NO20G01520, NO20G01520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01520 vs. NCBI_GenBank
Match: EWM22074.1 (atp-dependent clp proteolytic subunit [Nannochloropsis gaditana]) HSP 1 Score: 498.0 bits (1281), Expect = 2.400e-137 Identity = 254/286 (88.81%), Postives = 266/286 (93.01%), Query Frame = 0 Query: 81 MRAVILLVAAFVLVTVGEAFITPAARFNPVSSSVASSKKTVMMSSPDLWYPGMKWDGRGLRMSPDQEPEVDPRRKEEPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPALLW 367 MR VI L+A +L GEAFI P AR + A ++KT+MMSSP+LWYPGMKWD RG+RM+PDQEPEVDPRRK+EPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVAN+LVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSH+ KPTMPAL W Sbjct: 1 MRTVIPLLATVMLAVAGEAFIAPTARL--PRAPRADARKTLMMSSPNLWYPGMKWDSRGMRMAPDQEPEVDPRRKDEPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANVLVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHVPKPTMPALFW 284
BLAST of NO20G01520 vs. NCBI_GenBank
Match: CBN79074.1 (chloroplast clp protease P [Ectocarpus siliculosus]) HSP 1 Score: 357.1 bits (915), Expect = 6.700e-95 Identity = 186/266 (69.92%), Postives = 212/266 (79.70%), Query Frame = 0 Query: 103 PAARFNPVSSSVASSKKTVMMS---SPDLWYPGMKWDGRGLRMSPDQEPEVDPRRKEEPKPERF-PVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 PA R + A + + M +P WYP + SPD PEVDPRRK PVR+PV++ Q+DV+SRLLKDRILLLGQQV+DEVAN+LVAQLLYLA +D +KDITLYINSPGGSVSAG+AIYDAMQ+VPCDV+TVCFG AASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILF+RSLLNSY++EY QP DKIQ+DCDRDFFMTPEEA+ YG+ID +VTTKTSH+ KP MP+L Sbjct: 27 PALRQRSSHGAAARATSALSMKAGPNPKTWYP----HSVSMMPSPDDPPEVDPRRKXXXXXXXAPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPDKDITLYINSPGGSVSAGMAIYDAMQYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFIRSLLNSYMAEYCDQPADKIQDDCDRDFFMTPEEAMDYGLIDEVVTTKTSHIAKPAMPSL 288
BLAST of NO20G01520 vs. NCBI_GenBank
Match: XP_009040284.1 (hypothetical protein AURANDRAFT_38757 [Aureococcus anophagefferens] >EGB04929.1 hypothetical protein AURANDRAFT_38757 [Aureococcus anophagefferens]) HSP 1 Score: 357.1 bits (915), Expect = 6.700e-95 Identity = 191/285 (67.02%), Postives = 224/285 (78.60%), Query Frame = 0 Query: 81 MRAVILLVAAFVLVTVGEAFITPAARFNPVSSSVASSKKTVMMSSPDLWYPGMKWDGRGLRM-SPDQEPEVDPRRKEEPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 MRA++L A V AF+ P +A S +++ SSP + G+K M SPD PEVDPRR++ KP PVR+P+++T GQ+DV+SRLL+DRILLLG+ VDDEVAN+LVAQLLYLA +D KDITLYINSPGGSVSAG+AIYD MQFVPCDV+TVCFG AASMGAFLLGAGAKGKRRSLPN+RIMIHQPLGGAQGQAADIEIQAKEILFVR LN++ISEYTGQP+DKI+EDCDRDFFM PEEA++YG+ID +V TKTSH+ P MP L Sbjct: 1 MRALLLAYAGVV-----TAFVQPRL--------IALSASSLIKSSP-IARSGIKLSAAPTMMPSPDDPPEVDPRRRDPEKPSIPPVRMPMVDTGDGQMDVISRLLRDRILLLGRGVDDEVANVLVAQLLYLANDDPTKDITLYINSPGGSVSAGMAIYDTMQFVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFVRQQLNTFISEYTGQPMDKIEEDCDRDFFMCPEEALSYGLIDEVVKTKTSHIAMPPMPEL 271
BLAST of NO20G01520 vs. NCBI_GenBank
Match: GAX20150.1 (ATP-dependent Clp protease, protease subunit [Fistulifera solaris]) HSP 1 Score: 354.4 bits (908), Expect = 4.300e-94 Identity = 177/225 (78.67%), Postives = 203/225 (90.22%), Query Frame = 0 Query: 142 MSPDQ-EPEVDPRRKE-EPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 M PD+ +PEVDPRRK+ + KP PVR+P+I+T+ GQ+DV+SRLLKDRILLLGQ VDDEVAN+LVAQLLYLA ED +KDITLYINSPGGSVSAG+AIYD MQ+VPCDV+TVCFGMAASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILF+R +LN+YI++Y GQP DKI+ DCDRDFFMTPEEAV YG+ID +V TKTSH+ KP MP L Sbjct: 36 MMPDEPQPEVDPRRKDPDDKPPTNPVRMPMIDTEKGQMDVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPKKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIADYCGQPKDKIEADCDRDFFMTPEEAVDYGIIDEVVKTKTSHITKPPMPVL 260
BLAST of NO20G01520 vs. NCBI_GenBank
Match: GAX13171.1 (ATP-dependent Clp protease, protease subunit [Fistulifera solaris]) HSP 1 Score: 354.4 bits (908), Expect = 4.300e-94 Identity = 177/225 (78.67%), Postives = 203/225 (90.22%), Query Frame = 0 Query: 142 MSPDQ-EPEVDPRRKE-EPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 M PD+ +PEVDPRRK+ + KP PVR+P+I+T+ GQ+DV+SRLLKDRILLLGQ VDDEVAN+LVAQLLYLA ED +KDITLYINSPGGSVSAG+AIYD MQ+VPCDV+TVCFGMAASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILF+R +LN+YI++Y GQP DKI+ DCDRDFFMTPEEAV YG+ID +V TKTSH+ KP MP L Sbjct: 36 MMPDEPQPEVDPRRKDPDDKPPTNPVRMPMIDTEKGQMDVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPKKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIADYCGQPKDKIEADCDRDFFMTPEEAVDYGIIDEVVKTKTSHITKPPMPVL 260
BLAST of NO20G01520 vs. NCBI_GenBank
Match: OEU15216.1 (protease subunit of ATP-dependent Clp protease [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 354.0 bits (907), Expect = 5.600e-94 Identity = 176/218 (80.73%), Postives = 197/218 (90.37%), Query Frame = 0 Query: 148 PEVDPRRKE-EPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 PEVDPRRK + +P PVR+PVI+T +GQ+DVLSRLLKDRILLLGQ VDDEVAN+LVAQLLYLA ED EKDITLYINSPGGSVSAG+AIYD MQ++PCDV+TVCFGMAASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILF+R +LN+YI+EY QP DKI+EDCDRDFFMTPEEAV YG+ID +V TKTSH+ KP MP L Sbjct: 6 PEVDPRRKNPDEQPPSAPVRMPVIDTDSGQMDVLSRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAIYDTMQYIPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIEEDCDRDFFMTPEEAVEYGIIDEVVKTKTSHITKPDMPTL 223
BLAST of NO20G01520 vs. NCBI_GenBank
Match: EJK64740.1 (hypothetical protein THAOC_14495 [Thalassiosira oceanica]) HSP 1 Score: 332.0 bits (850), Expect = 2.300e-87 Identity = 175/287 (60.98%), Postives = 213/287 (74.22%), Query Frame = 0 Query: 81 MRAVILLVAAFVLVTVGEAFITPAARFNPVSSSVASSKKTVMMSSPDLWYPGMKWDGRGLRMSPDQEPEVDP---RRKEEPKPERFPVRLPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 M+ + ++ A L V + F S++A+ K++M L G M P +P+ R+ + +P R PVR+PV+++ Q DV+SRLL+DRI+LLGQ VDDE+AN+LVAQLLYLA ED KDITLYINSPGGSVSAG+AIYD MQ+VPCDV+TVCFGMAASMGAFLLGAGA GKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILF+R +LN+YI+EY GQP DKI+ DCDRDFFMT EEAV YG+ID ++TTKTSH+ KP MP L Sbjct: 1 MKVLSVISAGTALAAVADGFSLTMNGAPAGRSALAAQYKSIMSIHSGLSSGGGSRMAYPTMMPPPTDPDXXXXXRRKNPDEQPSRGPVRMPVVDSDGSQKDVISRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCGQPKDKIEADCDRDFFMTAEEAVDYGIIDEMITTKTSHITKPPMPIL 287
BLAST of NO20G01520 vs. NCBI_GenBank
Match: KOO33225.1 (ATP-dependent clp protease proteolytic subunit [Chrysochromulina sp. CCMP291]) HSP 1 Score: 325.1 bits (832), Expect = 2.800e-85 Identity = 162/237 (68.35%), Postives = 197/237 (83.12%), Query Frame = 0 Query: 135 WD-GRGLRMSPDQEPEVDPRRKEEPKP---ERFPVR-LPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPALLW 367 WD RGL M+PD++PE+DPRRK P P ER P+ LP + + ++DV+SRLL+DRILLLG QVDDEV N+LVAQLLYLA ED+ KD+TLYINSPGGSVSAG+AI+D M FVPCD+ TVCFG AASMGAFLLGAG KGKRRSLPN+RIMIHQPLGGAQGQA DIEIQAKEILF+R+LL YI++YTGQP++K+++DCDRDFFMTPEEA YG+ID ++++K + P P L++ Sbjct: 21 WDASRGLYMAPDEDPEIDPRRKNPPSPPSRERRPLAPLPTVGSGDDKVDVISRLLRDRILLLGSQVDDEVGNVLVAQLLYLANEDQRKDMTLYINSPGGSVSAGMAIFDTMNFVPCDINTVCFGTAASMGAFLLGAGTKGKRRSLPNSRIMIHQPLGGAQGQATDIEIQAKEILFIRALLCEYIADYTGQPVEKVEDDCDRDFFMTPEEAKDYGIIDEVLSSKV-RIPTPARPELMF 256
BLAST of NO20G01520 vs. NCBI_GenBank
Match: XP_002184857.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43593.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 319.3 bits (817), Expect = 1.500e-83 Identity = 157/188 (83.51%), Postives = 173/188 (92.02%), Query Frame = 0 Query: 177 IDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 +DV+SRLLKDRILLLGQ VDDEVAN+LVAQLLYLA ED EKDITLYINSPGGSVSAG+AIYD MQ+VPCDV+TVCFGMAASMGAFLLGAGAKGKRR+LPN+RIMIHQPLGGAQGQAADIEIQAKEILF+R +LN+YI+EY QP DKI+ DCDRDFFMTPEEAV YG+ID +V TKTSH+ KP MP L Sbjct: 1 MDVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIEADCDRDFFMTPEEAVEYGIIDEVVKTKTSHIVKPEMPIL 188
BLAST of NO20G01520 vs. NCBI_GenBank
Match: XP_002295284.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87350.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 318.2 bits (814), Expect = 3.400e-83 Identity = 156/198 (78.79%), Postives = 176/198 (88.89%), Query Frame = 0 Query: 167 LPVIETQTGQIDVLSRLLKDRILLLGQQVDDEVANILVAQLLYLAQEDKEKDITLYINSPGGSVSAGLAIYDAMQFVPCDVATVCFGMAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQAKEILFVRSLLNSYISEYTGQPIDKIQEDCDRDFFMTPEEAVAYGMIDSIVTTKTSHLKKPTMPAL 365 +PV++ T Q DVLSRLL+DRI+LLGQ VDDE+AN+LVAQLLYLA ED KDITLYINSPGGSVSAG+AIYD MQ+VPCDV+TVCFGMAASMGAFLLGAGA GKRR+LPNARIMIHQPLGGAQGQAADIEIQAKEILF+R +LN+YI+EY QP DKI+ DCDRDFFMT EEAV YG+ID ++ TKTSH+ KP MP L Sbjct: 1 MPVVDDGTSQKDVLSRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNARIMIHQPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIEADCDRDFFMTAEEAVDYGIIDEMIVTKTSHITKPPMPIL 198 The following BLAST results are available for this feature:
BLAST of NO20G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01520 ID=NO20G01520|Name=NO20G01520|organism=Nannochloropsis oceanica|type=gene|length=2394bpback to top protein sequence of NO20G01520.1 >NO20G01520.1-protein ID=NO20G01520.1-protein|Name=NO20G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bpback to top Synonyms
Publications
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