NO20G01750, NO20G01750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01750 vs. NCBI_GenBank
Match: EWM22049.1 (Uncharacterized protein family UPF0153 [Nannochloropsis gaditana]) HSP 1 Score: 314.3 bits (804), Expect = 4.400e-82 Identity = 175/318 (55.03%), Postives = 196/318 (61.64%), Query Frame = 0 Query: 15 SVVESFLLPFRPASPSTLPSL-----QLHQLDGARQLPLSRPIQHLHATES---LEGNAEAGESVDPAASSAPAVPKPFVSRRVRRGPIGAAASLSNKXXXXXXXXXXXXXXXXXXXXXXXXXXAPFIPSSTPMVLKLSNKWACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAIKHLKGANTAPDXXXXXXXXXXFGKAAQVKALHEAAAAFVKPVVPIDPFTGEESTKVAVKADWINT 325 + V SF L FRP S + P+L Q +G R+ P P T S E A + + VD A+ P PKPF+SRRVRRGPIGAA S P+STP VLK+S KWACVANCGACCYLAPSERPYL+DYFDDP DLA YNSM GDDGWC+HYDK ARACTVFEDRPWFCRVEG+TF KMYGVT EMDKFCTSCCREQIADVYGT S EM +FN+AIKHLK A+ FGK A +A+ EA V P+VPIDPFT E S K A ADWI + Sbjct: 16 AAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRR-PFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPK-PKPFISRRVRRGPIGAATS----------GIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLK-ASAGDARSERSKGAGGFGKGA--RAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS 318
BLAST of NO20G01750 vs. NCBI_GenBank
Match: CBN74606.1 (Fe-S-cluster oxidoreductase-like [Ectocarpus siliculosus]) HSP 1 Score: 188.3 bits (477), Expect = 3.700e-44 Identity = 82/132 (62.12%), Postives = 98/132 (74.24%), Query Frame = 0 Query: 140 MVLKLSNKWACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAIKHL-KGANTAPD 271 ++LK S++WACV NCGACCYLAP ERP L +Y DP++ LY SMTG DGWC H+DK +RACTV+ DRP FCRVE ETFG MYGV P +MD FC+SCC EQI+DVYG S E+ FN A+ L +G PD Sbjct: 126 VLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDPEEFDLYMSMTGSDGWCKHFDKESRACTVYSDRPRFCRVETETFGSMYGVEPEDMDDFCSSCCNEQISDVYGAESKELRVFNEALAALERGERPKPD 257
BLAST of NO20G01750 vs. NCBI_GenBank
Match: PLS68614.1 (YkgJ family cysteine cluster protein [Cyanobacteria bacterium M5B4]) HSP 1 Score: 151.4 bits (381), Expect = 5.000e-33 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 0 Query: 147 KWACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAI 260 +W CV NCGACCYL P++RP L +YF P+++A Y ++ G+DGWC+HYD++ R CT++ DRP+FCRVE E F +YGV P E+++F CCRE I D+YGT S E F AI Sbjct: 3 QWQCVKNCGACCYLNPADRPSL-EYFLTPEEMAFYLTLVGEDGWCIHYDQSKRECTIYADRPFFCRVEAEVFLALYGVPPEELNEFAIECCREHITDMYGTDSPESQRFEAAI 114
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_008313840.1 (YkgJ family cysteine cluster protein [Leptolyngbya sp. PCC 6406]) HSP 1 Score: 150.2 bits (378), Expect = 1.100e-32 Identity = 60/113 (53.10%), Postives = 83/113 (73.45%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAIK 261 W C+ +CGACC+L PS+RP L D + P+DLA Y S+ G DGWC+H+D R C ++EDRPWFCRV+ +TF +YG+TP ++D+F +CC+ QIA+VYG S EM F +AI+ Sbjct: 4 WHCIQSCGACCHLDPSDRPDL-DQYLSPEDLAHYLSLVGADGWCIHFDADQRRCGIYEDRPWFCRVQADTFNALYGITPADLDEFAIACCQTQIAEVYGEGSDEMERFEVAIE 115
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_035985722.1 (YkgJ family cysteine cluster protein [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 147.9 bits (372), Expect = 5.500e-32 Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAI 260 W CV CGACC+LAP ERP L Y DPD LALY SM G+DGWC+HY+K R C ++ +RP FCRV TF M+GVT ++D F CC+E IAD+YG S EM FN A+ Sbjct: 4 WQCVKTCGACCFLAPDERPDLESYL-DPDQLALYLSMVGEDGWCIHYNKGDRLCAIYPERPTFCRVTFSTFETMFGVTADQLDDFAIDCCQEHIADIYGDESPEMERFNRAV 114
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_099534497.1 (YkgJ family cysteine cluster protein [Limnothrix sp. PR1529]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 59/112 (52.68%), Postives = 81/112 (72.32%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAI 260 W C+ CGACC+L P+ERP L Y +P+DL LY SM G DGWC++YD+ R CT+++DRPWFCRV+ ETF +M+ + P E++ F CCR+QI+ VYG +S EM F+ A+ Sbjct: 4 WQCIKGCGACCHLDPNERPDLESYL-EPEDLLLYLSMVGPDGWCMNYDQLNRECTIYDDRPWFCRVQVETFQRMFEIEPAELNDFAIECCRDQISGVYGDLSLEMHRFDRAV 114
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_073606725.1 (YkgJ family cysteine cluster protein [Phormidium tenue] >OKH50912.1 Fe-S cluster protein [Phormidium tenue NIES-30]) HSP 1 Score: 146.4 bits (368), Expect = 1.600e-31 Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAI 260 W CV +CGACC+LAP ERP L Y +PD LALY SM G+DGWC+HYD R CT++ DRP FC+V TF M+GV E+D F CC+E IAD+YG S EM FN A+ Sbjct: 4 WQCVKSCGACCFLAPDERPDLDSYL-EPDQLALYLSMVGEDGWCIHYDAGDRLCTIYADRPSFCQVTFSTFETMFGVEADELDDFAIDCCQEHIADIYGEASPEMERFNGAV 114
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_106903746.1 (YkgJ family cysteine cluster protein, partial [filamentous cyanobacterium CCT1] >PSN11149.1 YkgJ family cysteine cluster protein, partial [filamentous cyanobacterium CCT1]) HSP 1 Score: 146.0 bits (367), Expect = 2.100e-31 Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAI 260 W CV +CGACC+LAP ERP L Y D D LALY S+ G+DGWC+HYDK R CT++ DRP FCRV TF M+GV E+D F CC+E IAD+YG S EM F+ A+ Sbjct: 4 WQCVKSCGACCFLAPDERPDLESYLDS-DQLALYLSLVGNDGWCIHYDKGDRTCTIYPDRPDFCRVTFSTFETMFGVASDELDDFAIDCCQEHIADIYGDESPEMERFDRAV 114
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_009342524.1 (MULTISPECIES: YkgJ family cysteine cluster protein [Aphanizomenonaceae] >EFA73512.1 Protein of unknown function UPF0153 [Raphidiopsis brookii D9] >OHY33482.1 Fe-S cluster protein [Cylindrospermopsis raciborskii MVCC14] >OPH11357.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii CENA302] >OSO97421.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii CENA303]) HSP 1 Score: 145.6 bits (366), Expect = 2.700e-31 Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFNLAIKHLKG 265 W CV CGACC+L PS+RPYL DY P +L+LY + G+DGWCV++D+ R CT++ DRP FCRVE +TF KMYG+ P E++ F CC +QI VYG S EM F KH+ G Sbjct: 4 WQCVKQCGACCHLDPSDRPYLSDYL-SPTELSLYLRLVGEDGWCVNFDRQTRECTIYRDRPSFCRVESKTFEKMYGIKPEELNDFAIDCCHQQIDSVYGDRSLEMIRF----KHILG 115
BLAST of NO20G01750 vs. NCBI_GenBank
Match: WP_006277898.1 (MULTISPECIES: YkgJ family cysteine cluster protein [Cylindrospermopsis] >EFA69285.1 protein of unknown function UPF0153 [Cylindrospermopsis raciborskii CS-505] >KRH98411.1 Fe-S cluster protein [Cylindrospermopsis sp. CR12] >OBU76210.1 Fe-S cluster protein [Cylindrospermopsis raciborskii CS-505] >OHY33544.1 Fe-S cluster protein [Cylindrospermopsis raciborskii CS-508] >PNJ96587.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii C03] >PNJ97555.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii C07] >PNJ97618.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii C04] >PNK05391.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii S14] >PNK08686.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii S10] >PNK10537.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii S07] >PNK15813.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii S06] >PNK19748.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii S01] >PNK20287.1 zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii S05]) HSP 1 Score: 145.2 bits (365), Expect = 3.600e-31 Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 0 Query: 148 WACVANCGACCYLAPSERPYLMDYFDDPDDLALYNSMTGDDGWCVHYDKTARACTVFEDRPWFCRVEGETFGKMYGVTPPEMDKFCTSCCREQIADVYGTVSTEMTTFN 257 W CV CGACC+L PS+RPYL DY P +L+LY + G+DGWCV++D R CT++ DRP FCRVE +TF KMYG+ P E++ F CC +QI VYG S EM FN Sbjct: 4 WQCVKQCGACCHLDPSDRPYLSDYL-SPTELSLYLRLVGEDGWCVNFDHQTRECTIYRDRPSFCRVESKTFEKMYGIKPEELNDFAIDCCHQQIDSVYGDRSLEMIRFN 111 The following BLAST results are available for this feature:
BLAST of NO20G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01750 ID=NO20G01750|Name=NO20G01750|organism=Nannochloropsis oceanica|type=gene|length=1369bpback to top protein sequence of NO20G01750.1 >NO20G01750.1-protein ID=NO20G01750.1-protein|Name=NO20G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
|