NO20G01840, NO20G01840 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G01840
Unique Name	NO20G01840
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1797
Alignment location	chr20:552164..553960 +

Link to JBrowse

Properties


Property Name	Value
Description	Phytoene synthase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:552164..553960 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0009987	cellular process
GO:0009058	biosynthetic process
GO:0006629	lipid metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0016740	transferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR008949	Isoprenoid_synthase_dom
IPR002060	Squ/phyt_synthse

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: EWM22037.1 (phytoene synthase [Nannochloropsis gaditana])

HSP 1 Score: 676.8 bits (1745), Expect = 6.200e-191
Identity = 384/502 (76.49%), Postives = 428/502 (85.26%), Query Frame = 0

Query:   96 GASVWIGLCVAAALVLLVASSATAFVTSP-VPRGPASSSRYSGEVGRRYVASKISSGSGVMS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMHPHSATGSPSTLQPSKSLLAGSALGGVQAAVDTSRSKNTVTRAVATTASSGGYVPKQMAPQQPMATSQSPPVVVNTPNVIPPSILWGEGGHIASSGVTGGVEVPGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIVENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGK 596
            G  +++GL +  A +      ATAF++ P VP  P + +  +  +GRRYVASKIS+G+G+ S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             LQP KSL+  S+LG  QA+VDTSRSKNT+TRAVA+TAS+GGYVP  +AP QP  +  +P   + T + IPP +LWGE G +ASSG  GGVE+P D E   ALL EAY+ECQRITSIYAKTFYMGTSFLDYAKRSATW+IYVWCRRTDDIVDSPRAIVENTMDADLE W++RLDD+W +RPWD+LDATLCDVR RYP MSIEPY+DMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPG+++KQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDL RF VTEDQIMNKIMNSNYRE+IKFQIARARVYFDRAEEGI MLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILP SWMKT+++G+
Sbjct:   96 GHLIFVGLLMVVAAMSWAPLPATAFMSPPSVPAIPRTLA--TRVIGRRYVASKISAGAGIKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQPPKSLMTASSLGSQQASVDTSRSKNTITRAVASTASAGGYVPNSIAPPQPQVSPPAPQAPL-TSDAIPPDVLWGESGRMASSGSVGGVELPVDEEHRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGR 594

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ36000.1 (phytoene synthetase [Sargassum vachellianum])

HSP 1 Score: 411.0 bits (1055), Expect = 6.400e-111
Identity = 191/306 (62.42%), Postives = 246/306 (80.39%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P D ++ + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + ++  DLE W+ RL+D+W  +P D+LD  L DVR  YP++ IEP+KDMI GMVMDVPG+G++RY TFEEL LYCYRVAGTVGLM LP++GTAPG + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLED+ +FGV  D IMN I++ NY+E +++QIARAR Y+ +A  GI ML+P ARLPV++SLDMY +IL  IE+N+YDNFR+RAY+SK EKLL LP S+++++N GK+
Sbjct:  153 PADIQRRRTVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAIWAIYVWCRRTDDIVDGPRAMVRGKKSLQKDLEDWSSRLEDVWEGKPRDSLDLALVDVREVYPTLPIEPFKDMIDGMVMDVPGIGKNRYKTFEELELYCYRVAGTVGLMVLPVLGTAPGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDMEKFGVDPDNIMNGILDDNYKEFMRYQIARARFYYQQAARGIPMLAPQARLPVQASLDMYSKILEVIENNNYDNFRNRAYISKVEKLLTLPFSYLRSLNPGKI 458

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ36001.1 (phytoene synthetase [Sargassum henslowianum])

HSP 1 Score: 411.0 bits (1055), Expect = 6.400e-111
Identity = 191/306 (62.42%), Postives = 246/306 (80.39%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P D ++ + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + ++  DLE W+ RL+D+W  +P D+LD  L DVR  YP++ IEP+KDMI GMVMDVPG+G++RY TFEEL LYCYRVAGTVGLM LP++GTAPG + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLED+ +FGV  D IMN I++ NY+E +++QIARAR Y+ +A  GI ML+P ARLPV++SLDMY +IL  IE+N+YDNFR+RAY+SK EKLL LP S+++++N GK+
Sbjct:   62 PADIQRRRTVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAIWAIYVWCRRTDDIVDGPRAMVRGKKSLQKDLEDWSSRLEDVWEGKPRDSLDLALVDVREVYPTLPIEPFKDMIDGMVMDVPGIGKNRYKTFEELELYCYRVAGTVGLMVLPVLGTAPGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDMEKFGVDPDNIMNGILDDNYKEFMRYQIARARFYYQQAARGIPMLAPQARLPVQASLDMYSKILEVIENNNYDNFRNRAYISKVEKLLTLPFSYLRSLNPGKI 367

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ36002.1 (phytoene synthetase [Sargassum hemiphyllum var. chinense])

HSP 1 Score: 410.2 bits (1053), Expect = 1.100e-110
Identity = 191/306 (62.42%), Postives = 248/306 (81.05%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P D ++ + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + ++  DLE W+ RL+D+WA +P D+LD  L DVR  YP++ IEP+KDMI GMVMDVPG+G++RY TFEEL LYCYRVAGTVGLM LP++GTAPG + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLED+ +FGV  + IMN I++ NY+E +++QIARAR Y+ +A  GI ML+P ARLPV++SLDMY +IL+ IE+N+YDNFR+RAY+SK EKLL LP S+++++N GK+
Sbjct:   62 PADIQRRRTVLNQAYQECERITGIFAKTFYLGTKFMPPEARKAIWAIYVWCRRTDDIVDGPRAMVRGKKSLQKDLEDWSSRLEDVWAGKPRDSLDLALVDVREIYPTLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPVLGTAPGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDMKKFGVDPENIMNGILDENYKEFMRYQIARARFYYQQAARGIPMLAPQARLPVQASLDMYGKILDVIENNNYDNFRNRAYISKVEKLLTLPFSYLRSLNPGKI 367

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ35998.1 (phytoene synthetase [Sargassum thunbergii] >ATQ35999.1 phytoene synthetase [Sargassum horneri])

HSP 1 Score: 409.5 bits (1051), Expect = 1.800e-110
Identity = 190/306 (62.09%), Postives = 247/306 (80.72%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P D ++ + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + ++  DLE W+ RL+D+WA +P D+LD  L DVR  YP++ IEP+KDMI GMVMDVPG+G++RY TFEEL LYCYRVAGTVGLM LP++GTAPG + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLED+ +FGV  + IMN I++ NY++ +++QIARAR Y+ +A  GI ML+P ARLPV++SLDMY +IL+ IE N+YDNFR+RAY+SK EKLL LP S+++++N GK+
Sbjct:  153 PADIQRRRTVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAIWAIYVWCRRTDDIVDGPRAMVRGKKSLQKDLEDWSSRLEDVWAGKPRDSLDLALVDVREIYPTLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPVLGTAPGVSEEDAKYPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDMKKFGVDPENIMNGILDENYKKFMRYQIARARFYYQQAARGIPMLAPQARLPVQASLDMYGKILDVIESNNYDNFRNRAYISKVEKLLTLPFSYLRSLNPGKI 458

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ35992.1 (phytoene synthetase [Ishige okamurae])

HSP 1 Score: 407.1 bits (1045), Expect = 9.200e-110
Identity = 190/306 (62.09%), Postives = 243/306 (79.41%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            PG+A++ + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V    ++  DL+ W  RL ++W  +P DALD  + DVR  YPS+ I P+KDMI GMVMDVPG+G++RY+TFEEL LYCYRVAGTVGLM LPI+GTA G + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLP+EDL RFG+  + IMN I+++NY+ M+K+QIARAR Y+ +A  GI ML+P++RLPV++SLDMY +IL  IE NDYDNFR RAY+SK EKLL LP SW +++N G++
Sbjct:  114 PGEAQRRRVVLDQAYQECERITGIFAKTFYLGTKFMAPVARKAVWAIYVWCRRTDDIVDGPRAMVRGRKSLQNDLQDWTNRLQEVWEGKPRDALDLAMVDVRQNYPSLPIAPFKDMIDGMVMDVPGIGKNRYSTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPMEDLERFGIDPENIMNGILDANYKAMMKYQIARARFYYKQAARGIPMLAPESRLPVQASLDMYGKILEAIEANDYDNFRKRAYISKTEKLLTLPLSWWRSLNPGQV 419

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ35994.1 (phytoene synthetase [Punctaria latifolia])

HSP 1 Score: 403.3 bits (1035), Expect = 1.300e-108
Identity = 192/306 (62.75%), Postives = 240/306 (78.43%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P +A + + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + +M  DL  W  RLDD+W  +P D+LD  L DVR  YP++ I P+KDMI GM+MDVPG+G++RY TFEEL LYCYRVAGTVGLM LPI+GTA G + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLEDL +FGV  + IMN I++SNY+E++K+QIARAR Y+ +A  GI MLSP+ RLPV++SLDMY +IL  IE N YDNFR RAY+SK EKLL LP S+ K++N G++
Sbjct:  159 PAEANRRRTVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAVWAIYVWCRRTDDIVDGPRAMVRGKKSMQRDLTDWAVRLDDVWRGKPRDSLDLALVDVRENYPTLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDLEKFGVDPENIMNGILDSNYKELMKYQIARARFYYKQAARGIPMLSPEGRLPVQASLDMYGKILTAIEANGYDNFRKRAYISKTEKLLTLPFSYAKSLNPGQV 464

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: CBJ31337.1 (Phytoene synthase; chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 402.5 bits (1033), Expect = 2.300e-108
Identity = 191/306 (62.42%), Postives = 241/306 (78.76%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P +  + +A+L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + +M  DL  W  RL+++W  +P DALD  L DVR  YPS+ I P+KDMI GM+MDVPG+G++RY TFEEL LYCYRVAGTVGLM LPI+GTA G + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLEDL +FGV  + IMN I++SNY+E++++QIARAR Y+ +A  GI MLSP+ RLPV++SLDMY +IL  IE N+YDNFR RAY+SK EKLL LP S+ K++N G++
Sbjct:  181 PAELSRRRAVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAVWAIYVWCRRTDDIVDGPRAMVRGKKSMQKDLTDWATRLENVWEGKPKDALDLALVDVRENYPSLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDLEKFGVDPENIMNGILDSNYKELMRYQIARARFYYKQAARGIPMLSPEGRLPVQASLDMYGKILTAIEGNNYDNFRKRAYISKTEKLLTLPFSYAKSLNPGQI 486

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ35997.1 (phytoene synthetase [Dictyopteris undulata])

HSP 1 Score: 402.5 bits (1033), Expect = 2.300e-108
Identity = 192/309 (62.14%), Postives = 242/309 (78.32%), Query Frame = 0

Query:  290 VEVPGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            V  P ++++   +L +AY+EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + +M  +L  W  RL+D+W  +P DALD  L DVR  YPS+ I P+KDMI GMVMDVPG+G++RY TF+EL LYCYRVAGTVGLMTLPI+ TA G + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLEDL RFGV  + IMN I++SNY+ ++KFQI+RAR Y+ +A+ GI ML+ ++RLPV++SLDMY +IL  IE NDYDNFR RAY SK EKLL LP SW +++N GK+
Sbjct:  104 VRGPAESQRRTIVLNQAYAECERITGIFAKTFYLGTKFMSPVGRKAIWAIYVWCRRTDDIVDGPRAMVRGKKSMQQELADWTVRLEDVWRGKPRDALDLALVDVRESYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFKELELYCYRVAGTVGLMTLPILKTAEGVSQEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDLERFGVDPENIMNGILDSNYKALMKFQISRARFYYKQAQRGIPMLAAESRLPVQASLDMYSKILRAIETNDYDNFRKRAYTSKTEKLLTLPLSWWRSVNVGKV 412

[Close]

BLAST of NO20G01840 vs. NCBI_GenBank
Match: ATQ35996.1 (phytoene synthetase [Undaria pinnatifida])

HSP 1 Score: 401.4 bits (1030), Expect = 5.000e-108
Identity = 191/306 (62.42%), Postives = 243/306 (79.41%), Query Frame = 0

Query:  293 PGDAEQHKALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIVDSPRAIV--ENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSIEPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVTEDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKL 597
            P + ++ + +L +AY EC+RIT I+AKTFY+GT F+    R A W+IYVWCRRTDDIVD PRA+V  + +M  DL+ W  RLDD++  +P D+LD  L DVR  YPS+ I P+KDMI GMVMDVPG+G++RY TFEEL LYCYRVAGTVGLM LPI+GTA G + + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLEDL +FGV  + IMN I++SNY+E++++QIARAR Y+ +A  GI MLSP+ RLPV++SLDMY +IL  IE N++DNFR RAY+SK EKLL LP S++K++N GK+
Sbjct:  133 PAENQRRRMVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAVWAIYVWCRRTDDIVDGPRAMVRGKKSMQQDLKDWAVRLDDVFKGKPRDSLDLALVDVRENYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDLEKFGVDPENIMNGILDSNYKELMRYQIARARFYYKQAARGIPMLSPEGRLPVQASLDMYGKILTAIESNNFDNFRKRAYISKTEKLLTLPFSYLKSLNPGKV 438

The following BLAST results are available for this feature:

BLAST of NO20G01840 vs. NCBI_GenBank

BLAST of NO20G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM22037.1	6.200e-191	76.49	phytoene synthase [Nannochloropsis gaditana]	[more]
ATQ36000.1	6.400e-111	62.42	phytoene synthetase [Sargassum vachellianum]	[more]
ATQ36001.1	6.400e-111	62.42	phytoene synthetase [Sargassum henslowianum]	[more]
ATQ36002.1	1.100e-110	62.42	phytoene synthetase [Sargassum hemiphyllum var. ch...	[more]
ATQ35998.1	1.800e-110	62.09	phytoene synthetase [Sargassum thunbergii] >ATQ359...	[more]
ATQ35992.1	9.200e-110	62.09	phytoene synthetase [Ishige okamurae]	[more]
ATQ35994.1	1.300e-108	62.75	phytoene synthetase [Punctaria latifolia]	[more]
CBJ31337.1	2.300e-108	62.42	Phytoene synthase; chloroplast precursor [Ectocarp...	[more]
ATQ35997.1	2.300e-108	62.14	phytoene synthetase [Dictyopteris undulata]	[more]
ATQ35996.1	5.000e-108	62.42	phytoene synthetase [Undaria pinnatifida]	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL021	nonsL021	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR020	ncniR020	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR067	ngnoR067	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002724	NSK002724	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO20G01840.1	NO20G01840.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594898	gene_6402	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
PSY	gene8384	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO20G01840.1	NO20G01840.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO20G01840 ID=NO20G01840|Name=NO20G01840|organism=Nannochloropsis oceanica|type=gene|length=1797bp
ATGCAGGAGCGACAGCAGCACCATCAGCGTGGAGGAGCGGGATTGAGAGG
CCACTGTGGGGATGATTTGGTGAGCTGTCCAAAGCGGAGGAGATGTCGGA
CAGCAACAGCGTGGACAGCAGCGGCGGGATCAGCAGCACCAGCAGCAGCG
GTACCCATCACCTTTTTCAGCAGCACGACGAGAAGAAGAAAGGGAGACGG
CGGGGAGCAGCAGCCACATCAAGAGGTTCAGGACAGGATTCAGAACAGGA
CGGTTGTTCGAAAGATGGGCGGCCGCAGAGCTATGGGCGCATCAGTGTGG
ATAGGCTTGTGCGTGGCGGCAGCGCTTGTCCTCTTGGTCGCTTCATCTGC
TACTGCCTTCGTCACGAGCCCAGTACCACGCGGCCCAGCAAGCAGCAGCA
GGTATAGCGGGGAAGTGGGACGGCGGTATGTGGCTTCCAAGATTAGCTCG
GGCAGTGGTGTCATGAGCAGCCCCAAGCCCAGCGGCAGCAGCAGCAGCAG
CCCTGGCAGTTCCACCGGCAACAGCAATAGCAATAACAACAACCACCATC
ACGCCGCCCAGGGAATGCATCCGCATTCGGCCACCGGCTCCCCCTCCACA
CTCCAGCCATCAAAGAGCTTGCTGGCGGGCAGTGCCTTGGGTGGGGTCCA
GGCTGCTGTCGACACAAGTCGGAGCAAGAACACCGTTACCCGTGCTGTAG
CTACCACGGCCAGCTCCGGCGGATACGTCCCCAAGCAGATGGCGCCCCAG
CAGCCCATGGCTACCTCCCAGTCTCCGCCTGTCGTTGTGAATACACCTAA
TGTCATACCCCCCTCTATACTTTGGGGGGAGGGCGGGCACATCGCCAGCT
CGGGGGTCACGGGCGGGGTGGAGGTGCCGGGGGACGCCGAGCAGCACAAG
GCGCTCCTGACTGAGGCCTACTCAGAGTGCCAGCGCATCACCTCCATCTA
CGCCAAGACCTTCTACATGGGCACCTCATTCCTGGACTATGCAAAGAGGT
CGGCCACGTGGTCCATCTACGTCTGGTGCCGGCGGACGGACGATATTGTG
GACTCGCCGCGCGCCATCGTGGAGAACACCATGGACGCCGACCTGGAGAC
GTGGAACCAGCGTCTGGATGATATCTGGGCGAATCGACCTTGGGACGCAC
TGGATGCCACGCTCTGCGACGTGCGGGCGCGATATCCGAGTATGAGCATC
GAGCCGTACAAGGATATGATAAAGGGCATGGTCATGGACGTGCCCGGCCT
AGGGCAGCACCGGTACGCCACCTTCGAGGAGCTCTACCTGTACTGCTATC
GCGTCGCCGGCACGGTGGGGCTTATGACGCTACCCATCATGGGCACGGCT
CCAGGGTTTACTGTTAAGCAGGCCACGGAGCCGGCTTTGGCCCTCGGTAT
TGCCCTGCAGCTCACCAACATCCTTCGCGACGTAGGCGAGGACGCCATGC
GGGGCCGGATCTACCTGCCCCTGGAGGACTTGCACCGGTTTGGAGTCACA
GAGGATCAGATTATGAATAAGATCATGAACTCCAATTACCGTGAGATGAT
CAAGTTCCAGATTGCCAGGGCTCGCGTCTACTTCGACCGAGCGGAGGAAG
GGATCATGATGCTTTCCCCCGACGCGCGATTACCGGTGCGGTCGTCTCTG
GACATGTACCGGGAGATTCTGAATCGGATCGAGGACAACGACTACGACAA
TTTCAGGCATCGAGCTTATGTGTCCAAGTTTGAAAAGCTCTTGATTTTGC
CGACGTCGTGGATGAAGACCATGAACTTTGGAAAGTTGTTTGATTGA

protein sequence of NO20G01840.1

>NO20G01840.1-protein ID=NO20G01840.1-protein|Name=NO20G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=599bp
MQERQQHHQRGGAGLRGHCGDDLVSCPKRRRCRTATAWTAAAGSAAPAAA
VPITFFSSTTRRRKGDGGEQQPHQEVQDRIQNRTVVRKMGGRRAMGASVW
IGLCVAAALVLLVASSATAFVTSPVPRGPASSSRYSGEVGRRYVASKISS
GSGVMSSPKPSGSSSSSPGSSTGNSNSNNNNHHHAAQGMHPHSATGSPST
LQPSKSLLAGSALGGVQAAVDTSRSKNTVTRAVATTASSGGYVPKQMAPQ
QPMATSQSPPVVVNTPNVIPPSILWGEGGHIASSGVTGGVEVPGDAEQHK
ALLTEAYSECQRITSIYAKTFYMGTSFLDYAKRSATWSIYVWCRRTDDIV
DSPRAIVENTMDADLETWNQRLDDIWANRPWDALDATLCDVRARYPSMSI
EPYKDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTA
PGFTVKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLHRFGVT
EDQIMNKIMNSNYREMIKFQIARARVYFDRAEEGIMMLSPDARLPVRSSL
DMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPTSWMKTMNFGKLFD*

Synonyms

Publications