NO20G01740, NO20G01740 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G01740
Unique Name	NO20G01740
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1735
Alignment location	chr20:527199..528933 -

Link to JBrowse

Properties


Property Name	Value
Description	Rio kinase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:527199..528933 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation
GO:0006464	cellular protein modification process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004674	protein serine/threonine kinase activity
GO:0005524	ATP binding
GO:0016301	kinase activity
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom
IPR036390	WH_DNA-bd_sf
IPR015285	RIO2_wHTH_N
IPR000687	RIO_kinase

Homology

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: EWM22057.1 (rio kinase [Nannochloropsis gaditana])

HSP 1 Score: 541.6 bits (1394), Expect = 2.200e-150
Identity = 260/296 (87.84%), Postives = 280/296 (94.59%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMHYVPEDCEIPKFEDILAEA 297
            MKLDVTCMRY+SKDD+RVLTAVEMGMKNHDVVPVEL++ IAKLRHGG QKFL+TLLRFKL+Y+DKTTYDGYRLT+GGYDILALKT  ARGHISGVGQKVGVGKESDIYVAQTE G+EVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALRE+AFMKALH+NGFPTP PIDQNRHVVLMSRV+GFPMFQVKQGNMAEPE++FPVC+DLIVRMARRGLVHCDFNEFNLM+DE G VTLIDFPQMISTSH NA+EMFERDV  VVKFFAMKMHYVP + E+P FE +L EA
Sbjct:    1 MKLDVTCMRYMSKDDFRVLTAVEMGMKNHDVVPVELLIKIAKLRHGGVQKFLSTLLRFKLVYHDKTTYDGYRLTFGGYDILALKTLLARGHISGVGQKVGVGKESDIYVAQTEEGEEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREYAFMKALHSNGFPTPTPIDQNRHVVLMSRVKGFPMFQVKQGNMAEPERIFPVCMDLIVRMARRGLVHCDFNEFNLMVDEAGAVTLIDFPQMISTSHANAREMFERDVQCVVKFFAMKMHYVPGEDEVPDFEMVLREA 296

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: CBN77739.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 429.1 bits (1102), Expect = 1.600e-116
Identity = 200/296 (67.57%), Postives = 245/296 (82.77%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMHYVPEDCEIPKFEDILAEA 297
            +KLDVTCMR+LSK D RVLTAVEMGMKNHD+VPVELI +IAKLRHGG  + L+TLL FKLI +D+++YDGYRLTY GYDILAL    ARGHI  VG K+G+GKE+DIY+AQT  GD+V+LK HRLGR SF+AVKNKRDYL+ R S SWLYMSRL+AL+EFAFM AL  +GFPTP P+D NRHVVLMS  +G+PM+Q++ G M  P+ V+  C+++IVR+AR GL+HCDFNEFNL++DE  R+TLIDFPQM+ST H+NA EMF+RDV+ VVKFF+MKM +VPE  +IP F D +  A
Sbjct:    2 VKLDVTCMRHLSKHDIRVLTAVEMGMKNHDLVPVELISSIAKLRHGGTHRILSTLLTFKLIAHDRSSYDGYRLTYSGYDILALNVLQARGHICAVGSKIGMGKEADIYMAQTPDGDQVVLKLHRLGRTSFKAVKNKRDYLKSRTSVSWLYMSRLSALKEFAFMTALFQHGFPTPTPLDHNRHVVLMSHAKGYPMYQLRSGEMGHPDVVYRQCVEMIVRLARHGLIHCDFNEFNLLVDEEERLTLIDFPQMVSTRHVNAGEMFDRDVACVVKFFSMKMKHVPEPSDIPSFADAVGGA 297

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: OQR81317.1 (RIO kinase [Thraustotheca clavata])

HSP 1 Score: 389.8 bits (1000), Expect = 1.100e-104
Identity = 184/299 (61.54%), Postives = 241/299 (80.60%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VL AVEMGMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+HRK  +W Y+S+L+A++E AF+KAL+  GFPTP PID NRH ++MS V+G+P+ QV++  MA+ +  +  C+D++VR+A  GLVHCDFNEFN+MI++ G++T+IDFPQMISTSH NA+E+F RDV G+VKF++   H  Y+P+  E+PK  DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLNAVEMGMKNHEIVPVELISSIAKLRHGGVSKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKHRKQVNWFYLSKLSAMKENAFLKALYERGFPTPTPIDANRHAIVMSLVDGYPLNQVRR--MADSKGAYDACMDIVVRLAECGLVHCDFNEFNIMINDEGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFYSRLQHGSYIPD--EVPKLGDIVRDAE 295

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_012210287.1 (atypical/RIO/RIO2 protein kinase [Saprolegnia parasitica CBS 223.65] >KDO19000.1 atypical/RIO/RIO2 protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 386.7 bits (992), Expect = 9.300e-104
Identity = 183/299 (61.20%), Postives = 241/299 (80.60%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VLTAVE+GMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+ +K  +W Y+S+L+A++E AF++AL+  GFPTP PID NRH ++MS V+GFP+ QV++  MA  +  +  C+D++VR+A  GLVHCDFNEFN+M+++ G++T+IDFPQMISTSH NA+E+F RDV G+VKFF+   H  YVP+  E+PK +DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLTAVELGMKNHEIVPVELISSIAKLRHGGVNKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKTKKQVNWFYLSKLSAMKENAFLRALYERGFPTPTPIDANRHAIVMSLVDGFPLNQVRR--MANSKDAYDNCMDIVVRLAECGLVHCDFNEFNIMMNDAGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFFSRLQHGSYVPD--EVPKLQDIVRDAE 295

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_008614246.1 (Atypical/RIO/RIO2 protein kinase [Saprolegnia diclina VS20] >EQC32305.1 Atypical/RIO/RIO2 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 386.0 bits (990), Expect = 1.600e-103
Identity = 182/299 (60.87%), Postives = 243/299 (81.27%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VLTAVE+GMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+ +K  +W Y+S+L+A++E AF++AL+  GFPTP PID NRH ++MS V+GFP+ QV++  MA+ ++ +  C+D++VR+A  GLVHCDFNEFN+M+++ G++T+IDFPQMISTSH NA+E+F RDV G+VKFF+   H  YVP+  E+P+ +DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLTAVELGMKNHEIVPVELISSIAKLRHGGVSKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKTKKQVNWFYLSKLSAMKENAFLRALYERGFPTPTPIDANRHAIVMSLVDGFPLNQVRR--MADSKEAYDNCMDIVVRLAECGLVHCDFNEFNIMMNDTGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFFSRLQHGSYVPD--EVPQLQDIVRDAE 295

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: OQR85602.1 (RIO kinase [Achlya hypogyna])

HSP 1 Score: 385.6 bits (989), Expect = 2.100e-103
Identity = 181/299 (60.54%), Postives = 240/299 (80.27%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VLTAVE+GMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+ +K  +W Y+S+L+A++E AF++AL+  GFPTP PID NRH ++MS V+G+P+ QV++  M + +  +  C+D++VR+A  GLVHCDFNEFN+MI++ G++T+IDFPQMISTSH NA+E+F RDV G+VKFF+   H  Y+P+  E+PK  DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLTAVELGMKNHEIVPVELISSIAKLRHGGVNKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKTKKQVNWFYLSKLSAMKENAFLRALYERGFPTPTPIDANRHAIVMSLVDGYPLNQVRR--MTDSKDAYDACMDIVVRLAECGLVHCDFNEFNIMINDAGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFFSRLQHGSYIPD--EVPKLADIVRDAE 295

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_009515849.1 (hypothetical protein PHYSODRAFT_260476 [Phytophthora sojae] >EGZ28574.1 hypothetical protein PHYSODRAFT_260476 [Phytophthora sojae])

HSP 1 Score: 384.8 bits (987), Expect = 3.500e-103
Identity = 197/360 (54.72%), Postives = 251/360 (69.72%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNLDEAVKASGYKASAKEEARFLEVFEAER 359
            MKLDVT MRYL+K+ +RVLTA+EMGMKNH+VVPVELI +IAKLRHGG QK L+ LLR KLI +D   YDG+RLTY GYD LAL+ F  RGHI G+G+++GVGKESDIY+A  E G EV +KFHRLGR SFRAVK+KRDYL++RKSASW YMSRL+A++E+AF+KAL+   FPTP PID NRH + MS VEG+ + QV++  +A  +  +   + ++VR+A  GLVHCDFNEFN+MI E G++T+IDFPQMISTSH NA E+F+RDV G+VKFF+      Y P+   +PK +DI+A+                                   LDE V+ASGY     E+   L +F A +
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEVVPVELIASIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGFRLTYNGYDYLALRVFLQRGHIVGLGRQIGVGKESDIYLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLKNRKSASWFYMSRLSAMKEYAFLKALYDRDFPTPTPIDCNRHAICMSLVEGYTLNQVRR--LANSKDAYDTAMSIVVRLAEYGLVHCDFNEFNIMIGEDGKITMIDFPQMISTSHPNASELFDRDVHGLVKFFSRLQAGAYTPD--RVPKLKDIVADENV-------------------------------RLDEDVEASGYGKEFGEQVHDLSIFSAHQ 325

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_002906727.1 (RIO kinase [Phytophthora infestans T30-4] >EEY66128.1 RIO kinase [Phytophthora infestans T30-4])

HSP 1 Score: 384.8 bits (987), Expect = 3.500e-103
Identity = 195/360 (54.17%), Postives = 254/360 (70.56%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNLDEAVKASGYKASAKEEARFLEVFEAER 359
            MKLDVT MRYL+++ +RVLTA+EMGMKNH+VVPVELI +IAKLRHGG QK L+ LLR KLI +D   YDGYRLTY GYD LAL+ F  RGHI+G+G+++GVGKESDIY+A  E G EV +KFHRLGR SFRAVK+KRDYL++RKSASW YMSRL+A++E+AF+KAL+   FPTP PID NRH + MS V+G+P+ QV++  +A  +  +   + ++VR+A  GLVHCDFNEFN+MI + G++T+IDFPQMISTSH NA E+F+RDV G+VKFF+      Y P+   +PK +DI+A+                                  +LDE V+ASG+     E+   L +F A +
Sbjct:    1 MKLDVTAMRYLTREHFRVLTAIEMGMKNHEVVPVELISSIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGYRLTYNGYDYLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLKNRKSASWFYMSRLSAMKEYAFLKALYDRDFPTPTPIDCNRHAICMSLVDGYPLNQVRR--LANSKDAYDTAMSIVVRLAEYGLVHCDFNEFNIMIGDDGKITMIDFPQMISTSHPNAAELFDRDVHGLVKFFSRLQGGAYTPD--RVPKLQDIVADENV-------------------------------HLDEDVEASGFGKEFGEKVHDLSIFSAHQ 325

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: GAY02271.1 (Atypical/RIO/RIO2 protein kinase [Pythium insidiosum])

HSP 1 Score: 383.3 bits (983), Expect = 1.000e-102
Identity = 183/299 (61.20%), Postives = 238/299 (79.60%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+K+ +RVLT++EMGMKNH+VVPVELI +IAKLR GG  K L+ LLR KLI +D +TYDG+RLTY GYD LAL+ F  R HI G+G+++GVGKESDI++A  E G EV +KFHRLGR SFRAVK+KRDYL++RKS SW YMSRL+A++EFAF+KALH  GFPTP PID NRH + MS V+G+P+ QV++  +A    V+   + ++VR+A  GLVHCDFNE+NLM+ + G+VT+IDFPQMISTSH NA+E+F+RDV+G+VKFF+      Y P+   +P+ EDI+A+ +
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTSIEMGMKNHEVVPVELITSIAKLRQGGINKILSHLLRNKLIAHDGSTYDGFRLTYSGYDYLALRVFLERNHIVGLGRQIGVGKESDIFLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLRNRKSVSWFYMSRLSAMKEFAFLKALHARGFPTPTPIDHNRHAICMSLVDGYPLSQVRR--LANSRDVYDEAMSILVRLAECGLVHCDFNEYNLMVSDTGKVTMIDFPQMISTSHPNARELFDRDVNGLVKFFSRLQGGAYTPD--SVPRLEDIIADGE 295

[Close]

BLAST of NO20G01740 vs. NCBI_GenBank
Match: ETK83766.1 (Atypical/RIO/RIO2 protein kinase [Phytophthora parasitica] >ETO72388.1 Atypical/RIO/RIO2 protein kinase [Phytophthora parasitica P1976] >ETP41596.1 Atypical/RIO/RIO2 protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 382.9 bits (982), Expect = 1.300e-102
Identity = 194/360 (53.89%), Postives = 252/360 (70.00%), Query Frame = 0

Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNLDEAVKASGYKASAKEEARFLEVFEAER 359
            MKLDVT MRYL+K+ +RVLTA+EMGMKNH+VVPVELI +IAKLRHGG QK L+ LLR KLI +D   YDG+RLTY GYD LAL+ F  RGHI+G+G+++GVGKESDIY+A  E G EV +KFHRLGR SFRAVK+KRDYL++RKS SW YMSRL+A++E+AF+KAL+   FPTP PID NRH + MS V+G+P+ QV++  +A  +  +   + ++VR+A  GLVHCDFNEFN+MI + G++T+IDFPQMISTSH NA E+F+RDV G+VKFF+      Y P+   +PK +DI+A+                                   LDE V+ASG+     E+   L +F A +
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEVVPVELITSIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGFRLTYNGYDYLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLKNRKSVSWFYMSRLSAMKEYAFLKALYDRDFPTPTPIDCNRHAICMSLVDGYPLNQVRR--LANSKDAYDTAMSIVVRLAEYGLVHCDFNEFNIMIGDDGKITMIDFPQMISTSHPNAAELFDRDVHGLVKFFSRLQGGAYTPD--RVPKLKDIVADENV-------------------------------RLDEDVEASGFGKEFGEKVHDLSIFSAHQ 325

The following BLAST results are available for this feature:

BLAST of NO20G01740 vs. NCBI_GenBank

BLAST of NO20G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM22057.1	2.200e-150	87.84	rio kinase [Nannochloropsis gaditana]	[more]
CBN77739.1	1.600e-116	67.57	conserved unknown protein [Ectocarpus siliculosus]	[more]
OQR81317.1	1.100e-104	61.54	RIO kinase [Thraustotheca clavata]	[more]
XP_012210287.1	9.300e-104	61.20	atypical/RIO/RIO2 protein kinase [Saprolegnia para...	[more]
XP_008614246.1	1.600e-103	60.87	Atypical/RIO/RIO2 protein kinase [Saprolegnia dicl...	[more]
OQR85602.1	2.100e-103	60.54	RIO kinase [Achlya hypogyna]	[more]
XP_009515849.1	3.500e-103	54.72	hypothetical protein PHYSODRAFT_260476 [Phytophtho...	[more]
XP_002906727.1	3.500e-103	54.17	RIO kinase [Phytophthora infestans T30-4] >EEY6612...	[more]
GAY02271.1	1.000e-102	61.20	Atypical/RIO/RIO2 protein kinase [Pythium insidios...	[more]
ETK83766.1	1.300e-102	53.89	Atypical/RIO/RIO2 protein kinase [Phytophthora par...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL021	nonsL021	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR020	ncniR020	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR067	ngnoR067	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002710	NSK002710	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO20G01740.1	NO20G01740.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|631523	gene_6393	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100052g1	gene8373	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO20G01740.1	NO20G01740.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO20G01740 ID=NO20G01740|Name=NO20G01740|organism=Nannochloropsis oceanica|type=gene|length=1735bp
AACCACAGGGGCCGCGACCGCCAGCCGAAATTGCGTGAAAGACCTCCCAC
CCTCCTCTACCGGTTCGACCTCCCCACCAACAAATCCATGAAGCTGGACG
TGACGTGCATGCGGTACCTCTCCAAGGACGACTACCGTGTCCTGACGGCC
GTGGAAATGGGTATGAAGAACCACGACGTGGTGCCCGTGGAGCTGATTGT
CAACATTGCCAAGCTCCGGCATGGCGGTGCGCAGAAGTTTCTCAATACCT
TACTGCGGTTCAAGCTCATTTACAACGATAAGACCACCTATGACGgtagg
tgcttgcgtgtgacatttgagggaggctatgatttggatgtgattgggcg
tgtgcaattgctattttgggcctgggatatacaatgtcgtccgtcggagc
ttcggcatcgtcatcatctcacccatcttgttgtcttttcccttcacagG
CTATCGACTAACCTACGGCGGGTATGATATACTGGCACTCAAGACTTTCT
ATGCACGGGGGCACATTTCAGGGgtgagtatattgaaggcggattgatag
gacggcgaggagctgggaataggagagaactgagcacacctattcaagca
agcaagcaaacaaacaccttctcacagactcccctctttccgtctcgttc
tgctctcataagGTGGGTCAAAAAGTCGGTGTCGGCAAAGAATCCGATAT
CTATGTCGCGCAAACCGAGAGCGGGGACGAGGTCATCCTCAAATTCCACC
GCCTGGGCCGGGTCTCCTTCCGCGCCGTCAAAAACAAGCGCGACTACCTG
CAGCACCGCAAGTCGGCCTCCTGGCTTTACATGTCCCGCCTGGCCGCCTT
GCGTGAGTTTGCATTTATGAAGGCATTGCATACCAACGGCTTCCCGACCC
CTATCCCCATCGATCAAAATCGACACGTTGTGCTCATGTCGCGCGTTGAG
GGCTTTCCTATGTTTCAGGTGAAGCAAGGCAACATGGCAGAGCCAGAGAA
GGTCTTCCCTGTCTGTATCGATTTAATTGTCCGCATGGCCAGGCGGGGGC
TGGTGCATTGTGATTTCAATGAGTTCAACCTGATGATCGATGAGGGGGGA
AGGGTGACCCTCATCGACTTTCCGCAAATGATCTCGACCTCCCACATCAA
CGCCAAGGAAATGTTCGAGCGGGACGTGAGCGGCGTGGTGAAGTTCTTCG
CGATGAAGATGCACTATGTTCCCGAAGATTGCGAGATCCCAAAATTTGAA
GATATTCTGGCGGAGGCCCAGGCGGCGCAGGCGGCACGCGCGACGAGAAT
AGTAACAACGGCGAAGGAAGGGGAGGAGGGAGGGAGCGGCGGAGGGAAGG
GAGGGGAAGGGATGTGGAATTTGGACGAGGCGGTGAAGGCGAGTGGATAT
AAGGCGTCAGCTAAGGAGGAGGCAAGGTTTTTGGAGGTCTTCGAGGCGGA
GAGGAGGAGGAATGGGCCAGAAACGGGGGAATCTGCGGAGGAGGAAGAGG
AGGAGGAGGAGGATTTTGAAGAGGATTTTGAGGAGGAGGGGGATGAGGAG
GATTATAAAGAGGAGGACGAGGAGGAGGGCTATGAGGAGGAGGAGAAAGA
GGGGTTGGAAAAAAGAGCTGGTGGTGAGGAGGTGTTGGGGAGAGGAGAGA
GGACTCGTGAGGGGACAGAGAGATAGAGTAGAGGCGGGGACCATCTGTAA
ACAAAAAAAGAAAGCAAATGAGAGTGCGTGGCAGC

protein sequence of NO20G01740.1

>NO20G01740.1-protein ID=NO20G01740.1-protein|Name=NO20G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQK
FLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVG
VGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLY
MSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQG
NMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQM
ISTSHINAKEMFERDVSGVVKFFAMKMHYVPEDCEIPKFEDILAEAQAAQ
AARATRIVTTAKEGEEGGSGGGKGGEGMWNLDEAVKASGYKASAKEEARF
LEVFEAERRRNGPETGESAEEEEEEEEDFEEDFEEEGDEEDYKEEDEEEG
YEEEEKEGLEKRAGGEEVLGRGERTREGTER*

Synonyms

Publications