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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr20 | genome | chr20:479667..483479 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO20G01560 vs. NCBI_GenBank
Match: EWM22087.1 (hypothetical protein Naga_100039g10 [Nannochloropsis gaditana]) HSP 1 Score: 443.0 bits (1138), Expect = 1.900e-120 Identity = 276/605 (45.62%), Postives = 365/605 (60.33%), Query Frame = 0
Query: 136 RIRVSLTSATIGGPVPS-DDEYRASNGEGEWFLGKYTGKIFRRGAKHLLGLVSDESKRRKDGAPVVGTLTLTFKGTRGL--------------GGENGVLNPYFEVWCEGTKRLIKPKVSQ-NGEVGEKDGGGDGSRAARSLAHPHRDKEWRETWLQFEVTDITTDVHVLLLDKRPLRTLTIGRLILPLPNFLGYHQPFPPRTSAFDLLAAKLIDGGRRPKTTQQLLSQKYVPQMKQYSSSSRLY--LEEWVVGQVILEVALNTPHNLFRTYLASRPLLADSFNTPRPSTSXXXXXXXXXXXXXXXXXXXDLTIQNVNLRVLAINIFRLKKALLPSSLQLLLLDYPLFFLVIVTYLFVVPTWALPLNLALLILLNGALTNSSPSFSFSSTFPSSIPLEFCXXXXXXXXXXXXXXHPIEFWPHRLVERVLQMEAYSAPKKIRRLINLVRWTQDFLGIISSLLERASYLLSWADPHVTLPMAFFVIAVALLMSLLLYVISPVVVAWCVLVWVYFQVR-RRINEMKDGVTDDGAAQGGVKELRKVINEEEDKEADGMELFSGMVEVNEKKGWVGDASK--SFILNILARTPDALDLIHRGIARQRVHE 720
R+ SL + I V + + + A+ G WF GKY K+FRRGAK LLGLV++E+++R D A VG LTL FKG + L GG +G+LNPYFEVWCEGTKRLIKPK Q + E G GGD + L +P D W+ET L F+VTDITTDVH+LLLDKRPLRTL +GRLILPLPNFLG P PP TS FDL+A ++I+ G+RP T Q LLSQKY PQMK SS S + + + VVGQV+LEVAL T H+LF TYLASRPL ADSF++ STS + T+QNV++R LAIN+FR+KKAL L LLD+P+FF +V+YL P W LPL++ LL NG T + SF ST SS+P IE+WP LVERV +ME+ SA K+RRL +RW QD LG+++SLLER +++ +W DPHVTLP+ + ++SL+LY I ++ WCV+V +Y ++R +R+ + V G KE R+ + ++A +VN K +G + + + N+ ARTPDAL+++HR IAR +H+
Sbjct: 62 RVNYSLRNEQIKVAVQAGEGDSFAARQVGGWFPGKYAEKLFRRGAKRLLGLVNEENQQRHDEAITVGKLTLIFKGAKKLGKGGRRARLEENQGGGGSGILNPYFEVWCEGTKRLIKPKAFQDSSEGGVGVEGGDWTPV--GLPYPDTDPAWQETALHFDVTDITTDVHILLLDKRPLRTLPVGRLILPLPNFLGCRHPLPPETSVFDLVATEMIECGQRPATYQALLSQKYAPQMKVASSPSSILPAINDGVVGQVVLEVALETSHDLFNTYLASRPLRADSFSS--GSTSSRVGAEEPAPASEIKAAAEEPTLQNVDIRQLAINVFRIKKALEAPPLLFYLLDHPIFFFPLVSYLVFAPLWTLPLHVCLLPFFNGIFTARNAVPSFLSTDSSSLP-------------SSTSFPSIEYWPPGLVERVQEMESSSARTKLRRLRTALRWLQDHLGLVASLLERCTFIFNWEDPHVTLPVTAGIAVGTSVLSLMLYFIPIKILIWCVVVSLYMKMRKKRLESSLEMVQTKGIHVHETKEKRERRATCDLRQAGDTPGVEEAPKVN-CKALLGSSRRLSTVTSNVFARTPDALEVLHRRIARGYMHK 648
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01560 ID=NO20G01560|Name=NO20G01560|organism=Nannochloropsis oceanica|type=gene|length=3813bp
CACCTATTATCGATCATTATCATTAATTTTTGAGTTGTTTTGTTTGTATG
AAATTGTTCTTCCCTCTGATTGAAACATAGGCAGACATAACTTGACACTC
AAGGAATTATATTTTAATACTTTAAAGGGCCGGCCCCGGTTGTTGTGCTT
TTGTGCACTGGCAACAATACTTTGTAGTAGCACCACTAACGGAGGCTGGC
TGACTGGAGGCTACTTATTCACATTTTGTCATAATCCACATGCAAAAGCT
GTGCATTACACACACGATAGCACACGTGAGAAGGGAATCCCCACACACAT
TTTTTTAAAAAGCAGCGACAGTTGATCGGGACAGGTTAATGTTGCACGAG
GAAGCGGGGCGCGAGGCCTGGGGAGTGGGCGCTTGTTGCGGTTCGACGCG
GCACGCTGTGACGATGGAGGTGGTTGGCAGCGGCGTCACAGTCGAGGGCA
GCAAGGATGTTTGCTGCTTTTGTCTTTGGGGCAACAGCATCGATTTGTCC
TCGCACTGCGGACCCATGAAGTAAACGGTCCCTACCGCTGCCAAGGCGAT
ACACAGGACGAGGCCCAGCAGACACAACGCATTGGAAATGACGCTTGCAG
TGGTCGGGATGCGGAGCAGGGTGTCCTGGATGATCTGATGGCGCAACATC
GTTGTATTGTGTACCGAAAGTGCGTTTGTGGTCTGTGTTTTGTGGTTGCG
AGTGGGTTAGAAGAGTGAGTTTAAATATGAAAAGGAGGTCGAATGTCGCG
TTGTTGGCTTCCCAGCATGGTCAAGCGAACTAAGAGCGTTACGAGCTGGA
TGACCTTAGATTAGAAATCAATACAAACGCGCTACTGCATCATGTGGGAA
TCGTGTGGAGGTCGTGTGCGGGAGGGAGGGCAGAGCGGCTAAGCGAGGAG
ATCGATGAGACGACGACCCACAGGCAAGCAAGAACAATCATGCAAGAAGT
AAAACGGACGCACCATCTTGATGACACATGAAGACTAGGACGTAAAAAAT
TGCATCACGCACCATTTTTTCAAATGCTCTATGAATGCCACACCAACACT
TTAATGGCCTGGATAGCTTGAGATAAGGCATGCCTGCCATGGATGCTGTG
AAAGTTACATGTAGCTTGGGTGGGCCCATGAGCGCTCGTACTCGCCGAGA
CCCGGCGAGCGATTGCTTCAAGCACTACTCAACGCCCACCGCTACATCCA
CTACGCTGTGAAAGTAAAGCCCTCCGGCTCTAACCTCATACCCCTCCTCC
GCAGAAGCGTCAAGAAACGTCACAATTTTCCAGCGGGTGTCACAGCTATG
TCGTCCCTTTGTCCCTCGCCCATTTCGAGCGACGATCACACCAAGGACCG
GCAGCAGCCGCGCACATGTCTCCCTACCAACAACCTCGCCGTCACAATCA
GATCCTCTGCTGCTTTTACTGGAGGCGGCGGGGTGATCGACTCGGCAGGT
TGGCGGCCCGGCACGATGATTGACCCTGTCAAAGAGAGAGGCACGGAGCG
TCAACAGCAGGAGCAGGAGCAGCTACTCCAGCAGCAAAAAGATCGACAGA
AGCAACAGCAGCAGCAGCAGCAGCAGCGGCAGGAGGAACATGAATACAAC
GAGGAAAAGAAAGCGAATAAGGACATGGAGGAAAATCATGCGGAGGAACG
CGAAGATAGTAGTGTTGACGCGCCCTCCCGACGACGAGTCAGATTCAGAG
AGAGGATCCGCGTCAGTCTCACGTCCGCCACAATCGGCGGTCCAGTACCC
TCTGACGATGAGTATAGGGCCAGTAATGGCGAGGGAGAGTGGTTTTTAGG
CAAGTATACAGGCAAGATTTTTCGTCGTGGCGCCAAGCATTTGTTGGGGT
TGGTGAGTGATGAAAGTAAGCGCAGGAAGGACGGAGCGCCGGTGGTAGGG
ACGTTAACTCTGACGTTCAAGGGCACTCGAGGTTTGGGAGGAGAGAATGG
GGTGTTGAATCCGTATTTTGAAGTGTGGTGTGAGGGGACCAAGAGGCTGA
TTAAGCCTAAAGTTTCACAAAATGGAGAAGTTGGAGAAAAGGACGGAGGA
GGAGATGGTAGCCGTGCTGCTAGATCCTTAGCGCATCCTCATAGAGATAA
GGAGTGGAGGGAGACTTGGCTTCAGTTTGAAGTTACGGACATCACGACAG
ATGTGCACGTGTTGTTGCTGGACAAGgtatattgatgtggttatgctgtt
ggctggtgattggagacaaagattagacggggcgatagttgtgtcccagt
cctcgtcgtgtacgttgtttgcatgcgtgtcagtctcactttattcctga
caatccaactctcattccacgcacatcaaaacaaacatgaaacacaaatc
gtagCGACCTCTCCGGACACTCACCATCGGCCGCCTCATTCTTCCTCTTC
CCAACTTCCTGGGCTACCACCAACCTTTCCCTCCCCGCACCTCTGCGTTC
GACCTACTCGCCGCCAAGCTCATTGATGGCGGCCGTCGCCCTAAAACCAC
CCAGCAACTCCTCTCCCAAAAATATGTGCCGCAAATGAAGCAATACTCCT
CCTCCTCACGCCTTTACTTGGAAGAGTGGGTGGTGGGTCAAGTCATTCTA
GAGGTCGCGCTCAATACGCCCCACAACCTCTTCCGCACCTACCTCGCCTC
CCGCCCTCTCCTGGCGGACAGTTTCAATACGCCTCGTCCTTCTACCTCTG
CAACGACAACAGCGGCTTTTGAGAAAACAGCAGCCGCAGCCGCAGCCACA
GCAGCAGATTTAACAATCCAGAACGTGAATTTACGAGTCCTTGCCATCAA
CATATTTCGCCTAAAAAAAGCCCTCCTCCCCTCTTCGCTTCAACTCCTTC
TCCTCGACTACCCGCTCTTCTTCCTTGTTATTGTCACTTATCTCTTCGTC
GTCCCCACATGGGCCCTTCCCCTTAACCTAGCTCTCCTTATCCTGCTCAA
TGGTGCCCTTACTAACTCTTCCCCCTCTTTCTCTTTCTCGTCCACCTTCC
CATCCTCCATCCCACTGGAATTCTGCCCCTCCACTCCACCTTCTTCTATC
CCTCCCTCTTCCTCCCCGCACCCTATTGAATTCTGGCCCCACCGGCTGGT
CGAGCGAGTCCTTCAAATGGAAGCATATTCTGCGCCCAAGAAAATCCGCC
GACTCATCAATCTTGTCCGTTGGACGCAAGATTTTTTAGGCATTATCTCA
TCCCTCTTAGAACGAGCCTCGTACCTCCTCTCCTGGGCCGATCCACATGT
GACTTTGCCCATGGCGTTTTTCGTGATCGCGGTAGCGTTGTTGATGAGTT
TGCTCTTGTATGTGATTTCGCCAGTGGTGGTAGCGTGGTGTGTATTAGTG
TGGGTGTATTTTCAGGTCCGAAGGCGGATAAATGAAATGAAAGATGGTGT
TACAGATGATGGGGCAGCGCAAGGGGGAGTCAAAGAATTGAGAAAGGTAA
TAAATGAAGAAGAAGATAAAGAAGCAGACGGAATGGAGTTATTCTCTGGG
ATGGTTGAGGTAAATGAGAAGAAGGGTTGGGTAGGAGATGCTTCAAAATC
GTTTATACTCAATATTTTAGCTAGGACACCGGATGCTTTGGATTTAATAC
ATCGAGGAATCGCTCGGCAGCGAGTACACGAACTCCAAAGGCAGATATTG
AGTGATAGTCATGATGACCGTGCGATGAGTGAGCGTCGCAAGGTGGATTA
AATCCATTGATGGGATTGCTGTTGGTTGGGATGAAGTCGAGAGTTGGTGG
TAGGTAGAACAGTCTAGGACACCAACTCGAATGAGTAGGATAGATCTCCT
TCCTGGAAGAAAC back to topprotein sequence of NO20G01560.1 >NO20G01560.1-protein ID=NO20G01560.1-protein|Name=NO20G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MSSLCPSPISSDDHTKDRQQPRTCLPTNNLAVTIRSSAAFTGGGGVIDSA
GWRPGTMIDPVKERGTERQQQEQEQLLQQQKDRQKQQQQQQQQRQEEHEY
NEEKKANKDMEENHAEEREDSSVDAPSRRRVRFRERIRVSLTSATIGGPV
PSDDEYRASNGEGEWFLGKYTGKIFRRGAKHLLGLVSDESKRRKDGAPVV
GTLTLTFKGTRGLGGENGVLNPYFEVWCEGTKRLIKPKVSQNGEVGEKDG
GGDGSRAARSLAHPHRDKEWRETWLQFEVTDITTDVHVLLLDKRPLRTLT
IGRLILPLPNFLGYHQPFPPRTSAFDLLAAKLIDGGRRPKTTQQLLSQKY
VPQMKQYSSSSRLYLEEWVVGQVILEVALNTPHNLFRTYLASRPLLADSF
NTPRPSTSATTTAAFEKTAAAAAATAADLTIQNVNLRVLAINIFRLKKAL
LPSSLQLLLLDYPLFFLVIVTYLFVVPTWALPLNLALLILLNGALTNSSP
SFSFSSTFPSSIPLEFCPSTPPSSIPPSSSPHPIEFWPHRLVERVLQMEA
YSAPKKIRRLINLVRWTQDFLGIISSLLERASYLLSWADPHVTLPMAFFV
IAVALLMSLLLYVISPVVVAWCVLVWVYFQVRRRINEMKDGVTDDGAAQG
GVKELRKVINEEEDKEADGMELFSGMVEVNEKKGWVGDASKSFILNILAR
TPDALDLIHRGIARQRVHELQRQILSDSHDDRAMSERRKVD* back to top
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