NO20G01740, NO20G01740 (gene) Nannochloropsis oceanica

Overview
NameNO20G01740
Unique NameNO20G01740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1735
Alignment locationchr20:527199..528933 -

Link to JBrowse

Properties
Property NameValue
DescriptionRio kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:527199..528933 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004674protein serine/threonine kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR036390WH_DNA-bd_sf
IPR015285RIO2_wHTH_N
IPR000687RIO_kinase
Homology
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: EWM22057.1 (rio kinase [Nannochloropsis gaditana])

HSP 1 Score: 541.6 bits (1394), Expect = 2.200e-150
Identity = 260/296 (87.84%), Postives = 280/296 (94.59%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMHYVPEDCEIPKFEDILAEA 297
            MKLDVTCMRY+SKDD+RVLTAVEMGMKNHDVVPVEL++ IAKLRHGG QKFL+TLLRFKL+Y+DKTTYDGYRLT+GGYDILALKT  ARGHISGVGQKVGVGKESDIYVAQTE G+EVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALRE+AFMKALH+NGFPTP PIDQNRHVVLMSRV+GFPMFQVKQGNMAEPE++FPVC+DLIVRMARRGLVHCDFNEFNLM+DE G VTLIDFPQMISTSH NA+EMFERDV  VVKFFAMKMHYVP + E+P FE +L EA
Sbjct:    1 MKLDVTCMRYMSKDDFRVLTAVEMGMKNHDVVPVELLIKIAKLRHGGVQKFLSTLLRFKLVYHDKTTYDGYRLTFGGYDILALKTLLARGHISGVGQKVGVGKESDIYVAQTEEGEEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREYAFMKALHSNGFPTPTPIDQNRHVVLMSRVKGFPMFQVKQGNMAEPERIFPVCMDLIVRMARRGLVHCDFNEFNLMVDEAGAVTLIDFPQMISTSHANAREMFERDVQCVVKFFAMKMHYVPGEDEVPDFEMVLREA 296
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: CBN77739.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 429.1 bits (1102), Expect = 1.600e-116
Identity = 200/296 (67.57%), Postives = 245/296 (82.77%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMHYVPEDCEIPKFEDILAEA 297
            +KLDVTCMR+LSK D RVLTAVEMGMKNHD+VPVELI +IAKLRHGG  + L+TLL FKLI +D+++YDGYRLTY GYDILAL    ARGHI  VG K+G+GKE+DIY+AQT  GD+V+LK HRLGR SF+AVKNKRDYL+ R S SWLYMSRL+AL+EFAFM AL  +GFPTP P+D NRHVVLMS  +G+PM+Q++ G M  P+ V+  C+++IVR+AR GL+HCDFNEFNL++DE  R+TLIDFPQM+ST H+NA EMF+RDV+ VVKFF+MKM +VPE  +IP F D +  A
Sbjct:    2 VKLDVTCMRHLSKHDIRVLTAVEMGMKNHDLVPVELISSIAKLRHGGTHRILSTLLTFKLIAHDRSSYDGYRLTYSGYDILALNVLQARGHICAVGSKIGMGKEADIYMAQTPDGDQVVLKLHRLGRTSFKAVKNKRDYLKSRTSVSWLYMSRLSALKEFAFMTALFQHGFPTPTPLDHNRHVVLMSHAKGYPMYQLRSGEMGHPDVVYRQCVEMIVRLARHGLIHCDFNEFNLLVDEEERLTLIDFPQMVSTRHVNAGEMFDRDVACVVKFFSMKMKHVPEPSDIPSFADAVGGA 297
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: OQR81317.1 (RIO kinase [Thraustotheca clavata])

HSP 1 Score: 389.8 bits (1000), Expect = 1.100e-104
Identity = 184/299 (61.54%), Postives = 241/299 (80.60%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VL AVEMGMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+HRK  +W Y+S+L+A++E AF+KAL+  GFPTP PID NRH ++MS V+G+P+ QV++  MA+ +  +  C+D++VR+A  GLVHCDFNEFN+MI++ G++T+IDFPQMISTSH NA+E+F RDV G+VKF++   H  Y+P+  E+PK  DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLNAVEMGMKNHEIVPVELISSIAKLRHGGVSKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKHRKQVNWFYLSKLSAMKENAFLKALYERGFPTPTPIDANRHAIVMSLVDGYPLNQVRR--MADSKGAYDACMDIVVRLAECGLVHCDFNEFNIMINDEGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFYSRLQHGSYIPD--EVPKLGDIVRDAE 295
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_012210287.1 (atypical/RIO/RIO2 protein kinase [Saprolegnia parasitica CBS 223.65] >KDO19000.1 atypical/RIO/RIO2 protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 386.7 bits (992), Expect = 9.300e-104
Identity = 183/299 (61.20%), Postives = 241/299 (80.60%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VLTAVE+GMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+ +K  +W Y+S+L+A++E AF++AL+  GFPTP PID NRH ++MS V+GFP+ QV++  MA  +  +  C+D++VR+A  GLVHCDFNEFN+M+++ G++T+IDFPQMISTSH NA+E+F RDV G+VKFF+   H  YVP+  E+PK +DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLTAVELGMKNHEIVPVELISSIAKLRHGGVNKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKTKKQVNWFYLSKLSAMKENAFLRALYERGFPTPTPIDANRHAIVMSLVDGFPLNQVRR--MANSKDAYDNCMDIVVRLAECGLVHCDFNEFNIMMNDAGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFFSRLQHGSYVPD--EVPKLQDIVRDAE 295
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_008614246.1 (Atypical/RIO/RIO2 protein kinase [Saprolegnia diclina VS20] >EQC32305.1 Atypical/RIO/RIO2 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 386.0 bits (990), Expect = 1.600e-103
Identity = 182/299 (60.87%), Postives = 243/299 (81.27%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VLTAVE+GMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+ +K  +W Y+S+L+A++E AF++AL+  GFPTP PID NRH ++MS V+GFP+ QV++  MA+ ++ +  C+D++VR+A  GLVHCDFNEFN+M+++ G++T+IDFPQMISTSH NA+E+F RDV G+VKFF+   H  YVP+  E+P+ +DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLTAVELGMKNHEIVPVELISSIAKLRHGGVSKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKTKKQVNWFYLSKLSAMKENAFLRALYERGFPTPTPIDANRHAIVMSLVDGFPLNQVRR--MADSKEAYDNCMDIVVRLAECGLVHCDFNEFNIMMNDTGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFFSRLQHGSYVPD--EVPQLQDIVRDAE 295
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: OQR85602.1 (RIO kinase [Achlya hypogyna])

HSP 1 Score: 385.6 bits (989), Expect = 2.100e-103
Identity = 181/299 (60.54%), Postives = 240/299 (80.27%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKMH--YVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+KD ++VLTAVE+GMKNH++VPVELI +IAKLRHGG  K L+ LLR KLI +D TTYDG++LTY GYD LAL+ F   GHISG+G+++GVGKESDIY+A    G EV +KFHRLGR SFRAVKNKRDYL+ +K  +W Y+S+L+A++E AF++AL+  GFPTP PID NRH ++MS V+G+P+ QV++  M + +  +  C+D++VR+A  GLVHCDFNEFN+MI++ G++T+IDFPQMISTSH NA+E+F RDV G+VKFF+   H  Y+P+  E+PK  DI+ +A+
Sbjct:    1 MKLDVTGMRYLTKDHFKVLTAVELGMKNHEIVPVELISSIAKLRHGGVNKILSHLLRNKLIAHDGTTYDGFKLTYMGYDFLALRVFMKHGHISGLGRQIGVGKESDIYMAVQPDGTEVAIKFHRLGRTSFRAVKNKRDYLKTKKQVNWFYLSKLSAMKENAFLRALYERGFPTPTPIDANRHAIVMSLVDGYPLNQVRR--MTDSKDAYDACMDIVVRLAECGLVHCDFNEFNIMINDAGKITMIDFPQMISTSHYNAEELFNRDVQGLVKFFSRLQHGSYIPD--EVPKLADIVRDAE 295
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_009515849.1 (hypothetical protein PHYSODRAFT_260476 [Phytophthora sojae] >EGZ28574.1 hypothetical protein PHYSODRAFT_260476 [Phytophthora sojae])

HSP 1 Score: 384.8 bits (987), Expect = 3.500e-103
Identity = 197/360 (54.72%), Postives = 251/360 (69.72%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNLDEAVKASGYKASAKEEARFLEVFEAER 359
            MKLDVT MRYL+K+ +RVLTA+EMGMKNH+VVPVELI +IAKLRHGG QK L+ LLR KLI +D   YDG+RLTY GYD LAL+ F  RGHI G+G+++GVGKESDIY+A  E G EV +KFHRLGR SFRAVK+KRDYL++RKSASW YMSRL+A++E+AF+KAL+   FPTP PID NRH + MS VEG+ + QV++  +A  +  +   + ++VR+A  GLVHCDFNEFN+MI E G++T+IDFPQMISTSH NA E+F+RDV G+VKFF+      Y P+   +PK +DI+A+                                   LDE V+ASGY     E+   L +F A +
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEVVPVELIASIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGFRLTYNGYDYLALRVFLQRGHIVGLGRQIGVGKESDIYLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLKNRKSASWFYMSRLSAMKEYAFLKALYDRDFPTPTPIDCNRHAICMSLVEGYTLNQVRR--LANSKDAYDTAMSIVVRLAEYGLVHCDFNEFNIMIGEDGKITMIDFPQMISTSHPNASELFDRDVHGLVKFFSRLQAGAYTPD--RVPKLKDIVADENV-------------------------------RLDEDVEASGYGKEFGEQVHDLSIFSAHQ 325
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: XP_002906727.1 (RIO kinase [Phytophthora infestans T30-4] >EEY66128.1 RIO kinase [Phytophthora infestans T30-4])

HSP 1 Score: 384.8 bits (987), Expect = 3.500e-103
Identity = 195/360 (54.17%), Postives = 254/360 (70.56%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNLDEAVKASGYKASAKEEARFLEVFEAER 359
            MKLDVT MRYL+++ +RVLTA+EMGMKNH+VVPVELI +IAKLRHGG QK L+ LLR KLI +D   YDGYRLTY GYD LAL+ F  RGHI+G+G+++GVGKESDIY+A  E G EV +KFHRLGR SFRAVK+KRDYL++RKSASW YMSRL+A++E+AF+KAL+   FPTP PID NRH + MS V+G+P+ QV++  +A  +  +   + ++VR+A  GLVHCDFNEFN+MI + G++T+IDFPQMISTSH NA E+F+RDV G+VKFF+      Y P+   +PK +DI+A+                                  +LDE V+ASG+     E+   L +F A +
Sbjct:    1 MKLDVTAMRYLTREHFRVLTAIEMGMKNHEVVPVELISSIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGYRLTYNGYDYLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLKNRKSASWFYMSRLSAMKEYAFLKALYDRDFPTPTPIDCNRHAICMSLVDGYPLNQVRR--LANSKDAYDTAMSIVVRLAEYGLVHCDFNEFNIMIGDDGKITMIDFPQMISTSHPNAAELFDRDVHGLVKFFSRLQGGAYTPD--RVPKLQDIVADENV-------------------------------HLDEDVEASGFGKEFGEKVHDLSIFSAHQ 325
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: GAY02271.1 (Atypical/RIO/RIO2 protein kinase [Pythium insidiosum])

HSP 1 Score: 383.3 bits (983), Expect = 1.000e-102
Identity = 183/299 (61.20%), Postives = 238/299 (79.60%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQ 298
            MKLDVT MRYL+K+ +RVLT++EMGMKNH+VVPVELI +IAKLR GG  K L+ LLR KLI +D +TYDG+RLTY GYD LAL+ F  R HI G+G+++GVGKESDI++A  E G EV +KFHRLGR SFRAVK+KRDYL++RKS SW YMSRL+A++EFAF+KALH  GFPTP PID NRH + MS V+G+P+ QV++  +A    V+   + ++VR+A  GLVHCDFNE+NLM+ + G+VT+IDFPQMISTSH NA+E+F+RDV+G+VKFF+      Y P+   +P+ EDI+A+ +
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTSIEMGMKNHEVVPVELITSIAKLRQGGINKILSHLLRNKLIAHDGSTYDGFRLTYSGYDYLALRVFLERNHIVGLGRQIGVGKESDIFLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLRNRKSVSWFYMSRLSAMKEFAFLKALHARGFPTPTPIDHNRHAICMSLVDGYPLSQVRR--LANSRDVYDEAMSILVRLAECGLVHCDFNEYNLMVSDTGKVTMIDFPQMISTSHPNARELFDRDVNGLVKFFSRLQGGAYTPD--SVPRLEDIIADGE 295
[Close]
BLAST of NO20G01740 vs. NCBI_GenBank
Match: ETK83766.1 (Atypical/RIO/RIO2 protein kinase [Phytophthora parasitica] >ETO72388.1 Atypical/RIO/RIO2 protein kinase [Phytophthora parasitica P1976] >ETP41596.1 Atypical/RIO/RIO2 protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 382.9 bits (982), Expect = 1.300e-102
Identity = 194/360 (53.89%), Postives = 252/360 (70.00%), Query Frame = 0 
Query:    1 MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQKFLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVGVGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLYMSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQGNMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQMISTSHINAKEMFERDVSGVVKFFAMKM--HYVPEDCEIPKFEDILAEAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNLDEAVKASGYKASAKEEARFLEVFEAER 359
            MKLDVT MRYL+K+ +RVLTA+EMGMKNH+VVPVELI +IAKLRHGG QK L+ LLR KLI +D   YDG+RLTY GYD LAL+ F  RGHI+G+G+++GVGKESDIY+A  E G EV +KFHRLGR SFRAVK+KRDYL++RKS SW YMSRL+A++E+AF+KAL+   FPTP PID NRH + MS V+G+P+ QV++  +A  +  +   + ++VR+A  GLVHCDFNEFN+MI + G++T+IDFPQMISTSH NA E+F+RDV G+VKFF+      Y P+   +PK +DI+A+                                   LDE V+ASG+     E+   L +F A +
Sbjct:    1 MKLDVTAMRYLTKEHFRVLTAIEMGMKNHEVVPVELITSIAKLRHGGVQKILSHLLRNKLIAHDGNAYDGFRLTYNGYDYLALRVFLQRGHITGLGRQIGVGKESDIYLATQEDGTEVAIKFHRLGRTSFRAVKSKRDYLKNRKSVSWFYMSRLSAMKEYAFLKALYDRDFPTPTPIDCNRHAICMSLVDGYPLNQVRR--LANSKDAYDTAMSIVVRLAEYGLVHCDFNEFNIMIGDDGKITMIDFPQMISTSHPNAAELFDRDVHGLVKFFSRLQGGAYTPD--RVPKLKDIVADENV-------------------------------RLDEDVEASGFGKEFGEKVHDLSIFSAHQ 325
The following BLAST results are available for this feature:
BLAST of NO20G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22057.12.200e-15087.84rio kinase [Nannochloropsis gaditana][more]
CBN77739.11.600e-11667.57conserved unknown protein [Ectocarpus siliculosus][more]
OQR81317.11.100e-10461.54RIO kinase [Thraustotheca clavata][more]
XP_012210287.19.300e-10461.20atypical/RIO/RIO2 protein kinase [Saprolegnia para... [more]
XP_008614246.11.600e-10360.87Atypical/RIO/RIO2 protein kinase [Saprolegnia dicl... [more]
OQR85602.12.100e-10360.54RIO kinase [Achlya hypogyna][more]
XP_009515849.13.500e-10354.72hypothetical protein PHYSODRAFT_260476 [Phytophtho... [more]
XP_002906727.13.500e-10354.17RIO kinase [Phytophthora infestans T30-4] >EEY6612... [more]
GAY02271.11.000e-10261.20Atypical/RIO/RIO2 protein kinase [Pythium insidios... [more]
ETK83766.11.300e-10253.89Atypical/RIO/RIO2 protein kinase [Phytophthora par... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002710NSK002710Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01740.1NO20G01740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631523gene_6393Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100052g1gene8373Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01740.1NO20G01740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01740 ID=NO20G01740|Name=NO20G01740|organism=Nannochloropsis oceanica|type=gene|length=1735bp
AACCACAGGGGCCGCGACCGCCAGCCGAAATTGCGTGAAAGACCTCCCAC
CCTCCTCTACCGGTTCGACCTCCCCACCAACAAATCCATGAAGCTGGACG
TGACGTGCATGCGGTACCTCTCCAAGGACGACTACCGTGTCCTGACGGCC
GTGGAAATGGGTATGAAGAACCACGACGTGGTGCCCGTGGAGCTGATTGT
CAACATTGCCAAGCTCCGGCATGGCGGTGCGCAGAAGTTTCTCAATACCT
TACTGCGGTTCAAGCTCATTTACAACGATAAGACCACCTATGACGgtagg
tgcttgcgtgtgacatttgagggaggctatgatttggatgtgattgggcg
tgtgcaattgctattttgggcctgggatatacaatgtcgtccgtcggagc
ttcggcatcgtcatcatctcacccatcttgttgtcttttcccttcacagG
CTATCGACTAACCTACGGCGGGTATGATATACTGGCACTCAAGACTTTCT
ATGCACGGGGGCACATTTCAGGGgtgagtatattgaaggcggattgatag
gacggcgaggagctgggaataggagagaactgagcacacctattcaagca
agcaagcaaacaaacaccttctcacagactcccctctttccgtctcgttc
tgctctcataagGTGGGTCAAAAAGTCGGTGTCGGCAAAGAATCCGATAT
CTATGTCGCGCAAACCGAGAGCGGGGACGAGGTCATCCTCAAATTCCACC
GCCTGGGCCGGGTCTCCTTCCGCGCCGTCAAAAACAAGCGCGACTACCTG
CAGCACCGCAAGTCGGCCTCCTGGCTTTACATGTCCCGCCTGGCCGCCTT
GCGTGAGTTTGCATTTATGAAGGCATTGCATACCAACGGCTTCCCGACCC
CTATCCCCATCGATCAAAATCGACACGTTGTGCTCATGTCGCGCGTTGAG
GGCTTTCCTATGTTTCAGGTGAAGCAAGGCAACATGGCAGAGCCAGAGAA
GGTCTTCCCTGTCTGTATCGATTTAATTGTCCGCATGGCCAGGCGGGGGC
TGGTGCATTGTGATTTCAATGAGTTCAACCTGATGATCGATGAGGGGGGA
AGGGTGACCCTCATCGACTTTCCGCAAATGATCTCGACCTCCCACATCAA
CGCCAAGGAAATGTTCGAGCGGGACGTGAGCGGCGTGGTGAAGTTCTTCG
CGATGAAGATGCACTATGTTCCCGAAGATTGCGAGATCCCAAAATTTGAA
GATATTCTGGCGGAGGCCCAGGCGGCGCAGGCGGCACGCGCGACGAGAAT
AGTAACAACGGCGAAGGAAGGGGAGGAGGGAGGGAGCGGCGGAGGGAAGG
GAGGGGAAGGGATGTGGAATTTGGACGAGGCGGTGAAGGCGAGTGGATAT
AAGGCGTCAGCTAAGGAGGAGGCAAGGTTTTTGGAGGTCTTCGAGGCGGA
GAGGAGGAGGAATGGGCCAGAAACGGGGGAATCTGCGGAGGAGGAAGAGG
AGGAGGAGGAGGATTTTGAAGAGGATTTTGAGGAGGAGGGGGATGAGGAG
GATTATAAAGAGGAGGACGAGGAGGAGGGCTATGAGGAGGAGGAGAAAGA
GGGGTTGGAAAAAAGAGCTGGTGGTGAGGAGGTGTTGGGGAGAGGAGAGA
GGACTCGTGAGGGGACAGAGAGATAGAGTAGAGGCGGGGACCATCTGTAA
ACAAAAAAAGAAAGCAAATGAGAGTGCGTGGCAGC
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protein sequence of NO20G01740.1

>NO20G01740.1-protein ID=NO20G01740.1-protein|Name=NO20G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MKLDVTCMRYLSKDDYRVLTAVEMGMKNHDVVPVELIVNIAKLRHGGAQK
FLNTLLRFKLIYNDKTTYDGYRLTYGGYDILALKTFYARGHISGVGQKVG
VGKESDIYVAQTESGDEVILKFHRLGRVSFRAVKNKRDYLQHRKSASWLY
MSRLAALREFAFMKALHTNGFPTPIPIDQNRHVVLMSRVEGFPMFQVKQG
NMAEPEKVFPVCIDLIVRMARRGLVHCDFNEFNLMIDEGGRVTLIDFPQM
ISTSHINAKEMFERDVSGVVKFFAMKMHYVPEDCEIPKFEDILAEAQAAQ
AARATRIVTTAKEGEEGGSGGGKGGEGMWNLDEAVKASGYKASAKEEARF
LEVFEAERRRNGPETGESAEEEEEEEEDFEEDFEEEGDEEDYKEEDEEEG
YEEEEKEGLEKRAGGEEVLGRGERTREGTER*
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Synonyms
Publications