NO20G01780, NO20G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01780 vs. NCBI_GenBank
Match: EWM22056.1 (metal dependent phosphohydrolase [Nannochloropsis gaditana]) HSP 1 Score: 263.8 bits (673), Expect = 5.400e-67 Identity = 146/261 (55.94%), Postives = 172/261 (65.90%), Query Frame = 0 Query: 3 PSTPPSASPAVAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGLTGEELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACE----QGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEEVWGER 260 P++ + SP V AAL +V+QHCKGVDASHD+ HI RVLAL DRIARA+GL EL+ WLCA LHD+GD KY +G VL L+ L A G+IT Q +RI AVV RVSFREEL GG++ P DLLTYPELGPVKDADQLDAIGA+GIARTFAFGGA GR Y E+ A+ G + R LP SK Y +S+A Q K A RMKT EG LAK+RHAFME F+A+FVEE+ G+R Sbjct: 4 PASFHTHSP-VKAALVHVKQHCKGVDASHDICHIERVLALTDRIARAQGLNSCELEMAWLCAVLHDVGDPKYTSNGVKVLNGVLDQLQADGHITPGQAQRIQAVVLRVSFREELPGGMFTPGDLLTYPELGPVKDADQLDAIGAIGIARTFAFGGALGREMYSSEMAASH-------GAGLENRRRPLPASKIEYLASSAVSVENGQTTTKGXXXXXXXXXXXXXXAARMKTSEGRALAKARHAFMESFVAEFVEEITGKR 256
BLAST of NO20G01780 vs. NCBI_GenBank
Match: KFK43929.1 (hypothetical protein AALP_AA1G192600 [Arabis alpina]) HSP 1 Score: 148.3 bits (373), Expect = 3.300e-32 Identity = 98/238 (41.18%), Postives = 137/238 (57.56%), Query Frame = 0 Query: 20 VEQHCKGVDASHDLSHIHRVLALADRIARAEGLT--GEELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAG-GLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 VE+ KG D+SHD SH+ RV LA IAR EGL+ E ++ V L A LHDIGD KY++D ++ + +E+ + I + +I A++ + F++ELAG GL + + PE G V+DAD+LDAIGA+GIAR F FGG+R R +D E+ K R E+T K+ Y K++ + HF EKLL + K MKT G +A+ +H FMEEFL +F EE Sbjct: 14 VEKAMKGNDSSHDASHVWRVRDLALSIARDEGLSSNSESMEIVELAALLHDIGDYKYIRDPSEA--RLVENFLDEEGIEETKKMKILAIINGMGFKDELAGLGLCE-----SLPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEI----KPRTELT--------------KKQYI--------KKEEQTTINHFHEKLLKMKKLMKTEAGKRMAEKKHKFMEEFLQEFYEE 218
BLAST of NO20G01780 vs. NCBI_GenBank
Match: XP_024008470.1 (uncharacterized protein LOC18993162 isoform X2 [Eutrema salsugineum] >XP_024008471.1 uncharacterized protein LOC18993162 isoform X2 [Eutrema salsugineum] >ESQ35071.1 hypothetical protein EUTSA_v10008690mg [Eutrema salsugineum]) HSP 1 Score: 144.1 bits (362), Expect = 6.300e-31 Identity = 97/242 (40.08%), Postives = 133/242 (54.96%), Query Frame = 0 Query: 20 VEQHCKGVDASHDLSHIHRVLALADRIARAEGLT--GEELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEEVWGER 260 VE+ KG DASHD SH+ RV LA IAR EGL+ + ++ V L A LHDIGD KY++D + + +E+ + + + +I ++ + F++EL+G + PE G V+DAD+LDAIGA+GIAR F FGG+R R +D E+ K R E+T KE Y K++ + HF EKLL L K MKT G A+ RH FM+EFL +F EE W R Sbjct: 18 VEKTMKGNDASHDASHVWRVRDLALSIAREEGLSSNSDSMEIVELAALLHDIGDYKYIRDPLEA--KLVENFLDEEGVEETKKMKILKIINGMGFKDELSGQAL----CESLPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEI----KPRTELT--------------KEQYM--------KKEEQTTINHFHEKLLKLKKLMKTEAGKRRAEKRHNFMQEFLTEFYEE-WDGR 226
BLAST of NO20G01780 vs. NCBI_GenBank
Match: XP_006416718.2 (uncharacterized protein LOC18993162 isoform X1 [Eutrema salsugineum]) HSP 1 Score: 144.1 bits (362), Expect = 6.300e-31 Identity = 97/242 (40.08%), Postives = 133/242 (54.96%), Query Frame = 0 Query: 20 VEQHCKGVDASHDLSHIHRVLALADRIARAEGLT--GEELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEEVWGER 260 VE+ KG DASHD SH+ RV LA IAR EGL+ + ++ V L A LHDIGD KY++D + + +E+ + + + +I ++ + F++EL+G + PE G V+DAD+LDAIGA+GIAR F FGG+R R +D E+ K R E+T KE Y K++ + HF EKLL L K MKT G A+ RH FM+EFL +F EE W R Sbjct: 73 VEKTMKGNDASHDASHVWRVRDLALSIAREEGLSSNSDSMEIVELAALLHDIGDYKYIRDPLEA--KLVENFLDEEGVEETKKMKILKIINGMGFKDELSGQAL----CESLPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEI----KPRTELT--------------KEQYM--------KKEEQTTINHFHEKLLKLKKLMKTEAGKRRAEKRHNFMQEFLTEFYEE-WDGR 281
BLAST of NO20G01780 vs. NCBI_GenBank
Match: NP_173176.1 (Metal-dependent phosphohydrolase [Arabidopsis thaliana] >AAO00736.1 unknown protein [Arabidopsis thaliana] >AAP80172.1 At1g17330 [Arabidopsis thaliana] >AEE29573.1 Metal-dependent phosphohydrolase [Arabidopsis thaliana]) HSP 1 Score: 143.7 bits (361), Expect = 8.200e-31 Identity = 100/248 (40.32%), Postives = 137/248 (55.24%), Query Frame = 0 Query: 9 ASPAVAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGLT--GEELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 A+ + A VE+ KG DASHD H+ RV LA IAR EGL+ + ++ V L A LHDIGD KY++D ++ ++ +E+ + I + +I ++ + F++ELA G+ E L PE G V+DAD+LDAIGA+GIAR F FGG+R R +D E+ K R E+T KE Y K + + HF EKLL L K MKT G A+ RH FMEE+L +F EE Sbjct: 2 AAKTMRKAEELVEKAMKGNDASHDAWHVWRVRDLALSIAREEGLSSNSDSMEIVELAALLHDIGDYKYIRDPSE--EKLVENFLDDEGIEETKKTKILTIINGMGFKDELA-GVALCESL---PEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEI----KPRTELT--------------KEQYI--------KREEQTTINHFHEKLLKLKKLMKTEAGKRRAEKRHKFMEEYLKEFYEE 217
BLAST of NO20G01780 vs. NCBI_GenBank
Match: XP_006437582.1 (uncharacterized protein LOC18044806 [Citrus clementina] >XP_006484537.1 PREDICTED: uncharacterized protein YpgQ [Citrus sinensis] >ESR50822.1 hypothetical protein CICLE_v10032700mg [Citrus clementina] >GAY46888.1 hypothetical protein CUMW_100420 [Citrus unshiu]) HSP 1 Score: 142.5 bits (358), Expect = 1.800e-30 Identity = 99/244 (40.57%), Postives = 135/244 (55.33%), Query Frame = 0 Query: 13 VAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGLTG--EELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 V A VE+ KG DASHD SH+ RV LA +AR EGL + ++ V L A LHDIGD KY++D ++ ++ +E+ + + + RI ++ ++ F++E+A GL E PE G V+DAD+LDAIGA+GIAR F FGG+R R +D A K R++V SKE Y K++ + HF EKLL L MKT G A+ RH FMEEFL +F EE Sbjct: 5 VRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSE--EKIVENFLEDEGLEESKKMRILNIIKKMGFKDEIA-GLANAE---FSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHD----PAIKPRSDV--------------SKEQYM--------KKEEQTTVNHFHEKLLKLKDLMKTEAGRRRAEKRHKFMEEFLMEFYEE 216
BLAST of NO20G01780 vs. NCBI_GenBank
Match: KDO52745.1 (hypothetical protein CISIN_1g027623mg [Citrus sinensis]) HSP 1 Score: 142.5 bits (358), Expect = 1.800e-30 Identity = 99/244 (40.57%), Postives = 135/244 (55.33%), Query Frame = 0 Query: 13 VAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGLTG--EELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 V A VE+ KG DASHD SH+ RV LA +AR EGL + ++ V L A LHDIGD KY++D ++ ++ +E+ + + + RI ++ ++ F++E+A GL E PE G V+DAD+LDAIGA+GIAR F FGG+R R +D A K R++V SKE Y K++ + HF EKLL L MKT G A+ RH FMEEFL +F EE Sbjct: 5 VRKAEKLVERSMKGNDASHDASHVWRVRDLALSLAREEGLASNPDSMEIVELAALLHDIGDYKYLRDPSE--EKIVENFLEDEGLEESKKMRILNIIKKMGFKDEIA-GLANAE---FSPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHD----PAIKPRSDV--------------SKEQYM--------KKEEQTTVNHFHEKLLKLKDLMKTEAGQRRAEKRHKFMEEFLMEFYEE 216
BLAST of NO20G01780 vs. NCBI_GenBank
Match: XP_001700649.1 (predicted protein [Chlamydomonas reinhardtii] >PNW83535.1 hypothetical protein CHLRE_05g234647v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 142.1 bits (357), Expect = 2.400e-30 Identity = 102/250 (40.80%), Postives = 135/250 (54.00%), Query Frame = 0 Query: 10 SPA-VAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGLTGEELQTVWLCATLHDIGDAKYV-QDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGG---LYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 SPA VAAA AYV + DASHD +HI RV A A +A+ EGL+ + V L A LHD+ D KY DGA +A++ +A + +R+ +++RV F+EELA G P + E V+DAD+LDAIGA+GIAR F FGGA+ R +D EV ++ SKE Y + G EK+ + HF EKLL L MKT G +A+ RHAFME +L QF +E Sbjct: 8 SPAVVAAAEAYVRKELAATDASHDFAHIQRVRANARNLAQLEGLSADATCLVDLAALLHDVRDWKYSGSDGATA--EAVQAFLADQGVAPDTAQRVLYIISRVGFKEELAAGGAAEAPPVAVDLAQEAAIVQDADRLDAIGAIGIARCFTFGGAKHRVLHDPEVPPRDQ------------------LSKEQYMT------GGEKS-TTINHFYEKLLKLKGLMKTPAGRRIAEQRHAFMESYLTQFHDE 230
BLAST of NO20G01780 vs. NCBI_GenBank
Match: XP_010532328.1 (PREDICTED: uncharacterized protein LOC104808350 [Tarenaya hassleriana]) HSP 1 Score: 142.1 bits (357), Expect = 2.400e-30 Identity = 95/244 (38.93%), Postives = 132/244 (54.10%), Query Frame = 0 Query: 13 VAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGLTG--EELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 V A VE+ KG DASHD SH+ RV +LA +AR EGL+ + ++ V L A LHDIGD KY +D ++ ++ +E+ + + + +I ++ + F++ELAG + + PE G V+DAD+LDAIGA+GIAR F FGG+R R +D E+ K R E+T + + EQ + HF EKLL L MKT G AK RH FM EFL +F EE Sbjct: 4 VKKAEEMVERVMKGNDASHDASHVWRVRSLALSLARDEGLSANPDSMEIVELAALLHDIGDYKYRRDPSE--EKLVENFLNEECVEEGKKMKILKIIEGMGFKDELAGS----STVESLPEFGVVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEI----KPRMELTKDQYMKKEEQ----------------------TTVNHFHEKLLKLKDLMKTEAGRRRAKKRHEFMVEFLKEFYEE 215
BLAST of NO20G01780 vs. NCBI_GenBank
Match: XP_002890219.1 (uncharacterized protein LOC9329008 [Arabidopsis lyrata subsp. lyrata] >EFH66478.1 hypothetical protein ARALYDRAFT_471936 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 141.7 bits (356), Expect = 3.100e-30 Identity = 101/248 (40.73%), Postives = 137/248 (55.24%), Query Frame = 0 Query: 9 ASPAVAAALAYVEQHCKGVDASHDLSHIHRVLALADRIARAEGL--TGEELQTVWLCATLHDIGDAKYVQDGADVLKQALEHLVAGGYITIKQTERIHAVVARVSFREELAGGLYKPEDLLTYPELGPVKDADQLDAIGALGIARTFAFGGARGRAFYDMEVLAAEKKRAEVTGNSISGRTEQLPTSKEAYTSSAACEQGKEKAGDALTHFGEKLLHLAKRMKTREGHVLAKSRHAFMEEFLAQFVEE 255 A+ + A VE+ KG DASHD H+ RV LA IAR EGL + + ++ V L A LHDIGD KY++D ++ ++ +E + I + +I ++ + F++ELA GL E L PE G V+DAD+LDAIGA+GIAR F FGG+R R +D E+ K R E+T KE Y K++ + HF EKLL L K MKT G A+ RH FMEE+L +F EE Sbjct: 2 AAKTMRKAEELVEKAMKGNDASHDDWHVWRVRDLALSIAREEGLSSSSDSMEIVELAALLHDIGDYKYLRDPSE--EKLVETFLDEEGIEETKKTKILTIINGMGFKDELA-GLALCESL---PEFGIVQDADRLDAIGAIGIARCFTFGGSRNRVLHDPEI----KPRTELT--------------KEQYI--------KKEEQTTINHFHEKLLKLKKLMKTEAGRRRAEKRHKFMEEYLKEFYEE 217 The following BLAST results are available for this feature:
BLAST of NO20G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01780 ID=NO20G01780|Name=NO20G01780|organism=Nannochloropsis oceanica|type=gene|length=780bpback to top protein sequence of NO20G01780.1 >NO20G01780.1-protein ID=NO20G01780.1-protein|Name=NO20G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
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