match: KFZ69072.1 (Anaphase-promoting complex subunit 1, partial [Podiceps cristatus]) HSP 1 Score: 70.1 bits (170), Expect = 4.100e-8 Identity = 70/281 (24.91%), Postives = 106/281 (37.72%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLWRPLGGPN----VYKQWTFSTPVLQALWAYFSLDGGKA-----------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W G N VYK +T +PVLQALW F + KA +C+C+L++S + V+ EG Y ALP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ P+ G G ++V + + D R++F + PS I++TY+ H VW EE+ Sbjct: 19 YDEELYVASN--MVIWSK-GSKNQASTVYKAFTVDSPVLQALWCDFIVPQDKAEKADGSDETVEKCICILQNS-CINVHSIEGKDYIAALPFQVANVWPT-KYGLLFERSSSSHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGVFGSARVQY----------VADYTLRIVFLD--AEPS----------------IVMTYDTVQSLHTVWALRRVKPEEQ 210
BLAST of NO20G02100 vs. NCBI_GenBank
Match: XP_009984178.1 (PREDICTED: anaphase-promoting complex subunit 1, partial [Tauraco erythrolophus]) HSP 1 Score: 68.9 bits (167), Expect = 9.100e-8 Identity = 66/279 (23.66%), Postives = 104/279 (37.28%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLWRP---LGGPNVYKQWTFSTPVLQALWAYFSLDGGKA----------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W VYK +T +PVLQALW F++ KA +C+C+L++S + V+ EG Y ALP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ P+ G G ++V + + D R++F + +I++TY+ H VW EE+ Sbjct: 22 YDEELYVASN--VVVWSKGSRSQASAVYKAFTVDSPVLQALWCDFTIPQEKAEKAGSDEIVEKCICILQNS-CINVHSIEGKDYIAALPFQVANVWPT-KYGLLFERSSSSHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGVFGSARVQY----------VADYTMRIVFLD------------------ADPSIVMTYDTVQSLHTVWALRRVKPEEQ 212
BLAST of NO20G02100 vs. NCBI_GenBank
Match: XP_013046559.1 (PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit 1 [Anser cygnoides domesticus]) HSP 1 Score: 68.9 bits (167), Expect = 9.100e-8 Identity = 69/283 (24.38%), Postives = 107/283 (37.81%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLWRPLGGPN----VYKQWTFSTPVLQALWAYFSLDGGKA-------------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W G N VYK +T +PVLQALW F++ K+ +C+C+L++S + V+ EG Y ALP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ P+ G G ++V + + D R++F S E +I++TY+ H VW EE+ Sbjct: 79 YDEELYVASN--MVIWSK-GSKNQASTVYKAFTVDSPVLQALWCDFTIPQEKSEKVDVSGSDEIVEKCICILQNS-CINVHSIEGKDYIAALPFQVANVWPT-KFGLLFERSSSSHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGVFGSARVQY----------VADYTMRIVFL------SAE------------PSIVMTYDTVQSLHTVWALRRVKPEEQ 272
BLAST of NO20G02100 vs. NCBI_GenBank
Match: EOB01808.1 (Anaphase-promoting complex subunit 1, partial [Anas platyrhynchos]) HSP 1 Score: 68.6 bits (166), Expect = 1.200e-7 Identity = 69/283 (24.38%), Postives = 107/283 (37.81%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLWRPLGGPN----VYKQWTFSTPVLQALWAYFSLDGGKA-------------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W G N VYK +T +PVLQALW F++ K+ +C+C+L++S + V+ EG Y ALP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ P+ G G ++V + + D R++F S E +I++TY+ H VW EE+ Sbjct: 18 YDEELYVASN--MVIWSK-GSKNQASTVYKAFTVDSPVLQALWCDFTIAPEKSEKADVSGSDEIVEKCICILQNS-CINVHSIEGKDYIAALPFQVANVWPT-KFGLLFERSSSSHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGVFGSARVQY----------VADYTMRIVFL------SAE------------PSIVMTYDTIQSLHTVWALRRVKPEEQ 211
BLAST of NO20G02100 vs. NCBI_GenBank
Match: KFV17848.1 (Anaphase-promoting complex subunit 1, partial [Tauraco erythrolophus]) HSP 1 Score: 68.6 bits (166), Expect = 1.200e-7 Identity = 66/280 (23.57%), Postives = 104/280 (37.14%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLWRP---LGGPNVYKQWTFSTPVLQALWAYFSLDGGKA-----------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W VYK +T +PVLQALW F++ KA +C+C+L++S + V+ EG Y ALP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ P+ G G ++V + + D R++F + +I++TY+ H VW EE+ Sbjct: 19 YDEELYVASN--VVVWSKGSRSQASAVYKAFTVDSPVLQALWCDFTIPQEKAEKAGGSDEIVEKCICILQNS-CINVHSIEGKDYIAALPFQVANVWPT-KYGLLFERSSSSHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGVFGSARVQY----------VADYTMRIVFLD------------------ADPSIVMTYDTVQSLHTVWALRRVKPEEQ 210
BLAST of NO20G02100 vs. NCBI_GenBank
Match: XP_007476644.1 (PREDICTED: anaphase-promoting complex subunit 1 isoform X1 [Monodelphis domestica] >XP_016281350.1 PREDICTED: anaphase-promoting complex subunit 1 isoform X1 [Monodelphis domestica]) HSP 1 Score: 68.2 bits (165), Expect = 1.500e-7 Identity = 65/279 (23.30%), Postives = 104/279 (37.28%), Query Frame = 0 Query: 46 HDEELYLTPDHRRVLW---RPLGGPNVYKQWTFSTPVLQALWAYFSLDGGKA----------RCLCVLRDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLEIGKGEVEKEEEGEAAVLMLGEDXXXXXXXXXXVMEEGPGGGVRRIGEEEEMATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQPVLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRVWLAHPTSTEEE 312 +DEELY+ + V+W VYK +T +PVLQALW F + K+ +C+C+L+ S + V+ EG Y +LP Q +W K GLL +R + E+ P R EP+P++FS+ HPL+E+ P+ G G S+V + + D+ +++F +II+TY+ G H +W+ EE+ Sbjct: 89 YDEELYVAGN--MVIWSKGSKSQASAVYKAFTVDSPVLQALWCDFIISQDKSEKADSISEVEKCICILQ-SSCINVHSMEGKDYIASLPFQVANVWPT-KYGLLFERSSSAHEV-----------------------------------------PPSPPR---------------EPLPTMFSMLHPLDEITPLVCKSGGLFGTSRVQY----------VADSAMKIVFL------------------NTDPSIIMTYDAIQGLHSLWILRRVKPEEQ 279 The following BLAST results are available for this feature:
BLAST of NO20G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02100 ID=NO20G02100|Name=NO20G02100|organism=Nannochloropsis oceanica|type=gene|length=3327bpback to top protein sequence of NO20G02100.1 >NO20G02100.1-protein ID=NO20G02100.1-protein|Name=NO20G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=916bpback to top Synonyms
Publications
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